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Esi source

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The ESI source is a key component in mass spectrometry instruments. It is responsible for the efficient ionization of analytes, enabling their detection and analysis.

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39 protocols using esi source

1

Quantification of Aconitum Alkaloids by UPLC-MS/MS

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The concentrations of aconitum alkaloids were determined by utilizing a Waters Xevo TQD-Acquity UPLC H-Class Bio system equipped with an ESI source (Thermo Finnigan, San Jose, CA, USA). The chromatographic analysis was performed on an Acquity UPLC BEH C18 column (1.7 μm, 2.1 × 50 mm2) at room temperature. The mobile phase was water containing 0.05% formic acid (phase A) and 100% acetonitrile (phase B) with a gradient elution program at a flow rate of 0.3 mL min−1, 0–1 min, 15% phase B; 1–2.5 min, 30% phase B; 2.5–4 min, 45% B; 4–4.1 min, 90% phase B; 4.1–6 min, 15% phase B. The injection volume was 10 μL and the auto-sampler temperature was maintained at 15 °C.
The mass scan mode was the positive MRM mode. For instance, the precursor ion and product ion were m/z 646 → 586 for aconitine and m/z 330 → 181 for sinomenine as internal standard, respectively. The collision energy for aconitine and internal standard were 34 eV and 30 eV, respectively. The MS/MS conditions were optimized as follows: spray voltage, 3.5 kV; ion source temperature, 150 °C; sheath gas pressure, 50 L h−1; auxiliary gas flow, 50 L min−1; capillary temperature, 400 °C.
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2

HPLC-MS/MS Metabolite Separation and Identification

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An HPLC system, consisting of Surveyor Autosampler, Surveyor LC pump, Surveyor Photo Diode Array (PDA) detector (Thermo Finnigan, Waltham, MA, USA), and a reversed-phase column (ZORBAX 300SB-C18, 2.1 × 150 mm, 3.5 μm; Agilent, Santa Clara, CA, USA) was used to separate the metabolites. 10 μL of samples were injected for the analysis throughout. The gradient profile was 8 % B for 2 min, increased to 20 % B in 38 min, then to 100 % B in 12 min and maintained for 10 min, and decreased to 8 % B in 2 min and maintained for 10 min (A = 0.1 % formic acid in water, B = 100 % acetonitrile). The flow rate was 0.15 mL/min. The acquisition time was 55 min and delay time was 5 min per spectrum. The separation was monitored at 325 nm.
An ion trap mass spectrometer (LCQ DECA XP MAX) coupled with an ESI source (Thermo Finnigan) was used to identify the metabolites. The MS parameters were the following: sheath gas (nitrogen) flow rate, 40 arb; aux/sweep gas (nitrogen) flow rate, 10 arb; spray voltage, 4.5 kV; capillary temperature, 320 °C. Collision energy and other tune parameters were optimized for dissociation of parent ions into product ions for each metabolite. The mass spectrometer was acquired in data-dependent MS/MS mode: each full MS scan (in the range 100–220 m/z) was followed by three MS/MS of selected ions.
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3

Characterization of Active Sub-Fractions by Mass Spectrometry and NMR

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The characterization of active sub-fractions was performed by high-resolution electrospray ionization mass spectrometry (HR-ESI-MS) analysis in a Qstar-QqTOF Tamdem Hybrid System with an ESI source (Applied BioSystems, Bremen, Germany). 1H, 13C, and 2D Nuclear Magnetic Resonance (NMR) spectra were recorded on a Bruker Avance 300 with a Neo Console NMR spectrometer (300 MHz for 1H, and 75 MHz for 13C) and on a Bruker Avance 500 spectrometer (500 MHz for 1H and 125 MHz for 13C). Chemical shifts (δ) are reported as parts per million (ppm) relative to CD3OD (δ 3.31 ppm for 1H NMR, δ 49.0 ppm for 13C NMR).
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4

Rapid Quantification of Methotrexate and Metabolites

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Detection was achieved using an AB Sciex QTRAP 5500 with an ESI source (Applied Biosystems, Singapore). Instrument settings and sample acquisition were controlled using Analyst software (Version 1.5, Applied Biosystems, Foster City, CA). Multiple Reaction Monitoring (MRM) and positive ion mode with unit resolution for both Q1 and Q3 were used in the detection of the analytes and ISTDs. The optimized MS/MS conditions were as follows: ion spray source temperature at 500°C, curtain gas (cur) pressure at 25 psi, gas 1 (G1) set at 40 psi, gas 2 (G2) set at 20 psi, ion spray voltage (IS) was set at 5500 V, collision-activated dissociation (CAD) was set at medium, declustering potential (DP) was 46 V, and the collision energy (CE) was set at 40 V for MTX and 20 V for the remaining analytes. The ion transitions monitored (m/z) were 455.2→308.1, 471.1→324.1, and 326.2→175.1 for MTX, 7-OHMTX, and DAMPA respectively; 458.2→311.2 and 475.2→328.3 were monitored for MTX-d3 and 13C2H3-7-OHMTX, respectively.
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5

