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4 protocols using 2 bromohexadecanoic acid 2 bp

1

Comprehensive Antibody Inventory for Cell Organelle Labeling

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Anti-HA antibody (#3F10) was purchased from Roche Diagnostics; anti-CERT (#ab72536) from Abcam; chicken antibody against VAP (Kumagai et al., 2014 (link)) anti-TGOLN2/TGN46 (#A304-434A) from Bethyl Laboratories; anti-TOMM20 (#WH0009804M1) from Sigma-Aldrich; anti-Lamp2 (#sc-18822) from Santa Cruz; anti-LBPA (#z-PLBPA) from Echelon Bioscience; anti-EEA1 (#610457) from BD Transduction Laboratories; anti-catalase (#D4P7B) and anti-Rab11a (#2413) from Cell Signaling Technology; anti-Hrs (#10390-1-AP) from Proteintech; anti-GFP (#04404-84) from Nacalai Tesque, and anti-GAPDH (016-25523) from Fujifilm Wako Pure Chemical Corporation. 2-Bromohexadecanoic acid (2-BP, #M1177) was purchased from Sigma-Aldrich. Lipid dye II (#LD02) was from Dojindo Laboratories. Lysenin was a gift from Dr. Sekizawa (Zenyaku Kogyo). GFP-lysenin was a gift from Dr. Kobayashi (Riken). [14C(U)]L-serine (156 mCi/mmol, #MC265) was from Moravec.
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2

Establishing SARS-CoV-2 Infection Models

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BHK21 cells were maintained in MEM alpha medium (Cytiva; Hyclone, Marlborough, MA) containing 10% FBS (Cytiva; Hyclone, Marlborough, MA), 1× Penicillin Streptomycin (PS) solution (100 IU/mL Penicillin and 100 μg/mL Streptomycin, Corning, New York), and 1× HEPES buffer (Biological Industries, Israel). HEK293T/17 cells and Vero E6 cells were maintained in 10% FBS in DMEM/High glucose medium (Cytiva; Hyclone, Marlborough, MA) with 1× PS solution. Calu-3 cells were maintained in 10% FBS in MEM medium (ThermoFisher, Waltham, MA) with 1× PS solution. Human ACE2 (hACE2) overexpression in BHK21 cells was introduced by the lentiviral vector carrying the hACE2 gene as described previously (Su et al., 2020 (link)). SARS-CoV-2 virus (hCoV-19/Taiwan/4/2020) was kindly provided by the Taiwan Centers for Disease Control and was amplified in Vero E6 cells in M199 medium with 2 μg/mL TPCK-trypsin. All SARS-CoV-2 experiments were performed in a biosafety level 3 (BSL-3) laboratory. 2-Bromohexadecanoic acid (2BP) was purchased from Sigma-Aldrich (Darmstadt, Germany).
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3

Culturing Cells with Diverse Supplements

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Dulbecco’s Modified Eagle Medium (DMEM), Roswell Park Memorial Institute 1640 Medium (RPMI), penicillin, streptomycin, and L-glutamine were obtained from GibcoTM (Thermo Fisher Scientific, Waltham, MA, USA). Fetal calf serum (FCS), β-mercaptoethanol (2-ME), polybrene, Accutase® solution, brefeldin A (BFA), monensin (MN), 2-bromohexadecanoic acid (2-BP), lipopolysaccharide (LPS), phorbol 12-myristate 13-acetate (PMA), and dexamethasone (Dex) were purchased from Sigma-Aldrich (St. Louis, Missouri).
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4

Extracellular Vesicle Protein Analysis

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Hydroxylamine solution (HAM), N-ethylmaleimide (NEM), BrijO20, and 2-bromohexadecanoic acid (2BP), were purchased from Sigma-Aldrich (St. Louis, MO, USA). EZ-LinkTM BMCC-Biotin, Dynabeads protein G, Pierce streptavidin HRP conjugated and goat anti-rabbit Alexa Fluor 680 were purchased from Thermo Fisher Scientific (Rockford, IL, USA). Commercial antibodies included mouse anti-Alix for immunoblotting (clone 49/AIP1, BD Biosciences, San Jose, CA, USA) and anti-Alix for immunoprecipitations (clones 3A9 and 2H12, Santa Cruz Biotechnology, Santa Cruz, CA, USA); anti-CD63, clone H-193 and anti-CD9, clone KMC8.8 (Santa Cruz Biotechnology); anti-Hsp70/Hsc70 (Novus Biologicals, Littleton, CO, USA); anti-Bax (Sigma-Aldrich); anti-PARP (Cell Signaling Technology, Leiden, The Netherlands); anti-pan Actin, clone AC-40 (Sigma-Aldrich).
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