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19 protocols using hyaluronidase h3506

1

Isolation of Testicular Single Cells

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Testes were collected in ice-cold PBS and the tunica albuginea was removed carefully. Testicular tissue was minced in 200 μl of digestion medium [1 mg/ml collagenase/dispase (10269638001, Roche), 1 mg/ml hyaluronidase (H3506; Sigma-Aldrich), 1 mg/ml DNAse I (DN-25; Sigma-Aldrich) in DMEM] until all seminiferous tubules seemed to be digested. Then 800 μl of digestion medium was added and incubated for 25 min at 37°C with slow continuous rotation. Additional mechanical disruption was performed by pipetting the solution five times using recovery tips. The suspension was filtered through a 35 mm pore size filter to achieve a single-cell suspension. The cell suspension was pipetted slowly to avoid clogging and cell damage. Cells were collected by centrifugation at 400 g for 10 min at 37°C, the supernatant was discarded, and the pellet was resuspended in 1 ml of PBS (Umer et al., 2021 (link)).
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2

Isolation of Adipose Tissue Leukocytes

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Mice were euthanized and perfused with 10 mL saline solution to remove
peripheral blood and ensure that leukocyte populations found are those residing
in the adipose tissue. Perigonadal VAT was isolated and washed with ice-cold
PBS. VAT was then minced to 2–3 mm pieces, added 4 mL of enzymatic
digestion mix and transferred to gentleMACS C-tubes (130-096-334; Miltenyi
Biotec, Bergisch Gladbach, Germany). Tissue was then dissociated using the
gentleMACS Octo Dissociator (130-095-937; Miltenyi Biotec, Bergisch Gladbach,
Germany), program name: mr_adipose_01, ran 3 times. Suspensions were
subsequently filtered with a 100 μm cell strainer, washed with ice-cold
PBS and stained for cell-sorting. Adipose enzymatic digestion mix contained 1
mg/mL bovine-serum albumin, 0.77 mg/mL Liberase (0541151001; Roche,
Indianapolis, USA), 15.8 mU Hyaluronidase (H3506; Sigma-Aldrich, St. Louis,
USA), 25 mU DNAse1 (DN25; Sigma-Aldrich, St. Louis, USA) and 1.5 μM
Ca2+ in Hanks’ Balanced Salt solution.
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3

Isolation of Adipose Tissue Leukocytes

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Mice were euthanized and perfused with 10 mL saline solution to remove
peripheral blood and ensure that leukocyte populations found are those residing
in the adipose tissue. Perigonadal VAT was isolated and washed with ice-cold
PBS. VAT was then minced to 2–3 mm pieces, added 4 mL of enzymatic
digestion mix and transferred to gentleMACS C-tubes (130-096-334; Miltenyi
Biotec, Bergisch Gladbach, Germany). Tissue was then dissociated using the
gentleMACS Octo Dissociator (130-095-937; Miltenyi Biotec, Bergisch Gladbach,
Germany), program name: mr_adipose_01, ran 3 times. Suspensions were
subsequently filtered with a 100 μm cell strainer, washed with ice-cold
PBS and stained for cell-sorting. Adipose enzymatic digestion mix contained 1
mg/mL bovine-serum albumin, 0.77 mg/mL Liberase (0541151001; Roche,
Indianapolis, USA), 15.8 mU Hyaluronidase (H3506; Sigma-Aldrich, St. Louis,
USA), 25 mU DNAse1 (DN25; Sigma-Aldrich, St. Louis, USA) and 1.5 μM
Ca2+ in Hanks’ Balanced Salt solution.
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4

Collagen Fibril Diameter Analysis in Murine Spinal Discs

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Lumbar spine discs (L4/5) and caudal spine discs (C7/8) from 4-week-old IFT80fl/fl; Col1-creERT or IFT80fl/fl mice were dissected and fixed in 2.5% (v/v) glutaraldehyde at 4 °C. The collagen fiber diameters were measured using SEM analysis as described previously (25 (link)). Briefly, the samples were digested in 20.4 U/ml hyaluronidase (H3506, Sigma) and 0.1 mg/ml bovine pancreatic trypsin (T1426, Sigma-Aldrich). The fixed samples were washed three times with PBS. The specimens were dehydrated in a graded ethyl alcohol (EtOH) series (30%, 50%, 70%, 80%, 90%, and 100%). Subsequently, specimens were dehydrated in ethanol and hexamethyldisilizane (HMDS) solutions, starting with EtOH: HMDS (1:1) and serially increasing to EtOH: HMDS (1:4), and finally washed with 100% HMDS. The samples were air dried in the fume hood for one hour. Samples were mounted on the AI-hold with super glue and coated with carbon. The FEI XL30 ESEM (FEI XL30 ESEM, FESEM Thermo Fisher, 5350 NE Dawson Creek Drive, Hillsboro, Oregon 97124 USA, voltage: 8 kV) was used for imaging. ImageJ software was used for the measurement of collagen fibril diameters. Six mice were evaluated in each group.
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5