Quantification of 2-Hydroxyglutarate Isomers

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Measurement of L-2-HG and D-2-HG was performed as described previously (Rakheja et al., 2011 (link)). Briefly, the metabolites were extracted from plasma samples and derivatized with (+)-Di-O-acetyl-L-tartaric anhydride and injected for chromatographic separation on an Agilent Hypersil ODS 4.0 3 250 mm, 5 mm column followed by detection and measurement using an API 3000 triple-quadrupole mass spectrometer equipped with an ESI source (Applied Biosystems). MRM transitions were monitored at 363.2 > 147.2 for both L-2-HG and D-2-HG.
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6

Quantification of 2-Hydroxyglutarate Isomers

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Measurement of L-2-HG and D-2-HG was performed as described previously (Rakheja et al., 2011 (link)). Briefly, the metabolites were extracted from plasma samples and derivatized with (+)-Di-O-acetyl-L-tartaric anhydride and injected for chromatographic separation on an Agilent Hypersil ODS 4.0 3 250 mm, 5 mm column followed by detection and measurement using an API 3000 triple-quadrupole mass spectrometer equipped with an ESI source (Applied Biosystems). MRM transitions were monitored at 363.2 > 147.2 for both L-2-HG and D-2-HG.
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7

Characterization of Novel Compound using NMR and LC-MS

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NMR spectra were obtained using a Bruker AVANCE III 700 NMR spectrometer (Bruker, Rheinstetten, Germany) at 700 MHz (1H) and 175 MHz (13C), with chemical shifts given in ppm. Samples were separated with an Acquity UHPLC BEH C18 column (2.1 × 100 mm i.d., 1.7 μm) at room temperature. The mobile phases comprised deionized water containing 0.2% (v/v) formic acid (A) and acetonitrile (B). Quantitative analysis of the novel compound was performed using an LTQ-Orbitrap XL mass spectrometer (Thermo Scientific, Bremen, Germany) equipped with an ESI source (Thermo Electron, Bremen, Germany) in negative ion mode with a mass range of m/z 100–1500 Da. Optimal conditions were employed as follows: capillary voltage 20 V, capillary temperature 350 °C, spray voltage 3.5 kV and tube lens voltage 110 V.
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8

Analysis of C. elegans N-Glycans by LC/MS

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The characterization of N-glycans released from C. elegans and labeled with 2-AB was carried out by LC/MS analysis on an LTQ XL linear ion trap mass spectrometer equipped with an ESI source (Thermo-Electron, San Jose, CA, USA). The mass spectrometry coupled liquid chromatography was performed using a Surveyor autosampler plus and MS pump plus (Thermo Scientific). The column used was a 1.0 mm x 15 cm, 5 µm TSK gel Amide-80 column (Tosoh Bioscience LLC, PA, USA). Solvent A was 20 mM ammonium acetate (pH 6.9) and solvent B was 100% acetonitrile. The flow rate was 40 µl/min. Initial conditions were 20% solvent A/80% solvent B. After 5 minutes solvent B was decreased from 80% to 25% over 100 minutes followed by re-equilibration for 10 minutes at initial conditions.
Mass spectrometer conditions were a spray voltage of 5.0 kV and the capillary temperature was 170°C. The sheath gas flow was set to 20.00 units. For the generation of the MSn spectra, normalized collision energies were set to 35%. The method used was triple play operated by Xcalibur software, with second scan being Zoom MS and third scan was Dependent MS/MS of most intense ion from scan event 2. The isolation width was set to 2 amu. All experiments were performed in the positive ion mode.
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9

Phytochemical Analysis of Bark Extract

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The chemical constituents of the bark extract were annotated utilizing a ThermoFinnigan LCQ-Duo ion trap mass spectrometer (ThermoElectron Corporation, Waltham, MA, USA) with an ESI source (ThermoQuest Corporation, Austin, TX, USA) as detailed in Sobeh et al. (22 (link)).
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10

Liquid Chromatography-Mass Spectrometry Analysis

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A ThermoFinnigan LCQ-Duo ion trap mass spectrometer (ThermoElectron Corporation, Waltham, MA, USA) with an ESI source (ThermoQuest Corporation, Austin, TX, USA) was utilized. A Discovery HS F5 column (15 cm × 4.6 mm ID, 5 µm particles) (Sigma-Aldrich Co Steinheim, Germany) was used with the ThermoFinnigan HPLC system. The mobile phase was water and acetonitrile (ACN) (Sigma-Aldrich GmbH, Steinheim, Germany) (0.1% formic acid each). At 0 min, ACN was 5%, then increased to 30% over 60 min. The flow rate was kept at 1 mL/min with a 1:1 split before the ESI source. The MS operated in the negative mode as previously reported [37 (link)].
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