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2 protocols using fixable viability stain

1

Generation and Characterization of Gimap5 Knockout Mice

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All experiments were performed according to US National Institutes of Health guidelines and were approved by the IACUC of The Cincinnati Children’s Hospital. C57BL/6J mice were obtained from Jackson. Deletion of Gimap5 in Gimap5flox/floxCd4cre-ert2 mice was induced by the administration of tamoxifen chow (40mg/kg body weight; Harlan Laboratories Teklad Diets). Gimap5sph/sph mice were generated as previously described (6) and bred in-house in the vivarium of Cincinnati Children’s Hospital. All mice were maintained under specific pathogen-free conditions.
All antibodies used for flow cytometry were purchased from eBioscience or Biolegend unless otherwise noted. Purified α-mouse-CD3 (17A2) and α-mouse-CD28 (37.51) antibodies (Biolegend) were used for mouse T cell activation. A fixable viability stain was purchased from eBioscience. 7-AAD was purchased from BD. PMA, ionomycin, and Brefeldin A were obtained from Sigma. αIFNγ (XMG1.2) and mIL-23 were obtained from eBioscience. TGFβ1, mIL-4, and hIL-2 were purchased from Miltenyi Biotech. αIL-4, IL-6, and mIL-1β, mIL-12, and TGFβ3 were obtained from PeproTech.
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2

Isolation and Analysis of REP Monocytes

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Tissue lysates were prepared as described above and stained for 20 min at 4°C with 100 μL of fixable viability stain (eBioscience). Cells were then washed in FACS buffer (PBS containing 2 mM EDTA and 2% (v/v) FBS) and stained for 20 min at 4°C with 50 μL of antibody cocktail containing subset-specific antibodies (Table 2) diluted in Brilliant Stain Buffer (BD Biosciences). Cells were washed in FACS buffer and fixed for 20 min at 4°C in 100 μL of Fixation Buffer (BioLegend).
Stained samples were analysed on a BD LSRFortessa flow cytometer (BD Biosciences) and data analysis was performed using FlowJo software (FlowJo).
For the isolation of REP monocytes from BM for transfer experiments, cells were isolated and stained as described above. After staining, cells were analysed on a FACS Aria sorter (BD Biosciences) and resuspended in GM-CSF containing media ready for injection into the inflamed air-pouch.
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