Glucagon Secretion in Pancreatic Islets

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Pancreatic islets were isolated from Hnf1a+/+ and Hnf1a−/− mice as previously described [16 (link)]. Briefly, after bile duct cannulation and digestion of the pancreas using a mixture of 1.5 mg/mL collagenase L (Nitta Gelatin, Osaka, Japan), 1.5 mg/mL hyaluronidase (H3506; Sigma-Aldrich, St. Louis, MO), and 0.1% (v/v) protease inhibitor cocktail (Nacalai Tesque, Inc., Kyoto, Japan), isolated islets were manually collected. Islet glucagon was extracted by an acid–ethanol extraction method as previously described [17 (link)]. To assess glucagon secretion from isolated islets in vitro, size-matched islets were pre-incubated in pH 7.4 HEPES-buffered Krebs-Ringer bicarbonate solution (KRBH) buffer (120 mM NaCl, 4.7 mM KCl, 1.2 mM KH2PO4, 2.4 mM CaCl2, 1.2 mM MgCl2, 20 mM NaHCO3, and 10 mM HEPES) containing 11 mM glucose and then stimulated with KRBH buffer containing 1.1 or 5.6 mM glucose, or with 20 mM KCl for the indicated time. To examine the effect of SGLT inhibition on glucagon secretion, isolated islets were pre-incubated with 20 μM sotagliflozin for 2 h, after which a glucagon secretion assay was performed in the presence of 20 μM sotagliflozin. Glucagon concentration was determined by a mouse glucagon enzyme-linked immunosorbent assay (ELISA) kit (Mercodia AB, Uppsala, Sweden) and glucagon levels were normalized by islet number.
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6

Synovial Fluid Collection and Processing for Rheumatoid Arthritis and Osteoarthritis Studies

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The synovial fluid from RA and OA patients was obtained during consultations at the polyclinic to alleviate pressure and pain of knee joints caused by edema or swelling (synovial inflammation). All material was considered surplus material; therefore, ethical approval was not required. Procedures were performed in accordance to the Dutch code of conduct for responsible use of human tissue in medical research (https://www.federa.org/code-goed-gebruik). Written informed consent was obtained from all patients. Upon collection, the synovial fluid was centrifuged at 1,700 x g for 10 minutes at 4°C, followed by 30 minutes at 10,000 x g at 4°C to remove cells. The supernatant was aliquoted and stored at -80°C. To reduce viscosity, synovial fluid samples were thawed and treated with 75 U/ml of hyaluronidase (H3506; Sigma-Aldrich, Saint Louis, MO, USA) for 15 minutes at 37°C and subsequently centrifuged at 1,000 x g for 10 minutes at 4°C. Samples were aliquoted and stored at -20°C until further analysis.
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7

Bone Marrow and Aorta Isolation

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Before organ collection, mice were perfused with 20 ml ice-cold PBS. The epiphysis of the femurs and tibiae were opened, flushed with FACS buffer and filtered through a 40 μm cell strainer. Marrow was collected by flushing the plug out of the bones. The supernatant was removed and digested with collagenase IV (Sigma-Aldrich, C5138); dispase (Gibco by Life Technology, 17105–041) and DNase I (Thermo Scientific, 90083). Aortas were excised, minced and enzymatically digested with collagenase I (C0130), collagenase XI (C7657), DNase I (D5319) and hyaluronidase (H3506, all Sigma-Aldrich).
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8

Flow Cytometric Analysis of Testicular Germ Cells

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Four cultured testis pieces from each treatment were pooled and prepared for flow cytometric analysis as previously described by Rotgers and colleagues.21 (link) Briefly, cultured testis pieces were cut using McPherson-Vannas scissors and enzymatically digested with 1 mg/mL collagenase/dispase (10269638001, Roche, Basel, Switzerland), 1 mg/mL hyaluronidase (H3506, Sigma–Aldrich), 1 mg/mL DNAse1 (DN-25, Sigma–Aldrich). Cell suspensions were filtered, subsequently fixed and permeabilized using 4% paraformaldehyde and 90% methanol. To assess the different germ cell populations in the testicular pieces, immunolabeling with mouse anti- γH2AX-Ser139 antibody (05-636, EMD Millipore Billerica, MA, USA), which is a marker for meiosis, was performed.
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9

Disaggregation and Isolation of Tumor Cells

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After the biopsy, the patient sample was exposed to 5 mL of DMEM/F12 (11320033, ThermoFisher Scientific) with 100 units of hyaluronidase (H3506, Sigma-Aldrich), 300 units of collagenase IV (17104–019, ThermoFisher Scientific) and 125 units of DNAse I (DN25, Sigma-Aldrich). This tissue suspension was processed to two rounds of disaggregation using the hTumor1 program of a GentleMACS (Miltenyl Biotec, Madrid, Spain) followed by 30 min of incubation at 37 °C. After incubation, the suspension was filtered using a 70 µm filter, and cells were pulled down at 500 × g for 5 min. Erythrocytes were lysed using ice-cold sterile MiliQ water for 15 seconds and PBS was added to stop the process. Cells were pulled down and resuspended in complete RPMI medium, counted, and seeded in 12-well plates or the microfluidic chip to perform in parallel flow cytometry-based DBP and microfluidic-based DBP as explained before.
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10

Spermatogenic Cell Isolation Protocol

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The obstructive azoospermia patients provided the testicular puncture samples as the normal controls. The cell density-gradient centrifugation technique was performed using the STA-PUT velocity sedimentation method, as previously described [34 (link), 35 (link)]. Briefly, spermatogenic cells of humans extracted from testis biopsies undergone the first digestion using 2 mg/ml collagenase IV (17104019, Gibco) and 1 μg/μl DNase I (18047019, Invitrogen). Then secondly digested by 4 mg/ml collagenase IV, 2.5 mg/ml hyaluronidase (H3506, Sigma), 2 mg/ml trypsin (T1426, Sigma) and 1 μg/μl DNase I. Last, the samples were loaded in an STA-PUT velocity sedimentation cell separator (ProScience) for gradient separation. This method efficiently separates sperm cell populations by density, enabling the isolation and analysis of specific cell types.
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