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318 protocols using caski

1

Cultivation of Cervical Cancer Cell Lines

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Human cervical cancer cells HeLa, CaSki, C33A, SiHa, MS751, and ME-180,and the human cervical immortalized cell line ECT1/E6E7, were purchase from the American Type Culture Collection (ATCC, Manassas, VA, USA). HCC94 and HeLa229 cell lines were obtained from Shanghai Chinese Academy of Sciences cell bank (China). HeLa, CaSki, SiHa and MS751 cells were grown in Eagle’s Minimum Essential Medium (ATCC-30-2003) supplemented with 10% fetal bovine serum (FBS, Life Technologies). HCC94 cells were grown in RPMI-1640 medium (Life Technologies, Carlsbad, CA, US) supplemented with penicillin G (100 U/ml), streptomycin (100 mg/ml) and 10% fetal bovine serum (FBS, Life Technologies). HeLa229 and ME-180 cells were grown in Dulbecco’s modified Eagle’s medium (Invitrogen) supplemented with 10% FBS.ECT1/E6E7 cells were cultured in Keratinocyte-Serum Free medium (GIBCO-BRL 17005–042) with 0.1 ng/ml human recombinant EGF, 0.05 mg/ml bovine pituitary extract, and additional calcium chloride 44.1 mg/L (final concentration 0.4 mM). All cell lines were grown under a humidified atmosphere of 5% CO2 at 37 °C.
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Culturing diverse human and murine cell lines

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HeLa (human cervical adenocarcinoma cell line), CaSki (human cervical epidermoid carcinoma cell line), A375P (human malignant melanoma), HEK293T (human embryonic kidney cell line), and C8-D1A (murine astrocyte cell line) were obtained from American Type Culture Collection (ATCC). HeLa (ATCC; CCL-2) and CaSki (ATCC; CRL-1550) were cultured in Roswell Park Memorial Institute (RPMI) 1,640 Medium (Gibco; #11875-093) supplemented with heat-inactivated 10% fetal bovine serum (FBS) (Gibco; #16000-044), and 1% penicillin (100 units/mL)/streptomycin (100 μg/mL) solution (Gibco; #15240-062). A375P (ATCC; CRL-3224), HEK293T (ATCC; CRL-3216), and C8-D1A (ATCC; CRL-2541) were cultured in Dulbecco’s Modified Eagle’s Medium (DMEM) (Gibco; #11995-065) supplemented with heat-inactivated 10% FBS (Gibco; #16000-044), and 1% penicillin/streptomycin solution (Gibco; #15240-062). All types of cells were maintained in 100-mm cell culture dishes in a humidified atmosphere of a 5% CO2 incubator at 37°C. All cells were cultured every 2 days using trypsin (Gibco; #12605-010).
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3

Culturing Primary Human Aortic Endothelial Cells

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Primary human aortic endothelial cells (HAEC, ScienCell) were plated on culture dishes pre-coated with 10 ng/ml fibronectin (Millipore) and cultured in endothelial cell medium (ECM, ScienCell) supplemented with 5% fetal calf serum (FCS), 1% endothelial cell growth supplement (ECGS), 100 units/ml penicillin, and 100 µg/ml streptomycin [40] (link). Cells were used from passages 3 to 6 in all experiments. Immortalized human umbilical vein endothelial cells (HUVEC), monocyte cell line THP1, and cervical cancer cell line Caski were purchased from ATCC (Manassas, VA) and cultured in DMEM (HUVEC, Caski), or RPMI 1640 (THP1) containing 10% FCS and antibiotics. All cells were cultured in a humidified atmosphere with 5% CO2 at 37°C.
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4

Cell Line Cultivation for Cancer Research

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Human colon cancer cell lines: SW 948 (ATCC, no. CCL-237) and SW620 (ATCC, no. CCL-227), human osteosarcoma cell lines: Saos-2 (ATCC, HTB-85) and HOS (ATCC, CRL-1543), human cervical cancer cell lines: SiHa (ATCC, HTB-35) and CaSki (ATCC, CRM-CRL-1550), human normal cells: epithelial cells of the large intestine (CoTr): CCD 841 CoTr (ATCC, CRL-1807), and osteoblasts (hFOB): hFOB 1.19 (ATCC, CRL-11372) were used in these studies. Both normal cell lines were transformed with thermo-labile virus SV-40. All cell lines, purchased from Sigma-Aldrich (St. Louis, MO, USA), were maintained in appropriate media recommended by ATCC, namely, colon cancer cell lines: L-15 medium; Saos-2 cell line: McCoy’s 5A Modified Medium; HOS and SiHa cell lines: MEM Medium; CaSki cell line: RPMI medium; hFOB cell line: 1:1 mixture of DMEM without phenol red and Ham’s F12 medium, and CoTr: DMEM Medium. All media were supplemented with fetal bovine serum (FBS), 100 U/mL penicillin, and 100 μg/mL streptomycin (Sigma Aldrich), except the medium for hFOB, which contained 0.3 mg/mL of G418. The cell cultures were cultivated in standard conditions at 37 °C, 95% humidity, and with 5% CO2, except the SW 620 cell line cultivated without CO2, and hFOB and CoTr cultivated at a permissive temperature of 34 °C.
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5

