Genotype and allele frequencies were estimated by direct counting and the Hardy-Weinberg equilibrium (HWE) probability value was achieved using an exact test. Differences in the genotype distribution between cases and controls were tested using logistic regression, under the additive (AA vs. AG vs. GG) and dominant (AA vs. AG/GG) models, to determine odds ratio (OR), 95% confidence intervals (CI) and p-values. These statistical analyses were performed using the PLINK software v.1.07 (
http://pngu.mgh.harvard.edu/purcell/plink/) (Purcell et al. 2007 (
link)).
The association of the rs4420638 polymorphism with obesity-related quantitative traits (e.g., weight, height, BMI, BMI Z-score and waist circumference), by comparing genotypes AA against AG + GG, were tested using the nonparametric Mann-Whitney test. These statistical analyses were performed using the IBM
SPSS Statistics software for Windows, version 27 (SPSS, Chicago, IL). A statistically significant association or difference was set at 5%.
Manco L., Albuquerque D., Rodrigues D., Machado-Rodrigues A.M, & Padez C. (2023). Protective Association of APOC1/rs4420638 with Risk of Obesity: A case-control Study in Portuguese Children. Biochemical Genetics, 62(1), 254-263.