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172 protocols using lapatinib

1

Assessing Kinase Inhibitor Efficacy

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EGF was from Invitrogen; selumetinib, afatinib, lapatinib, lapatinib, gefitinib, erlotinib, SHP099 and LY3009120 were from SelleckChem; SCH772984 was from MedChem Express; PMA, nocodazol and CP-724714 were from Sigma-Aldrich; RO-3306 was from Tocris Bioscience; AMG-510 was from MedChemExpress.
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2

Establishing Lapatinib and AZD8931-Resistant Cells

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Lapatinib-resistant cells were established by culturing cells in complete medium supplemented with escalating concentrations of Lapatinib (0.04–5 μM; SelleckChem). Cells were then maintained in 5 μM Lapatinib. AZD8931-resistant cells were established by culturing cells in complete medium supplemented with escalating concentrations of AZD8931 (0.0067–0.67 μM; provided by AstraZeneca) and maintained in 0.67 μM AZD8931. Prior to drug treatment studies, the cells were grown for one week in the absence of drug.
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3

Assessing Kinase Inhibitor Efficacy

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EGF was from Invitrogen; selumetinib, afatinib, lapatinib, lapatinib, gefitinib, erlotinib, SHP099 and LY3009120 were from SelleckChem; SCH772984 was from MedChem Express; PMA, nocodazol and CP-724714 were from Sigma-Aldrich; RO-3306 was from Tocris Bioscience; AMG-510 was from MedChemExpress.
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4

Generation and Maintenance of Cell Lines

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H3122 cells were obtained from the National Cancer Institute. Generation of ceritinib-resistant H3122 cells is described in the Supplemental Experimental Procedures. H2228, HCC827, and HCC4006 were purchased from the American Type Culture Collection (ATCC). PC-9 cells were obtained from Public Health England, and KELLY neuroblastoma cells were obtained from Sigma-Aldrich. Cells were maintained in RPMI-1640 (Cellgro) with 10% fetal bovine serum (Gemini Bioproducts) and penicillin (100 units/mL) / streptomycin (100 µg/mL; Cellgro). MGH006 cells have been previously reported and were maintained in DMEM (Cellgro) with 10% fetal bovine serum, penicillin, and streptomycin (Sequist et al., 2010 (link)). All cell lines were tested to confirm the absence of mycoplasma contamination. Crizotinib, TAE684, ceritinib, erlotinib, lapatinib, and sotrastaurin were purchased from Selleck Chemicals. Blasticidin was obtained from Life Technologies. Phorbol 12-myristate 13-acetate (PMA) was purchased from Santa Cruz Biotechnology.
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5

Breast Cancer Cell Line Characterization

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MCF7, BT549, MDAMB231, MDAMB468, Hs578T, SUM159PT, BT549, and BT20 breast cancer cell lines were obtained from ATCC (Manassas, VA, USA). MCF7 cells were grown in DMEM medium, the other cell lines were grown in RPMI medium, with 10% fetal bovine serum (FBS), penicillin (100 U/mL), and streptomycin (100 µg/mL). Cells were plated 24 h before treatment with different drugs at the indicated concentrations. Recombinant human EGF, heregulin (HRG), IGF1, angiotensin II (Ang II), and angiotensin 1–7 (Ang 1–7) were obtained from Sigma Chemical Co (St. Louis, MO, USA). Recombinant HGF and FGF were from Abcam. Recombinant PDGF-BB was from Gibco. Trastuzumab, gifitinib, lapatinib, sunitinib, OSI-906, and doxorubicin were obtained from Selleck Chemicals. The PRCP inhibitor (PRCP-7414, referred to as PRCPi in text) was from Calbiochem (catalog number 504044).
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6

