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Agilent 6850 gas chromatograph

Manufactured by Agilent Technologies
Sourced in United States

The Agilent 6850 is a gas chromatograph designed for the separation, identification, and quantification of chemical compounds in complex mixtures. It features a temperature-programmable oven, a variety of detectors, and advanced data processing capabilities to provide reliable analytical results.

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7 protocols using agilent 6850 gas chromatograph

1

Quantifying Residual DCM in Microspheres

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The residual DCM content in the microspheres was determined with an Agilent 6850 gas chromatograph (GC; Agilent Technologies, Santa Clara, CA, USA) equipped with a flame ionization detector, a CombiPal CTC headspace sampler, and a DB-624 column (30 m × 0.53 mm, 3 µm). As carrier gas, helium with a flow of 7 mL/min was used. The split injection mode was used with a split ratio of 1:15. The initial column temperature was 40 °C maintained for 5 min and then raised (10 °C/min) to 100 °C with a hold time of 1 min. Finally, the temperature was raised to 250 °C with 50 °C/min for 4 min. The syringe and incubation temperatures were 140 °C and 120 °C, respectively. For each formulation, 100 mg of microspheres was accurately weighed in duplicate and dissolved in 5 mL DMSO with 9.4 µg/mL octane as internal standard. Then, 2 mL of the headspace layer was injected into the GC for analysis. An eight-point calibration curve was plotted using a linear fit and a 1/X weighting factor to determine the DCM concentration from the peak area.
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2

Polar Lipid and Fatty Acid Analysis of Bacterial Strain

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Polar lipid analysis was carried out by Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH (Braunschweig, Germany) services using the deposited strain V10T (=DSM 112951T). In brief, polar lipids were extracted using the modified Bligh and Dyer method (Bligh and Dyer, 1959 (link)) and separated by two-dimensional silica gel thin-layer chromatography. Total lipids were revealed by spraying molybdate-phosphoric acid with specific reagents to detect defined functional groups.
The cellular fatty acid methyl ester profile of strain V10T was determined at the CECT, Spanish Type Culture Collection (Valencia, Spain), following the protocol recommended by the MIDI Microbial Identification System (Sasser, 1990 ). The biomass of strain V10T for the fatty acid determination was obtained from a culture on MA after incubation for 72 h at 30°C. The cellular fatty acid content was analyzed by gas chromatography with an Agilent 6850 gas chromatograph and identified according to the TSBA6 method using the Microbial Identification Sherlock software package (MIDI Inc., 2012 ).
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3

Sterol Analysis by GC-MS

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For sterol MS analysis, the internal standard α‐cholestanol (0.02 mg) was added in 0.1 ml of lipid extract and the solvent was evaporated under N2 gas stream. A saponification step was performed by adding 1 ml of ethanol and 0.1 ml of 11 N KOH and incubating it for 1 h at 80 °C. After the addition of 1 ml of hexane and 2 mL of water, the sterol-containing upper phase was recovered, and the solvent was evaporated under N2 gas stream. Sterols were trimethylsilylated by N,O‐bis(trimethylsilyl) trifluoroacetamide (BSTFA)-trimethylchlorosilane for 15 min at 100 °C. After complete evaporation of BSTFA under N2 gas, derivatized sterols were dissolved in 0.1 ml of hexane and analyzed by GC-MS. GC-MS was performed using an Agilent 6850 gas chromatograph and coupled MS detector MSD 5975-EI (Agilent). An HP-5MS capillary column (5% phenyl-methyl-siloxane, 30-m, 250-mm, and 0.25-mm film thickness; Agilent) was used with helium carrier gas at 2 ml/min; injection was done in splitless mode; injector and mass spectrometry detector temperatures were set to 250 °C; the oven temperature was held at 50 °C for 1 min, then programmed with a 25 °C/min ramp to 150 °C (2-min hold) and a 10 °C/min ramp to 320 °C (6-min hold).
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4

Polar Lipid and Fatty Acid Analysis of Leeuwenhoekiella

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The polar lipid analysis of Leeuwenhoekiella sp. strain Mr9T was carried out by DSMZ services, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures (Germany), from the deposited strain L. parthenopeia Mr9T (DSM 112950). In brief, polar lipids were extracted using the modified Bligh and Dyer’s (1959) (link) method and separated by two-dimensional silica gel thin-layer chromatography. Total lipids were revealed by spraying molybdate-phosphoric acid and specific reagents to detect defined functional groups.
The composition of cellular fatty acids methyl esters was also determined following the protocol recommended by the MIDI Microbial Identification System (Sasser, 1990 ). This determination was carried out at the CECT, Spanish Type Culture Collection (Valencia, Spain). The biomass of strain Mr9T for the fatty acid determination was obtained from a culture on MA after 72 h at 30°C of incubation. The cellular content of fatty acids was analyzed by gas chromatography with an Agilent 6850 gas chromatograph and identified according to the TSBA6 method using the Microbial Identification Sherlock software package (MIDI, 2012 ).
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5

