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16 protocols using cell stripper

1

Isolation and Stimulation of Peritoneal Macrophages

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Peritoneal macrophages were isolated from C57BL/6, or the indicated knockout mice 4 days after intraperitoneal injection of 1 ml, 3.85% thioglycollate and plated at a density of 1 × 106 cells/ml in DMEM containing 10% inactivated fetal serum (IFS), 50 U/ml penicillin G sodium, and 50U/ml streptomycin sulfate (pen-strep). Stimulations were performed on the day after harvest. For flow cytometry experiments, peritoneal cells were cultured on low adherence plates (Greiner Bio-One) to facilitate cell harvest. Cells were removed from low adherence plates by washing with PBS followed by 10 min with Cell Stripper (Gibco) and then 10 min with EDTA/trypsin (Sigma). Growth medium was supplemented with palmitate or stearate complexed to BSA at a 2:1 molar ratio as described previously, and BSA-supplemented media was used as control.23 (link) For cell stimulations, PBS or LPS (100 ng/ml) were added to media containing BSA or BSA-free FA complexes. HepG 2 cells were obtained from ATCC and cultured in DMEM + 10% serum.
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2

Quantifying Caspase-1 Activation and Apoptosis

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BMDMs were loaded with FLICA 660 Caspase-1 Assay (final dilution of the FLICA 660 reagent for incubation with cells was 1:300, ImmunoChemistry) after 1h of treatment with nigericin and incubated for additional 1h. Cells then were washed twice with washing buffer and harvested using Cell Stripper (GIBCO). Collected cells were centrifuged and resuspended in annexin binding buffer (10 mM HEPES, 0.14 M NaCl, 2.5 mM CaCl2, pH 7.4) containing AnnexinV-FITC (Biolegend) and LIFE/DEAD Aqua dead cell stain (Thermo Fisher) and incubated for 15 min. Cells were diluted 1:3 with annexin binding buffer and acquired with a BD CantoII. Results were acquired with the FACSDiva software (BD) and FLICA+AnnexinV+ population was quantified using FlowJo software (Tree Star).
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3

Bone Marrow-Derived Macrophage Isolation

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BMDM were prepared from 8- to 24-week-old mice. Bone marrow cells were isolated from femurs and tibias and cultured in RPMI-1640 medium supplemented with 10% heat-inactivated fetal bovine serum (FBS; Hyclone), 2 mM L-glutamine, and 100 U/mL penicillin-streptomycin (complete media; cRPMI) and mouse recombinant M-CSF (20 ng/mL, Peprotech). Fresh cRPMI containing M-CSF was added at day 4 post isolation. At the day 7 post isolation cells were non-enzymatically harvested using Cell Stripper (GIBCO) and seeded in cRPMI at concentration 8 × 105-106 cells/mL in tissue culture plates of various formats.
Sdhbfl/fl and Sdhb WT BMDMs were given a first dose of tamoxifen (600 nM, Sigma) at day 4 of differentiation and a second dose at the time of plating for experiment together with one extra dose of M-CSF. Cells then were rested for 24h before stimulation.
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4

Quantifying Caspase-1 Activation and Apoptosis

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BMDMs were loaded with FLICA 660 Caspase-1 Assay (final dilution of the FLICA 660 reagent for incubation with cells was 1:300, ImmunoChemistry) after 1h of treatment with nigericin and incubated for additional 1h. Cells then were washed twice with washing buffer and harvested using Cell Stripper (GIBCO). Collected cells were centrifuged and resuspended in annexin binding buffer (10 mM HEPES, 0.14 M NaCl, 2.5 mM CaCl2, pH 7.4) containing AnnexinV-FITC (Biolegend) and LIFE/DEAD Aqua dead cell stain (Thermo Fisher) and incubated for 15 min. Cells were diluted 1:3 with annexin binding buffer and acquired with a BD CantoII. Results were acquired with the FACSDiva software (BD) and FLICA+AnnexinV+ population was quantified using FlowJo software (Tree Star).
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5

Bone Marrow-Derived Macrophage Isolation

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BMDM were prepared from 8- to 24-week-old mice. Bone marrow cells were isolated from femurs and tibias and cultured in RPMI-1640 medium supplemented with 10% heat-inactivated fetal bovine serum (FBS; Hyclone), 2 mM L-glutamine, and 100 U/mL penicillin-streptomycin (complete media; cRPMI) and mouse recombinant M-CSF (20 ng/mL, Peprotech). Fresh cRPMI containing M-CSF was added at day 4 post isolation. At the day 7 post isolation cells were non-enzymatically harvested using Cell Stripper (GIBCO) and seeded in cRPMI at concentration 8 × 105-106 cells/mL in tissue culture plates of various formats.
Sdhbfl/fl and Sdhb WT BMDMs were given a first dose of tamoxifen (600 nM, Sigma) at day 4 of differentiation and a second dose at the time of plating for experiment together with one extra dose of M-CSF. Cells then were rested for 24h before stimulation.
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6