Culturing Human Cervical Cancer Cells

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The human squamous cell carcinomas of the uterine cervix, CaSki and ME-180, were obtained from the American Type Culture Collection (CaSki:ATCC® CRL-1550™ and ME-180:ATCC® HTB-33™, Manassas, VA) and cultured in RPMI 1640 medium (Fisher Scientific) with L-glutamine, containing 10% fetal bovine serum, penicillin (100IU), streptomycin (100μg/mL) and maintained in an incubator at 37˚C, 5% CO2 and 95% humidity. Monolayers were grown in standard 96-well flat bottom plates. Spheroids were created using Perfecta3D® Hanging Drop Plates (3D Biomatrix, Ann Arbor, MI) and were cultured on Corning™ Matrigel™ Membrane Matrix (Fisher Scientific) 1:1 with complete media.
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6

Cervical Cancer Cell Line Culture

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A panel of cervical cancer cell lines including SiHa and CaSki was purchased from ATCC (Supplementary Table S1). SiHa (PIK3CA-wt) and CaSki (PIK3CA-wt/PIK3CA-E545K) cell lines were cultured in MEM and RPMI (Invitrogen), respectively, supplemented with 10% (v/v) fetal bovine serum (FBS, Hyclone III, Invitrogen) and penicillin (50 units/ml) and streptomycin (50 μg/ml). HeLa cells (PIK3CA-WT) were cultured in DMEM with 5% (v/v) serum and antibiotics as above. Stable cell lines derived from parental HeLa cell line (described below and in Supplementary Material) were cultured in DMEM supplemented with 5% fetal bovine serum, streptomycin and penicillin as above and other antibiotics as indicated below. All cell lines were cultured in a humidified incubator under an atmosphere of 5% CO2 at 37°C. SiHa, CaSki and HeLa cell lines were authenticated by STR analysis by ATCC January 2016.
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7

Profiling Cervical Cancer Samples

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Twenty-seven pairs of frozen cervical tumors and matched normal tissues were provided by the Gynecologic Oncology Group Tissue Bank (Columbus, OH). All samples were included in our previous sequencing-based small RNA profiling study.6 (link) The study was approved by the local ethical committee. Seven human cervical cancer cell lines (CaSki, HeLa, SW756, ME-180, SiHa, C4I and C33A) were purchased from the American Type Culture Collection and the culture conditions were described previously.11 (link) In brief, CaSki and ME-180 cells were cultured in RPMI 1640 and the other cell lines were grown in DMEM medium, supplemented with 10% FBS. Authentications of HeLa and CaSki cells were recently verified by short tandem repeats profiling, as performed by Bio-Synthesis (Lewisville, TX).
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8

Cell Line Cultivation and Treatment

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Human CC cell lines (SiHa, CaSki, ME-180, C4-1) and human normal cervical cell line (Ect1/E6E7), from ATCC (Rockville, Maryland), were allowed to grow under 37 °C and 5% CO2 in the DMEM (Invitrogen, Carlsbad, CA). The 1% antibiotics and 10% FBS, both from Invitrogen, were acquired for purpose of cell culture. Besides, 20 mmol/l of LiCl, 10 mM of DMSO and 20 nM of C646 were all purchased from Sigma Aldrich (St. Louis, MI) to treat SiHa and CaSki cells.
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9

Sensitizing Cervical Cancer Cells

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The human cervical cancer cell lines HeLa (HPV 18-positive) and CaSki (HPV16-positive) were obtained from the ATCC (Manassas, VA). Cells were routinely tested for mycoplasma and characterized by short tandem report profiling (AmpFISTR identifier kit, Applied Biosystems, Foster, CA, cat. 4322288). HeLa and CaSki cells were transfected with siRNAs using DharmaFECT transfection reagent (Thermo Scientific, USA) according to the manufacturer's protocol. The HPV 16 and 18 siRNA sequences are listed in Table S1. Cisplatin (P4394) and paclitaxel (T7191) were obtained from Sigma-Aldrich, USA. For combination therapy, cells were exposed to E6/E7 siRNA along with chemotherapeutic agents.
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10

Cell Line Culture and Transfection

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The human embryonic kidney cell line HEK293, breast cell lines (HBL100, MCF-7, and MDA-MB-231) and cervical cancer cell lines (HeLa, CaSki, C-33A, and SiHa) were purchased from ATCC (Manassas, VA, USA). Cells were cultured in DMEM or RPMI 1640 supplemented with 10% fetal bovine serum, 100 U/ml penicillin, 100 μg/ml streptomycin, and 2 mM L-glutamine at 37 °C in a 5% CO2 incubator. Transfection was carried out using Lipofectamine 2000 according to the manufacturer’s instructions (Invitrogen, Carlsbad, CA, USA).
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