GC-MS Profiling of Hexane Extracts

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The hexane extracts were recovered from the vial after 24 h at +4 °C and processed according to Sun et al. (2020) (link): Agilent 6850 gas chromatograph, DB5 apolar capillary column (30 m x 0.25 mm), 7683B series injector, and 5973 Network mass selective detector (Agilent Technologies). Helium at a flow rate of 1.0 ml/min was used as a carrier gas with the following program: 40 °C for 3 min, gradient of 3 °C min from 40 °C to 245 °C, and 10 min at 245 °C. Injection volume was 2 µl with a split mode (split ratio 1:2) and the injector and detector temperatures were 250 °C. The parameters for mass spectrometer detector were set as follows: mass scan range 35–450 m/z, and ionization voltage 70 eV. Kovatz indexes (AI) were calculated according to Adams (2007) and to the Nist Web Book. Names and families of compounds (supplementary table S8, Supplementary Material online) were given by screening Wiley 275 and Nist 08 databases, and by names given by (Knudsen et al. 2006 ). Spearman’s correlation coefficients (supplementary table S11, Supplementary Material online) and heatmap (supplementary fig. S3, Supplementary Material online) were calculated with the R language and environment (R Core Team 2015 ) using Hmisc (Harrell and Dupont 2020 ) and corrr (Kuhn et al. 2020 ) packages.
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6

Quantitative Analysis of Hemp Essential Oils

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Eleven EO components, namely α‐pinene, β‐pinene, myrcene, limonene, 1,8‐cineole, (E)‐β‐ocimene, terpinolene, (E)‐caryophyllene, α‐humulene, caryophyllene oxide and CBD were analyzed in the EOs by GC coupled with FID. The analytical standards of these compounds were purchased from Sigma‐Aldrich (Milan, Italy) and were used to prepare the calibration curves in the range 0.005–10 mg mL−1. Before injection, 6 μL hemp EOs was diluted in 594 μL n‐hexane (LC‐MS) and 0.5 μL injected in split mode (1:30) for the analysis. An Agilent 6850 gas chromatograph equipped with an HP‐5 coated capillary column (HP‐5, 30 m length, 0.32 internal diameter, 0.25 film thickness; Agilent Technologies) was used. The injector temperature was 300 °C and hydrogen was the carrier gas, produced with a generator (PGH2‐250, DBS Analytical Instruments, Vigonza, Italy). The gas flow was set at 3.7 mL min−1. The total run time was 15.60 min. Specifically, the gas chromatograph oven temperature was held at 60 °C for 3 min, then the temperature was raised to 350 °C at 25 °C min−1 and held for 1 min. The temperature of the flame ionization detector was 360 °C, with a hydrogen and air flow of 40 and 400 mL min−1, respectively.
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7

Fatty Acid Desaturation and Elongation Analysis in Transgenic Yeast

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FAs from the transgenic yeast were analysed by preparing methyl esters (FAME) as previously described (Monroig et al., 2013) . Briefly, FAME were identified and quantified using an Agilent 6850 Gas Chromatograph coupled to a 5975 series Mass Selective Detector (MSD, Agilent Technologies, Santa Clara, CA, USA). The desaturation of potential substrates including the yeast endogenous saturated (16:0 and 18:0) and monounsaturated (16:1n-7, 18:1n-9, 18:1n-7) FA, as well as the exogenously added PUFA substrates (18:3n-3, 18:2n-6, 20:3n-3, 20:2n-6, 20:4n-3, 20:3n-6, 22:5n-3 and 22:4n-6) was calculated from the proportion of substrate (FA) converted to desaturated FA product as [product areas/(product areas+substrate area)] ×100.
Similarly, the ability of the cuttlefish Elovl cDNA for elongation of yeast endogenous
FAs and the exogenously added PUFA substrates (18:3n-3, 18:2n-6, 18:4n-3, 18:3n-6, 20:5n-3, 20:4n-6, 22:5n-3 and 22:4n-6) was calculated as described above
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