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16 protocols using dako dab chromagen

1

Necropsy and Immunohistochemical Analysis of EBOV

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination, immersion-fixed in 10% neutral buffered formalin, and processed for histopathology as previously described16 (link),17 (link). For immunohistochemistry, specific anti-EBOV immunoreactivity was detected using an anti-EBOV VP40 protein rabbit primary antibody (Integrated BioTherapeutics) at a 1:4000 dilution. In brief, tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories) at 1:200 followed by Dako LSAB2 streptavidin-HRP (Dako). Slides were developed with Dako DAB chromagen (Dako) and counterstained with hematoxylin. Non-immune rabbit IgG was used as a negative control. Liver, adrenal gland, and inguinal lymph nodes representative images were taken at 40×, and spleen taken at 20× from control animal 0805068 (A, E, H, and M) or treated animals 0902056 (B, F, J, and N), 1005445 (C, G, K, and O), and 1006421 (D, H, L, and P).
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2

Immunohistochemical Detection of ZEBOV

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination, immersion-fixed in 10% neutral buffered formalin, and processed for histopathology as previously described21 . For immunohistochemistry, specific anti-ZEBOV immunoreactivity was detected using an anti-ZEBOV VP40 protein rabbit primary antibody (Integrated BioTherapeutics, Inc.) at a 1:4000 dilution. In brief, tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories) at 1:200 followed by Dako LSAB2 streptavidin-HRP (Dako). Slides were developed with Dako DAB chromagen (Dako) and counterstained with hematoxylin. Nonimmune rabbit IgG was used as a negative control.
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3

Immunohistochemical Detection of LASV

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Tissue sections were deparaffinized and rehydrated through xylene, graded ethanols, and then processed for IHC using the Thermo Autostainer 360 (ThermoFisher, Kalamazoo, MI). Slides were treated with Proteinase K for 5 min to unmask antigens (Dako, Carpenteria, CA #S3020) followed by sequential 15-min incubations with avidin D and biotin solutions (Vector, Burlingame, CA) to block endogenous biotin reactivity. Specific anti-LASV immunoreactivity was detected using an anti-LASV NP primary antibody (Zalgen Labs, Frederick MD #CLD4) at a 1:1,000 dilution for 60 min. Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories, Burlingame, CA #BA-1000) at 1:200 for 30 min followed by Horseradish Peroxidase Streptavidin, R.T.U (Vector) for 30 min. Slides were developed with Dako DAB chromagen (Dako, Carpenteria, CA #K3468) for 5 min and counterstained with hematoxylin for 30 s.
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4

Immunohistochemical Analysis of Nipah Virus

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination and were immersion-fixed in 10% neutral buffered formalin for at least 21 days in BSL-4. Subsequently, formalin was changed; specimens were removed from BSL-4, processed in BSL-2 by conventional methods and embedded in paraffin and sectioned at 5-μm thickness as previously described33 (link). Briefly, for IHC, specific anti-NiV immunoreactivity was detected using an anti-NiV N protein rabbit polyclonal primary antibody28 (link) (kindly provided by Dr Christopher Broder, Uniformed Services University of the Health Sciences, Bethesda, MD) at a 1:5,000 dilution for 30 min. The tissue sections were processed for IHC using the Dako Autostainer (Dako, Carpinteria, CA). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories, Burlingame, CA) at 1:200 for 30 min followed by Dako LSAB2 streptavidin-HRP (Dako) for 15 min. Slides were developed with Dako DAB chromagen (Dako) for 5 min and counterstained with haematoxylin for 1 min. Non-immune rabbit IgG was used as a negative staining control.
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5

Immunohistochemical Detection of ZEBOV

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination, immersion-fixed in 10% neutral buffered formalin, and processed for histopathology as previously described21 . For immunohistochemistry, specific anti-ZEBOV immunoreactivity was detected using an anti-ZEBOV VP40 protein rabbit primary antibody (Integrated BioTherapeutics, Inc.) at a 1:4000 dilution. In brief, tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories) at 1:200 followed by Dako LSAB2 streptavidin-HRP (Dako). Slides were developed with Dako DAB chromagen (Dako) and counterstained with hematoxylin. Nonimmune rabbit IgG was used as a negative control.
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6

