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9 protocols using macs magnetic separation column

1

CD206+ cell isolation and enrichment

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1x107 BAL cells were stained with anti-CD206 (Biolegend) and Human TruStain FcX block (Biolegend) for 15 minutes at 4°C in 0.5% FBS/2mM EDTA in PBS prior to incubation with MACS anti-Cy7 microbeads (Miltenyi Biotec) for 15 minutes at 4°C. Cells were enriched in MACS magnetic separation column (Miltenyi Biotec) and purity was confirmed on a representative subset (n = 29) by flow cytometry.
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2

Enrichment and Culture of KDR+ VPC

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KDR+ VPC induced from stage were first labeled with biotinylated anti-VEGF-2/KDR+ ((Miltenyi Biotech) followed by Streptavidin MicroBeads (Miltenyi Biotech), and processed through a MACS magnetic separation column (Miltenyi Biotech) according to the manufacturer recommendations. The KDR+ VPC were plated on dishes coated with either: 10 ng/ml fibronectin (BD Biosciences), 50ng/ml collagen-type IV (BD Biosciences), or 0.5% gelatin at either: 5,000, 10,000, or 20,000 cells/cm2. The stage 2 medium consisted of: 70% alpha-MEM and 30% DMEM, 2Χ Nutridoma CS, 1Χ ps, 1Χ NEAA, 2 mM L-glutamine, and 0.05 mM 2-mercaptoethanol. The supplemental amounts of bFGF examined included: 0 ng/ml, 10 ng/ml, 25 ng/ml, or 50 ng/ml; while amounts of VEGF examined were: 0 ng/ml, 10 ng/ml, 25 ng/ml, or 50 ng/ml. Half media changes were performed every 3 days. The cells were collected 2 weeks following the stage 1 induction, at days 28 and 26 of total differentiation for H7-ESC and H9-ESC, respectively.
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3

Immunofluorescence Imaging of Malaria Parasites

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Highly synchronous mature schizonts were isolated from uninfected erythrocytes using a MACS magnetic separation column (Miltenyi Biotec, Gladbach, Germay). Parasites were fixed and stained for IFA as previously described (44 (link)). Briefly, parasites were washed once in PBS and then fixed in 4% paraformaldehyde (Sigma-Aldrich, MO)–0.0075% glutaraldehyde (EMS, PA)–PBS for 30 min. Cells were washed in PBS and permeabilized in 0.1% Triton X-100–PBS for 10 min. Cells were washed again and blocked for 1 h with 3% bovine serum albumin (BSA)–PBS and then incubated with rabbit anti-GAP45 R728 (1:200) and rat anti-HA 3F10 (1:1,000) for 1 h. Cells were washed and then probed for 1 h with Alexa Fluor-conjugated secondary antibodies (Invitrogen) for 1 h. Cells were settled onto coverslips coated with 1% polyethylenimine (Sigma-Aldrich, MO). Cells were washed and mounted onto glass microscope slides with Vectashield (Vector Labs) plus 5 μg/ml DAPI (4′,6-diamidino-2-phenylindole). Parasites were imaged on a Zeiss LSM 880 laser scanning microscope.
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4

Purification and Invasion Assay of Malaria Merozoites

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Merozoites were purified as previously described (31 (link)). Briefly, highly synchronized ring-stage PfPKAc:loxP parasites were treated with DMSO or rapamycin and grown until they became late-stage schizonts. Mature schizonts were isolated from uninfected erythrocytes using a MACS magnetic separation column (Miltenyi Biotec, Gladbach, Germay). Schizonts were treated with E64 cysteine protease inhibitor (10 μM) for 4–6 h to prevent egress. Merozoites were purified from schizont preparations by passage through a 1.2-μm-pore-size syringe filter (Acrodisc) (32 mm, Pall). Filtrate containing purified merozoites was added to uninfected erythrocytes (final concentration, 1% hematocrit), and suspensions were agitated at 37°C for 20 min. Suspensions were then plated out in triplicate (100 μl per well, topped up with media to total 200 μl). After 24 to 40 h, levels of parasitemia were determined by flow cytometry as described above. The concentrations of merozoites and erythrocytes were quantitated using CountBright Absolute counting beads (Life Technologies), and the invasion rate was calculated as follows: percentage of erythrocytes invaded × [(number of erythrocytes per microliter)/(number of merozoites per microliter)] (31 (link)).
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5