Quantifying OPG Binding Kinetics

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Differentiated and un-differentiated MC3T3-E1 cell layers were exposed to 1 M NaCl for 5 minutes to remove endogenous OPG, washed once in PBS and fixed with 70% ethanol for 5 minutes at 4°C. Fixed cells were exposed to various concentrations of wtOPG or OPG-XL and incubated for an additional 30 minutes at 4°C. Cell layers were washed twice with PBS and lysed with 1% Triton in PBS. OPG concentrations in cell lysates were measured with an OPG ELISA (MyBiosource). Similar experiments were performed using HEK293T cells which lack RANKL. To confirm that OPG was binding to cells and not extracellular matrix, we repeated these experiments using flow cytometry. Human AlexaFluor-647-conjugated OPG antibody (BD Biosciences) was incubated for 5 minutes at room temperature with wtOPG or OPG-XL. Cell Stripper (Invitrogen) was used to gently lift MC3T3-E1 cells from culture plates. Cells were then stained for 30 minutes at 4°C with the OPG antibody complex. Cells were washed and analyzed using a FACSAria™ Fusion SORP flow cytometer. Positive and negative populations were gated with a commercially available human recombinant OPG (Abcam). Results were analyzed using BD FACSDiva™ software.
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7

TRAIL-Induced Breast Cancer Cytotoxicity

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Cells were seeded into monolayer or suspension for 7 days, at which point the cells were isolated, using a non-enzymatic dissociation buffer (CellStripper, Invitrogen, Carlsbad, CA, USA), and re-seeded into either the tissue culture polystyrene or the Ultra-Low Attachment 96 well plates, at a concentration of 10,000 cells/well. Cells were maintained in a complete medium, overnight, prior to the TRAIL treatment. The cells were treated with the recombinant human TRAIL (TRAIL) (R&D Systems, 375-TEC), at two different doses (10 ng/mL and 100 ng/mL for MDA-MB-231 and ZR75-1 cell lines; 50 ng/mL and 500 ng/mL for MCF7 cell lines). The concentrations were based on our previous research, in which the IC50 for TRAIL treatment over 24 h was found to be 1–5 ng/mL for MDA-MB-231, 7–8 ng/mL for ZR75-1, and >500 ng/mL for MCF7 cells [37 (link)]. Plates were incubated with TRAIL over 24 h and analyzed for either viability or protein expression, at indicated timepoints.
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8

Cell Culture and Maintenance of Murine Tumor Lines

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The B16F10 mouse melanoma line was originally obtained from I. Fidler (MD Anderson Cancer Center, Houston, TX). The 4T1 mouse breast cancer cell line and CT26 colon carcinoma were purchased from ATCC (Manassas, VA). WG492 is a melanoma cell line derived from a tumor from the BRAFV600E/PTEN−/− transgenic mouse. These cells were maintained in RPMI 1640 containing 7.5% fetal bovine serum (FBS) and l-glutamine. Cells were detached using 0.25% trypsin/EDTA. For cell surface staining of tumor cells and CD8+ T cell killing assays, cells were detached non-enzymatically using Cellstripper (Invitrogen).
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9

Macrophage Engulfment of Apoptotic Cells

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Bone marrow-derived macrophages were incubated in the presence or absence of unlabeled ACs for 45 minutes at a 5:1 AC:macrophage ratio. The wells were then rinsed with PBS to remove unengulfed ACs, and the macrophages were incubated for an additional 24 hours, after which they were detached using Cell Stripper (Invitrogen) and counted using the Countess II Automated Cell Counter (Invitrogen).
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10

HER2-Targeting Affibody Molecule Binding

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SKBR3 cells were obtained from ATCC. Biotin and fluorescein conjugated Anti-HER2 Affibody Molecule (HER2-AFF-B, termed: (ZHER2:477)2) was purchased from Affibody AB, Bromma, Sweden. Dulbecco’s Phosphate Buffered Saline (DPBS), Dulbecco’s Modified Eagle’s Medium GlutaMAXTM with high glucose and pyruvate (DMEM), Fetal Bovine Serum, certified, heat inactivated (FBS), Minimum Essential Medium Non-Essential Amino Acids (NEAA) 100× solution, Phosphate Buffered Saline (PBS) 10× solution, CellStripper, Normal Goat Serum (GS), and Quantum Dot (QD) Qdot 655 Streptavidin Conjugate (Strep-QD) were from Fisher Scientific GmbH, Schwerte, Germany. D-Saccharose, Glycine, biotin free and molecular biology grade Albumin Fraktion V (BSA), and Sodium Cacodylate Trihydrate were from Carl Roth GmbH + Co. KG, Karlsruhe, Germany. Electron microscopy grade Formaldehyde (FA) 16% solution was from Science Services GmbH, Munich, Germany. HPLC grade deionized Water, 0.01% poly-L-lysine (PLL) solution (mol wt 70,000–150,000), Sodium Tetraborate, Boric Acid, and Fibronectin-like Engineered Protein Polymer-plus (FLEP), were from Sigma-Aldrich Chemie Gmbh, Munich, Germany. 35 mm-cell culture dishes with uncoated glass bottom were from Greiner bio-one, Frickenhausen, Germany (CELLviewTM four compartments), and from ibidi, Munich, Germany (μ-Dish, with imprinted 50 or 500 μm relocation grid).
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