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Openlab image analysis software

Manufactured by PerkinElmer

OpenLab image analysis software is a tool designed for processing and analyzing digital images. It provides various functionalities to support image-based research and data extraction.

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5 protocols using openlab image analysis software

1

Visualizing Androgen Receptor Translocation

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Example 33

This example details the use of immunocytochemistry to visualize AR translocation.

In order to determine the extent to which the compounds of the present invention can inhibit AR translocation from the cytoplasm to the nucleus after addition of the synthetic androgen R1881, LNCaP cells were treated with either DMSO, 1 nM R1881, 10 μM bicalutamide, followed by 1 nM R1881, or 10 μM Compound 11, followed by 1 nM R1881. LNCaP cells were incubated on cover slips in phenol red-free RPMI 1640, with 10% charcoal-stripped FBS, and 1% antimycotic-antibiotic solution, for three days at 37° C. Cells were then treated with DMSO, bicalutamide or Compound 11 for three hours, followed by treatment with R1881 for three hours. After fixation and permeabilization, cells were stained, fluorescence images were obtained using a Leica® fluorescence microscope, and nuclear to cytoplasmic ratios of AR staining intensity were obtained using OpenLab® image analysis software (Perkin Elmer, Waltham, Mass.). Compound 11 was markedly more active than bicalutamide in inhibiting R1881-induced AR translocation to the nucleus (FIG. 7).

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2

Visualizing Androgen Receptor Translocation

Check if the same lab product or an alternative is used in the 5 most similar protocols

Example 33

This example details the use of immunocytochemistry to visualize AR translocation.

In order to determine the extent to which the compounds of the present invention can inhibit AR translocation from the cytoplasm to the nucleus after addition of the synthetic androgen R1881, LNCaP cells were treated with either DMSO, 1 nM R1881, 10 μM bicalutamide, followed by 1 nM R1881, or 10 μM Compound 11, followed by 1 nM R1881. LNCaP cells were incubated on cover slips in phenol red-free RPMI 1640, with 10% charcoal-stripped FBS, and 1% antimycotic-antibiotic solution, for three days at 37° C. Cells were then treated with DMSO, bicalutamide or Compound 11 for three hours, followed by treatment with R1881 for three hours. After fixation and permeabilization, cells were stained, fluorescence images were obtained using a Leica® fluorescence microscope, and nuclear to cytoplasmic ratios of AR staining intensity were obtained using OpenLab® image analysis software (Perkin Elmer, Waltham, Mass.). Compound 11 was markedly more active than bicalutamide in inhibiting R1881-induced AR translocation to the nucleus (FIG. 7).

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3

Monitoring Autophagy in PrECs

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PrECs were infected at MOI of 1–2 with adenoviruses expressing LC3-GFP (Edick et al., 2007 (link)). Twenty-four hours later, cells were growth factor–deprived and transfected with Met or scrambled siRNA. Localization of GFP-LC3 was monitored by a standard fluorescence microscopy at 24 and 48 h posttransfection using a Nikon Eclipse TE300 fluorescence microscope and OpenLab image analysis software (ImproVision, Waltham, MA). For quantification, cells displaying at least 10 punctate spots were scored as positive for LC3II staining.
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4

Annexin V Apoptosis Assay Protocol

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Annexin V was measured using a kit obtained from Molecular Probes (Invitrogen). Cells were resuspended in annexin binding buffer (10 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, 140 mM NaCl, 2.5 mM CaCl2, pH 7.4) containing Alexa Fluor 568–conjugated annexin V and incubated in the dark for 15 min. Samples were put on ice and immediately analyzed. The extent of staining was monitored by fluorescence-activated cell sorting (FACS) using a FACSCalibur (Becton-Dickinson) and CellQuest acquisition and analysis software (Becton-Dickinson) immediately after staining. On several occasions, annexin V staining was also monitored in adherent cells using a Nikon Eclipse TE300 fluorescence microscope and quantified using OpenLab image analysis software (ImproVision).
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5

Immunohistochemical Analysis of Frozen Ovary

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Frozen ovary sections (6 µm thick) were fixed in freshly prepared 4% paraformaldehyde in PBS (pH-7.4) at 4 °C, and incubated with enzyme-specific antibodies. The signal was developed using donkey anti-rabbit-IgG-DyLight-488 and nuclei were stained with 4′,6-diamino-2-phenylindole (DAPI). The images were captured by a Leica DMR microscope (North Central Instruments, Plymouth, MN) and Openlab image analysis software (Improvision, Lexington, MA).
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