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Si malat1

Manufactured by Sangon
Sourced in China

Si-MALAT1 is a laboratory product designed for scientific research purposes. It is a synthetic small interfering RNA (siRNA) targeting the MALAT1 gene. MALAT1 is a long non-coding RNA that plays a role in various cellular processes. The Si-MALAT1 product is intended for use in cell-based experiments to study the functional effects of MALAT1 knockdown.

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3 protocols using si malat1

1

Modulating MALAT1 Expression in Cell Lines

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Cell transfection was performed before cultured cells were grouped into four groups: pcDNA3.1 (empty vector pcDNA3.1), pcDNA3.1-MALAT1 (to induce MALAT1 overexpression), si-MALAT1 (to induce MALAT1 knockdown), and si-NC (control for MALAT1 knockdown).
The following sequence of si-RNA oligonucleotides (si-MALAT1) was used to knockdown MALAT1 expression: 5ʹ-CACAGGGAAAGCGAGUGGUUGGUA-3ʹ. The sequence of the noncoding control siRNA (si-NC) was 5ʹ-UUCUCCGAACGUGUCACGU-3ʹ. si-NC and si-MALAT1 were synthesized by Shanghai Sangon Biotechnology Co., Ltd. (Shanghai, China). pcDNA3.1 and pcDNA3.1-MALAT1 were purchased from Shanghai GenePharma Co., Ltd. (Shanghai, China).Cell transfection was performed by introducing 100 nM of miR-503-5p mimic, 100 nM of miR-503-5p inhibitor, mimics negative control (NC), inhibitor negative control, si-MALAT1, si-NC, pcDNA3.1, or pcDNA3.1-MALAT1 into cells for incubation at 37°C in a humidified chamber with 5% CO2 for correspondently 24, 48, and 72 hrs. Lipofectamine® 2000 transfection reagent (Invitrogen; Thermo Fischer Scientific, Inc.) was used according to the manufacturer’s protocol. After transfection for 48 hrs, RT-qPCR was performed to assess the transfection efficiency of MALAT1 knockdown and overexpression.
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2

Modulation of Pulmonary Alveolar Epithelial Cells

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Human pulmonary alveolar epithelial cells was bought through the American Type Culture Collection (ATCC) and maintained in Dulbecco’s modified eagle medium (DMEM) (Thermo Fisher Scientific, Inc.), 10% fetal bovine serum (FBS), and 1% penicillin-streptomycin. The cells were grown in a 5% CO2 incubator at 37°C. Transfection was conducted using a Lipofectamine®2000 system (Thermo Fisher Scientific, Inc.), as per established guidelines. The miR-194-5p inhibitor and small interfering RNAs (siRNAs) that targeted MALAT1 and FOXP2 were produced by Sangon Biotech Co., Ltd. Their sequences were as follows: si-MALAT1 (5′-CAAGCAGACAGC CCGTGCTGCTT-3′), si-negative control (si-NC; 5′-TTCTCCGAACGTGTCA CGTTT-3′), miR-194-5p inhibitor (5′-UCCACAUGGAGU UGCUGUUACA-3′), and negative control (NC) inhibitor (5′-TTCTCCGA ACGTGTCACGTTT-3′). FOXP2 was cloned into plasmid complementary DNA (pcDNA 3.1) (ov-FOXP2). The empty vector (ov-NC) served as negative control. 50 nM si-MALAT1, 50 nM si-NC, 50 nM miR-194-5p inhibitor, 50 nM NC inhibitor, 1 μg/μl ov-FOXP2, and 1 μg/μl ov-NC were added to HPAEpiC (2 × 105 cells/well) for 24 h prior to conducting the experiments. After 48 h, 1 μg/ml LPS (Sigma-Aldrich Chemical Co., Inc.) was supplemented for 24 h. The LPS dose was chosen based on the results of previous studies (Xu et al., 2014 (link)).
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3

miRNA regulation of MALAT1 expression

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The miR-negative control (miR-NC) and mimic of miR-124, and si-NC and si-MALAT1 were purchased from Sangon Biotech (Shanghai, China), and were directly transferred into cells using LipofectamineTM 2000 transfection reagent (11668019, Invitrogen, CA, USA). The wild type and mutated mRNA 3'-UTR of MALAT1 were first connected to pisCHECK2 (Promega, WI, USA) before being transfected into cells as miRNAs.
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