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Xbridge beh130

Manufactured by Waters Corporation

The XBridge BEH130 is a high-performance liquid chromatography (HPLC) column designed for analytical separations. It features a silica-based stationary phase with a particle size of 1.7 μm and a pore size of 130 Å, providing high-resolution separations of a wide range of analytes.

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3 protocols using xbridge beh130

1

High pH Reversed-Phase Fractionation

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For high pH reversed phase fractionation, dried samples were reconstituted in MS-grade water with 10% fractionation buffer A (25 mM ammonium bicarbonate, pH 8) and centrifuged for 5 min at 20,000x g and 4°C. The supernatant was then loaded on a C18 column (XBridge BEH130, 3.5µm, 2.1×150mm, Waters Corp), which was connected to a Dionex Ultimate 3000 HPLC system (Thermo Fisher). After injecting 200 µg protein digest of the sample at a flow rate of 200 µg/min, the system was equilibrated for 5 min with 85% fractionation buffer B (MS-grade water), 10% fractionation buffer A and 5% fractionation buffer C (ACN). Peptides were eluted in a three-step linear gradient from 5% to 9% buffer C in 2 min with a constant amount of 10% buffer A. Then, a linear gradient from 9% to 47% buffer C in 91 min and from 47% to 55% buffer C in 3 min (with buffer A being constant at 10%) was used.
Starting from minute 3, 96 fractions (1 fraction/min) were collected in a 96-well plate and pooled to 48 fractions. For that, column 7 was pooled to column 1, column 8 was pooled to column 2 and so forth. All fractions were frozen at −80°C and dried using a Speed-Vac.
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2

Synthetic Peptide Preparation and Purification

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All reagents and solvents were acquired from Sigma-Aldrich (Milano, Italy). Solution phase peptide synthesis was applied to prepare the final products KA1, K2–K6 as TFA salts, following the procedures reported below. Boc-protected intermediates were purified by silica gel column chromatography where necessary, or by trituration in Et2O. Final products KA1, K2–K6 were purified by RP–HPLC on a Waters XBridge BEH130 (C18 5.0 μm, 250 × 10 mm column; flow rate of 7 mL/min; Waters Binary pump 1525; eluent: linear gradient of H2O/ACN 0.1% TFA, ranging from 5% to 95% ACN in 32 min). The purity of the Nα-Boc-protected products was confirmed by NMR analysis on a Varian Mercury 300 MHz. The purity of all final compounds was assessed by NMR analysis, ESI–LRMS, and by analytical RP–HPLC (C18-bonded 4.6 × 150 mm; flow rate of 1 mL/min; eluent: gradient of H2O/ACN 0.1% TFA, ranging from 5% to 95% ACN in 26 min, recorded at 254, 275, and 213 nm and was found to be ≥95%). The mass spectrometry (MS) equipment was composed as follows: LCQ Thermo Finnigan ion trap mass spectrometer (San Jose, CA, USA) with an electrospray ionization (ESI) source; capillary temperature: 300 °C; spray voltage: 4.00 kV; nitrogen (N2) as the sheath and auxiliary gas.
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3

High pH Reversed Phase Fractionation

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For high pH reversed phase fractionation, dried samples were reconstituted in MS-grade water with 10% fractionation buffer A (25 mM ammonium bicarbonate (pH 8)) and centrifuged for 5 min at 20.000 × g and 4°C. The supernatant was then loaded on a C18 column (XBridge BEH130, 3.5 μm, 2.1×150 mm, Waters Corp), which was connected to a Dionex Ultimate 3000 HPLC system (Thermo). After injecting 100 μg peptides at a flow rate of 200 μg/min, the system was equilibrated for 5 min with 85% fractionation buffer B (MS-grade water), 10% fractionation buffer A and 5% fractionation buffer C (ACN). Peptides were eluted in a three-step linear gradient from 5% to 7% buffer C in 1 min with a constant amount of 10% buffer A. Then, a linear gradient from 7% to 42% buffer C in 44 min and from 42% to 80% buffer C in 6 min (with buffer A being constant at 10%) was used.
Starting from minute 3, 48 fractions (1 fraction/min) were collected in a 96-well plate and pooled to 24 fractions. For that, column 4 was pooled to column 1, column 5 was pooled to column 2 and column 6 was pooled to column 3. All fractions were frozen at −80°C and dried using a Speed-Vac.
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