Imaging of Synchronized Plasmodium Parasites

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Cultures (30 ml) of highly synchronous 3D7 WT or NF54 PKAloxP ring-stage parasites were prepared and treated with either DMSO (Sigma-Aldrich, MO) or rapamycin (LC Laboratories, MA). Once parasites had developed to become late schizonts, parasites were isolated from uninfected erythrocytes using a MACS magnetic separation column (Miltenyi Biotec, Gladbach, Germay). Cultures were centrifuged at 500 relative centrifugal force (RCF) for 5 min, and the parasite pellet was diluted 1:1,000 in fresh RPMI-HEPES. A 200-μl volume of RPMI-HEPES (0.25% hematocrit) was placed into microscope viewing chambers (Ibidi). A 50-μl volume of parasite suspension was applied to the fresh erythrocytes just prior to imaging. Parasites were imaged on an inverted Zeiss Live Cell AxioObserver microscope under bright-field conditions. The sample chamber was heated to 37°C and supplied with a humidified atmosphere that included 1% O2, 5% CO2, and 94% N2. Quantitation of live-imaging experiments was performed using Image J software.
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6

Isolation of Silver Nanoparticles from Magnetospirillum

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The isolation of silver nanoparticles from Magnetospirillum magnetotacticum culture was performed using MACS magnetic separation column (Miltenyl Biotec, Magdeburg, Germany). Briefly, M. magnetotacticum bacterial cells were suspended in 20 mM HEPES-4 mM EDTA (pH 7.4) and broken open by sonication for 5 min at 21 °C. The unbroken cells were removed by centrifugation at 9000 rpm for 30 min. The supernatant was harvested and passed through the MACS magnetic separation column, following the manufacturer’s protocol. Unbound magnetic particles were washed using 10 mM HEPES-200 mM NaCl (pH 7.4), and thereafter the silver nanoparticles were eluted with 10 mM HEPES (pH 7.4).
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7

Chemotaxis Assay for T Cell Migration

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Chemotaxis plates (101-216, 8µm pore size) were purchased from Neuro Probe, USA. 30µl of supernatant was placed in the bottom chamber. The porous insert was then placed on top.
Blood was obtained from 7 healthy volunteers. Mononuclear cells were isolated from blood by Lymphoprep density gradient centrifugation and resuspended in in RPMI containing 10% FCS. The suspension was then purified using a MACS magnetic separation column (Miltenyi Biotec) using microbeads for CD14 negative selection followed by CD4 positive selection. T cell purity (<90%) was confirmed by FACS CD4/CD3 selection. Isolated T cells were resuspended in RPMI and 5 x 10 4 cells in 20 µl were added to the top chamber. Cells were incubated in an atmosphere of 95 % humidity and 5% CO2 at 37°C for 2 hours. Following incubation, the suspension in the bottom chamber containing migrated cells was removed and placed in counting slides (BIO RAD, USA, 1450011). The cell count was performed using the BIO RAD TC20 automated cell counter. The percentage of cells that had migrated was calculated for each treatment. The percentage of cells that migrated for media only was set to 0 and other treatment values were expressed as a migration index.
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8

PBMC Isolation and Macrophage Generation

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Peripheral blood mononuclear cells (PBMC) were isolated using methods previously described (Yarilina et al, 2011 (link)). Briefly, 60 ml of blood was collected from independent healthy human donors into heparinized tubes. The human blood was diluted 1:1 with PBS, and leukocytes were isolated using UNI-SEP maxi tubes (NOVAmed) following manufacturer's instructions. Briefly, UNI-SEP maxi tubes were spun at 1,000 g for 20 min and the mononuclear cell layer was retrieved using a pipette. The isolated cells were then washed with RPMI 1640, and selection for CD14+ cells was performed using the MACS magnetic separation columns (Miltenyi Biotec) as per manufacturer's instructions. Subsequently, the CD14+ cells were seeded in 96-well tissue culture plates at 1 × 105 cells/well in 100 μl RPMI 160 supplemented with 10% FBS containing 100 IU/ml penicillin, 100 μg/ml streptomycin, and 20 ng/ml macrophage colony-stimulating factor (M-CSF)-1 (Life Technologies). The tissue culture media was replaced on day 5 and on day 7, and PBMC-derived macrophages were directly infected with GBS strains or primed with LPS (100 ng/ml) for 3 h before exposure to purified pigment (see below).
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9

Magnetosome Isolation from M. gryphiswaldense

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Magnetosomes were isolated from
microaerobically grown M. gryphiswaldense cultures as described previously.63 (link),86 (link) Briefly, the
cells were harvested by low-spin centrifugation, resuspended in 50
mM HEPES/NaOH + 1 mM EDTA, pH 7.2, and disrupted by using a microfluidizer
system. Particle isolation and purification were achieved by subjecting
the obtained crude extract to MACS magnetic separation columns (5
mL; Miltenyi, Bergisch Gladbach, Germany) placed between two neodymium–iron–boron
magnets. After several washing steps, the magnetic field was removed,
and the magnetosomes were eluted from the column. As an additional
purification step, the magnetosome suspension was afterward centrifuged
through a 60% (w/v) sucrose cushion at 200000g for
2 h at 4 °C. Finally, after resuspending the magnetosome pellet,
the suspension was stored in Hungate tubes at 4 °C under a nitrogen
atmosphere.
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