Chemical Compounds Used in Research

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Gentamicin sulfate, dimethyl sulfoxide (DMSO), Triton X-100 (used at 1%), mTOR inhibitor rapamycin (used at 1 μM) and bafilomycin A1 (used at 100 nM) were all purchased from Sigma-Aldrich (Merck, Darmstadt, Germany). Sapitinib (AZD8931) and lapatinib were ordered from Selleck Chemicals (Houston, TX, USA) and SignalChem (Richmond, BC, Canada), respectively. Kinase inhibitors from the published kinase inhibitor sets (PKIS)1 and PKIS2 were kindly provided by GlaxoSmithKline Global Health Medicines R&D (GSK) and the Structural Genomics Consortium of the University of North Carolina at Chapel Hill (SGC-UNC) (Elkins et al., 2016 (link); Drewry et al., 2017 (link)). Larger quantities of GW296115X were obtained from AOBIOUS (Gloucester, MA, USA). All PKIS compounds were dissolved in DMSO at 10 mM. Adenosine monophosphate-activated protein kinase (AMPK) activator compound 991 (ex229) (Xiao et al., 2013 (link)) (Spirochem, Basel, Switzerland; used at 25 μM) was kindly shared by Eline Brombacher and Dr. Bart Everts (Leiden university Medical Center, Leiden, Netherlands). Chemical structures were generated from published simplified molecular-input line-entry specification (SMILES) using ChemDraw (PerkinElmer, Waltham, MA, USA).
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7

Breast Cancer Cell Line MCF7 Treatment Protocols

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MCF7 breast cancer cell line was obtained from ATCC. MCF7 cells were grown in DMEM medium, with 10% fetal bovine serum (FBS), penicillin (100 U/mL) and streptomycin (100 µg/mL). Cells were plated 24 h before treatment with different drugs at the indicated concentrations.27 (link) Recombinant human heregulin (HRG) and IGF1 were obtained from Sigma Chemical Co (St. Louis, MO).27 (link) PRCP inhibitor (PRCP-7414); catalog number 504044 was from Calbiochem. OSI906 and lapatinib are obtained from Selleckchem.
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8

Cell Viability and Proliferation Assays

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CRC XLs were seeded at different densities (5-7 × 103 cells per well) in 100 μl complete growth medium in 96-well plastic culture plates at day 0. The following day, serial dilutions of the indicated drugs were added to the cells in serum-free medium while medium-only was included as controls. Plates were incubated at 37 °C in 5% CO2 for 5 or 6 days, after which cell viability was assessed by measuring ATP content through CellTiter-Glo Luminescent Cell Viability assay (Promega). Luminescence was measured by SPARK M10 (Tecan) plate reader. Treated wells were normalized to untreated/DMSO treated wells.
For long-term proliferation assays, cells were seeded in 24-wells plates (1-2.5 × 104 cells per well) and cultured in the absence and presence of drugs as indicated. Wells were fixed with 4% paraformaldehyde (Santa Cruz) and stained with 1% crystal violet-methanol solution (Sigma-Aldrich) after 2 weeks. All assays were performed independently at least three times.
Cetuximab and trastuzumab were obtained from the Pharmacy at Niguarda Cancer Center in Milan, Italy. Lapatinib was purchased from Selleck Chemicals.
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9

Maintenance of Breast Cancer Cell Lines

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The breast cancer cell lines MCF‐7, MDA‐MB‐231, MDA‐MB‐468 and HCC1954 were maintained in RPMI‐1640 plus GlutaMAX‐1 (Gibco) supplemented with 10% fetal calf serum (FCS) and 10 µg/ml insulin. HEK293T cells were maintained in DMEM (Gibco) plus 10% FCS. JQ1, I‐BET762 and I‐BET151 were purchased from Cayman Chemical (Ann Arbor, MI, USA). Trametinib, olaparib, palbociclib, alisertib, dasatinib, 17‐AAG, lapatinib, trastuzumab, cycloheximide (CHX) and Mcl‐1 inhibitors (S63845 and TW‐37) were commercially sourced from Selleckchem (Houston, TX, USA).
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10

Anticancer Drug Screening Protocol

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5-Fluorouracil, oxaliplatin and irinotecan were obtained from the pharmacy of the University of Campania “Luigi Vanvitelli”. Cetuximab, panitumumab, SYM004, MM151, trastuzumab, pertuzumab and duligotuzumab antibodies were kindly provided by Merck, Amgen, Symphogen, Merrimack Pharmaceuticals, Roche and Genentech, respectively. Refametinib, a selective MEK 1/2 inhibitor was kindly provided by Bayer Italy; Pictilisib, a PI3Kα inhibitor and lapatinib were purchased from Selleckchem.
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