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3 protocols using vps35

1

Comprehensive Western Blot Methodology

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Western blotting was performed as described previously [24 (link)]. The primary antibodies were as followed: β-actin (66,009–1–1 g, PROTEINTECH), Bclaf1 (26,809–1-AP, Santa Cruz Biotechnology), VPS35 (sc-374,372, Santa Cruz Biotechnology), HSF1 (sc-9144, Santa Cruz Biotechnology), Hsp70 (sc-69,705, Santa Cruz Biotechnology), Hsp90α (8165 s, Cell Signaling Technology), TSG101 (sc-7964, Santa Cruz Biotechnology), CD63 (25,682–1-AP, PROTEINTECH). The secondary antibodies (Donkey anti-mouse/rabbit IRDye 680/800) were purchased from Li-COR Biosciences (Lincoln, Nebraska, USA). Blots were scanned by LI-COR Odyssey infrared imaging system and quantified with Image J software v1.8.0.
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2

Silencing GPR177, VPS35, and ATP6V0 in MSCs

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MSCs were transfected with siRNA for GPR177, VPS35, and ATP6V0 (Santa Cruz), respectively on days 1, 4, and 7 by using the same protocol above described. Silencing was detected by western blotting after the treatments. The secreted Wnt3a in the collected medium was quantified by ELISA (USCN).
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3

Antibody Validation and Cell Line Characterization

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Recombinant human IL-6, OSM, INF-β, IFN-γ, and mouse IL-6 (Peprotech); mouse monoclonal antibodies against Flag (1:1000 for immunoblots (IB), 1:200 for immunofluorescent staining (IF)) and β-actin (1:1000 for IB) (Sigma), β-tubulin (Invitrogen, 1:1000 for IB), HA (Covance, 1:1000 for IB), PCNA (F-2, sc-25280, 1:1000 for IB) and VPS35 (B-5, sc-374372, 1:1000 for IB) (Santa Cruz Biotechnology); rabbit monoclonal antibodies against pY705-STAT3 (D3A7, 1:1000 for IB, 1:100 for IF), BCL-XL (#2764, 1:1000 for IB), c-MYC (D84C12, 1:1000 for IB), and p-P65 (S536, 1:1000 for IB) (Cell Signaling Technology); rabbit polyclonal antibodies against STAT3 (C-20, sc-482, 1:1000 for IB, 1:200 for IF) and p65 (C-20, sc-372, 1:1000 for IB) (Santa Cruz Biotechnology), JAK1 (#610232, BD, 1:500 for IB), VPS26 (ab-23892, Abcam, 1:1000 for IB), and TRIM27 (#18791, IBL, 1:500 for IB) were purchased from the indicated companies. Mouse and rabbit polyclonal antibodies against gp130 were raised against N-terminal portion of human gp130 protein.
HEK293, HeLa, HT29, and RKO cells were obtained from ATCC. For all the cells used, mycoplasma contamination was checked.
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