Immunohistochemical Detection of Nipah Virus

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination and were immersion-fixed in 10% neutral buffered formalin for at least 21 days in BSL-4. Subsequently, formalin was changed; specimens were removed from BSL-4, processed in BSL-2 by conventional methods and embedded in paraffin and sectioned at 5 μm thickness. For immunohistochemistry, specific anti-NiV immunoreactivity was detected using an anti-NiV N protein rabbit primary antibody (kindly provided by Dr. Christopher Broder) at a 1:5,000 dilution for 30 minutes. The tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako, Carpinteria, CA). The secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories, Burlingame, CA) at 1:200 for 30 minutes followed by Dako LSAB2 streptavidin-HRP (Dako) for 15 minutes. Slides were developed with Dako DAB chromagen (Dako) for 5 minutes and counterstained with hematoxylin for one minute. Non-immune rabbit IgG was used as a negative staining control.
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7

Profiling NMT1 and NMT2 Expression in Breast Cancer

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All human tissues were obtained after review and approval of our local research ethics committee, protocol ETH #25928. Tissue microarrays from participants in the BCIRG 001 clinical trial [16 (link)] were obtained. The TMA slides contained formalin-fixed paraffin embedded triplicate core tissue samples (1.0 mm in diameter) from each tumor pretreatment. 5 micron thick TMA slices were deparaffinized, rehydrated, and antigen retrieval performed with 0.05% citraconic anhydride epitope retrieval buffer (details in Supplementary Methods). Overnight primary antibody incubation with NMT1 mAb 6F8D5 (1:100) and the NMT2 mAb 6C5E8 (1:1000) was followed by Dako Envision + HRP labeled secondary antibody for 1 h at room temperature. Slides were then stained with Dako DAB + chromagen, 1% CuSO4, and haematolyxlin. Omitting primary antibody served as a negative control in all experiments.
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8

Histopathological and IHC Analysis of Necropsy Tissues

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Necropsy was performed on all subjects. Tissue samples from major organs were collected for histopathological and IHC examination, immersion fixed in 10% neutral buffered formalin, and processed for histopathologic analysis as previously described [11 (link), 12 (link)]. For IHC analysis, specific anti-ZEBOV immunoreactivity was detected using an anti-ZEBOV VP40 protein rabbit primary antibody (Integrated BioTherapeutics) at a 1:4000 dilution. Tissue sections were processed for IHC analysis, using the Dako Autostainer (Dako). Secondary antibody used was biotinylated goat anti-rabbit immunoglobulin G (IgG; Vector Laboratories) at 1:200 followed by Dako LSAB2 streptavidin–horseradish peroxidase (Dako). Slides were developed with Dako DAB chromagen (Dako) and counterstained with hematoxylin. Nonimmune rabbit IgG was used as a negative control.
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9

Immunohistochemical Analysis of Nipah Virus

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination and were immersion-fixed in 10% neutral buffered formalin for at least 21 days in BSL-4. Subsequently, formalin was changed; specimens were removed from BSL-4, processed in BSL-2 by conventional methods and embedded in paraffin and sectioned at 5 μm thickness as previously described [33 (link)]. Briefly, for immunohistochemistry, specific anti-NiV immunoreactivity was detected using an anti-NiV N protein rabbit polyclonal primary antibody [28 (link)] (kindly provided by Dr. Christopher Broder, Uniformed Services University of the Health Sciences, Bethesda, MD) at a 1:5000 dilution for 30 minutes. The tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako, Carpinteria, CA). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories, Burlingame, CA) at 1:200 for 30 minutes followed by Dako LSAB2 streptavidin-HRP (Dako) for 15 minutes. Slides were developed with Dako DAB chromagen (Dako) for 5 minutes and counterstained with hematoxylin for one minute. Non-immune rabbit IgG was used as a negative staining control.
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10

Necropsy and Immunohistochemical Analysis of EBOV

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Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical examination, immersion-fixed in 10% neutral buffered formalin, and processed for histopathology as previously described16 (link),17 (link). For immunohistochemistry, specific anti-EBOV immunoreactivity was detected using an anti-EBOV VP40 protein rabbit primary antibody (Integrated BioTherapeutics) at a 1:4000 dilution. In brief, tissue sections were processed for immunohistochemistry using the Dako Autostainer (Dako). Secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories) at 1:200 followed by Dako LSAB2 streptavidin-HRP (Dako). Slides were developed with Dako DAB chromagen (Dako) and counterstained with hematoxylin. Non-immune rabbit IgG was used as a negative control. Liver, adrenal gland, and inguinal lymph nodes representative images were taken at 40×, and spleen taken at 20× from control animal 0805068 (A, E, H, and M) or treated animals 0902056 (B, F, J, and N), 1005445 (C, G, K, and O), and 1006421 (D, H, L, and P).
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