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5 protocols using dexamethasone (dex)

1

Inhibition of Immune Signaling Pathways

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LA-4 cells were pre-incubated with the indicated amounts of either the mTOR inhibitor rapamycin (Invivogen, Toulouse, France), MAPK-inhibitors U0126 (MEK1/2 MAPK inhibitor, Cell Signaling Technologies, Leiden, The Netherlands), SP600125 (SAP/JNK MAPK inhibitor, Invivogen), SB-202190 (p38α/β MAPK inhibitor, Invivogen), the NFκB- and MAPK-inhibitor dexamethasone (Invivogen), the IKK-β-inhibitor TPCA-1 (Abcam, Berlin, Germany), the inhibitor of actin polymerization cytochalasin A (Sigma-Aldrich), the inhibitor of endosomal acidification chloroquine (InvivoGen), or the COX2-inhibitor NS-398 (Sigma-Aldrich, Steinheim, Germany) for 90 min and subsequently stimulated with rFlaA:Betv1 for 24 h. For analyzing cell viability, LA-4 cells were treated as indicated and stained for dead cells using the fixable viability dye eFlour450 (#65-0865-14, eBioscience) and measured by FACS. Data were analyzed using FlowJo V.7 (Treestar Inc., Ashland, OR, USA) and GraphPad PRISM (GraphPad Software, San Diego, CA, USA).
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2

Endothelial Nitric Oxide Regulation

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All chemicals were purchased from Sigma-Aldrich (St Louis, MO) unless otherwise stated. Other reagents included FBS, Taqman RT-PCR primers, Taqman master mix, 4-Amino-5-methylamino-2′, 7′-difluorofluorescein Diacetate (DAF-FM DA), RNAimax and DAPI (Life Technologies, Carlsbad, CA); polyinosinic:polycytidylic acid (PIC) and NFκB inhibitors Bay117082, celastrol and dexamethasone (Invivogen, San Diego, CA); antibody against the S-nitroso (SNO) moiety (Sigma-Aldrich); antibody against 3-nitrotyrosine (NT) (Cayman Chemical, Ann Arbor, Michigan); PE- antibody against human CD31 and APC- antibody against mouse CD144 (BD Biosciences, San Jose, CA); antibody against inducible nitric oxide synthase (iNOS), HRP conjugated goat anti mouse or rabbit antibodies (Santa Cruz Biotechnology, Santa Cruz, CA); antibody against β-tubulin, Ring1A, H3K27 trimethylation (H3K27me3) and H3K9 dimethylation (H3K9me2; Abcam, Cambridge, UK); bone morphogenetic protein-4 (BMP-4), vascular endothelial growth factor (VEGF) and basic fibroblast growth factor (bFGF; Peprotech, Rocky Hill, NJ); Scramble and iNOS siRNA (Integrated DNA Technologies, Coralville, IA).
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3

Investigating Immune Responses to Dengue Virus

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PBMCs (1x106 cell/mL, 48-well plate) or HEKs (5X104 cells/mL, 96-well plate) cells were treated with 5 μg/mL or 15 μg/mL, respectively of anti-hTLR2-IgA (clone B4H2), pab-hTLR6-IgG (polyclonal), pab-hTLR1-IgG (polyclonal), anti-hCD14-IgA (2.5 μg/mL (PBMCs), clone D3B8), human IgA2 isotype control (clone T9C6), normal rat PAb IgG control blocking antibodies (InvivoGen), Dexamethasone (10μM, InvivoGen), Bay-11 (5μM, InvivoGen) or MG-132 (9.5μM, InvivoGen), C29 (100μM, MedChemExpress) for 2h followed by treatment with PAM3CSK4 (600 ng/mL (PBMCs), 50 ng/mL (HEK’s), InvivoGen), prM-DENV1 (MOG 250, MOG 300), prM-DENV2 (MOG 250, MOG 300, MOG 1000), prM-DENV4 (MOG 250, MOG 300, MOG 1000), UV-I prM-DENV2 (MOG 300) and std DENV2 (MOG 300) for 6h, 12h, 24h, 48h and 72h. For viral production analysis, supernatants from 48h and 72h later supernatants were collected and preserved at -80°C. For endothelial cells activation and cytokine production analysis, cell-free supernatants were collected at 6h, 12h, 24h, 48h and 72h post treatment and preserved at -80°C.
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4

Tolerogenic Dendritic Cell Generation

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Bone marrow was isolated from the femur and tibia from Balb/cAnNCrl (both male and female) 10–20 weeks old mice and seeded 450.000 fresh cells/ml in 6 wells plates (Corning costar). As culture medium IMDM (Gibco) supplemented with 10% FCS (Bodinco), 100 units/ml penicillin, 100 μg/ml streptomycin and 5 × 10−5 M β-mercaptoethanol in the presence of 20 ng/ml GM-CSF (in house produced) was used. On day 2 an equal volume of fresh culture medium containing 20 ng/mL GM-CSF was added, and on day 4/5 20 ng/mL fresh GM-CSF was supplemented to the culture. Tolerogenicity was induced by adding 10−6M dexamethasone (Invivogen) and 10−10M 1α,25-dihydroxyvitamin D3 (Enzo Life sciences) to the BMDC culture on day 7. Simultaneously with the tolerogenic agents, 10 μg/mL peptide (hPG: ATEGRVRVNSAYQDK) and maturation stimuli (lipopolysaccharide (LPS) 10 ng/mL; Sigma Aldrich or Monophosphoryl Lipid A (MPLA, 10 ng/mL) from Salmonella minnesota R595; Invivogen) were added. After 8 days of culture at 37°C, 5% CO2, the BMDCs or tolDCs were harvested for further experimentation. Before co-culture, BMDCs or tolDCs were replated into 24 wells plates (Corning costar). Before injection in co-transfer experiments, BMDCs or tolDCs were thoroughly washed with medium (2x) and PBS (1x) and kept on ice.
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5

Pharmacological Agents in Cellular Assays

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Pharmacological agents were used in the following concentrations and time courses: cycloheximide (Calbiochem, 0.2 µg/µl, 2, 4, or 8 h), dexamethasone (Invivogen, 10 µM, 24 h).
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