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Anti claudin 3

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom

Anti-claudin-3 is a laboratory reagent used in research applications. It is a monoclonal antibody that specifically binds to the claudin-3 protein, which is a component of tight junctions in epithelial and endothelial cells. The primary function of this product is to facilitate the detection and analysis of claudin-3 expression in biological samples.

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19 protocols using anti claudin 3

1

Immunofluorescence Imaging of Claudin-3

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Snap frozen tissue sections were fixed in 3% paraformaldehyde/2% sucrose in PBS, permeabilized with 0.5% Triton-X100, and saturated with goat serum in PBS. Samples were incubated with anti-claudin3 (Invitrogen) or with IgGH6 anti-claudin3 [13 (link)] over-night at 4°C followed by Alexa Fluor 594 anti-rabbit IgG (Molecular Probes, Eugene, OR). Cells membranes were stained with WGA lectin-Alexa Fluor 488 (Molecular Probes, Eugene, OR) and nuclei were counterstained with 4’,6-diamidino,2-phenylindole (DAPI, Sigma). Samples were analyzed using Zeiss Axiovert 200M epifluorescence microscope equipped with Apotome system, Plan-Neofluar 20x/0.5 NA and Plan-Apochromat 63x/1.4 NA oil objectives. Z-stack images were elaborated with AxioVision Inside4D module (Carl Zeiss) [24 (link)].
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2

Immunohistochemical Antibody Reagents

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The following commercial monoclonal or polyclonal antibodies were utilized at appropriate concentrations: Anti-human/mouse EpCAM C-terminus (ThermoFisher Scientific); anti-Ki67 (abcam, Cambridge, MA, USA); anti-lysozyme (Dako, Via Real Carpinteria, CA, USA); anti-claudin-1 (Invitrogen); anti-claudin-3 (Invitrogen); anti-claudin-7 (Invitrogen); anti-claudin-15 (Invitrogen); anti-HA tag (Sigma, St Louis, MO, USA); anti-mouse β-Actin (AC-15, Sigma); anti-mouse claudin-1 (2H10D10, ThermoFisher Scientific); anti-FLAG tag (M2, Sigma). Several rabbit monoclonal antibodies (anti-murine EpCAM (clone E73) and anti-TROP2 (clone E69)) were generated by Epitomics, Inc. (Burlingame, CA, USA). via a contract.
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3

Intestinal Tight Junction Protein Analysis

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For tissue lysate preparation, 2-cm distal intestine(ileum) was homogenized with a hand-held homogenizer in lysis buffer. For cell culture lysate preparation, cells on plates were rinsed with cold PBS and lysed in the same lysis buffer used for tissue lysate preparation. Total protein were extracted from the ileum tissue and Caco-2 cells respectively (keyGEN BioTECH, China). Protein concentrations were determined by Pierce BCA assay. Proteins were loaded on polyacrylamide gels and the proteins in the gels were transferred to PVDF membrane (Bio-Rad, USA). For immunodetection the following antibodies were used: anti-claudin-3, anti-occludin and anti -ZO-1(1:400, Invitrogen, USA), and then incubated with an HRP-conjugated anti-rabbit secondary antibody(1:2000, Cell Signaling Technology, USA) (room temperature, 1h). The protein bands were visualized with a G-BOX imaging system(Syngene, UK) using an ECL assay kit (Pierce, USA).
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4

Immunohistochemical Staining of Tissue Sections

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Paraffin embedded sections (~5-μm thick) were deparaffinized by heating to 60 °C for 15 min, cleared with xylene, followed by an ethanol gradient (75%, 95%, 100%) and water and steamed for 30 min in citrate buffer for antigen retrieval. Tissues were then treated with blocking buffer (goat or donkey serum in PBS containing 1% bovine serum albumin [BSA], 0.1% Triton X-100, 0.05% Tween 20, and 0.05% sodium azide). The primary antibodies used were anti-Ki-67 (Thermo Scientific, Waltham, MA, USA), anti-Lysozyme (Santa Cruz, Dallas, TX, USA), anti-Muc2 (Santa Cruz), anti-CA-1 (Santa Cruz), anti-5HT (Antibodies Incorporated, Davis, CA, USA), anti-Claudin-3 (Invitrogen, Carlsbad, CA, USA), anti-Claudin-4 (Invitrogen). The secondary antibodies used were Alexa Fluor 568- or 488-conjugated goat anti-rabbit IgG, and Alexa Fluor 568- or 488-conjugated donkey anti-rabbit or donkey anti-goat IgG (Life Technologies, Carlsbad, CA, USA). ProLong gold antifade reagent with 4′,6-diamidino-2-phenylindole (DAPI; Invitrogen, Carlsbad, CA, USA) to stain DNA was used to mount tissues. Tissues were viewed on a Zeiss Axio Imager microscope, and images were taken using AxioVision software and an AxioCam HRm camera.
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5

Immunoblot Analysis of Tight Junction Proteins

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Anti-ZO-1, anti-occludin, and anti-claudin-3 antibodies were purchased from Invitrogen (Carlsbad, CA). Anti E-Cadherin and anti β-catenin antibodies were purchased from BD Biosciences (Billerica, MA). Horseradish peroxidase (HRP)-conjugated anti-mouse IgG, HRP-conjugated anti-rabbit IgG and anti-β-actin antibodies were obtained from Sigma Aldrich (St. Louis, MO). AlexaFlour-488-conjugated anti-mouse IgG and Cy3-conjugated anti-rabbit IgG were purchased from Molecular Probes (Eugene, OR).
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6

Analyzing Colonic Epithelial Cell Proteins

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Cultured cells were rinsed twice with ice-cold HBSS, lysed in protein loading buffer (50 mM Tris, pH 6.8, 100 mM dithiothreitol, 2% SDS, 0.1% bromophenol blue, 10% glycerol), and then sonicated. Mouse colonic epithelial cells were collected by scraping the tissue from the colon of the mouse, including the proximal and distal regions.51 (link), 52 (link) The cells were sonicated in lysis buffer (10 mM Tris, pH 7.4, 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, pH 8.0, 1% Triton X-100) with 0.2 mM sodium ortho-vanadate, and protease inhibitor cocktail. The protein concentration was measured using the BioRad Reagent (BioRad, Hercules, CA, USA). Equal amounts of protein were separated by SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose, and immunoblotted with primary antibodies. The following antibodies were used: anti-claudin-2, anti-claudin-3, anti-claudin-7 (Invitrogen, Carlsbad, CA, USA), anti-p-STAT3, anti-STAT3, anti-p-IκBα, anti-IκBα, anti-p-SAPK/JNK, anti-SAPK/JNK (Cell Signal, Beverly, MA, USA), anti-Villin and anti-VDR (Santa Cruz Biotechnology Inc., Santa Cruz, CA, USA) or anti-β-actin (Sigma-Aldrich, Milwaukee, WI, USA) antibodies and were visualized by ECL. Membranes that were probed with more than one antibody were stripped before re-probing.
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7

Intestinal Transport Protein Expression

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Sodium butyrate, potato starch (PS; Sigma-Aldrich, St. Louis, MO). All primers for quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR) were synthesized by Integrated DNA Technologies (Coralville, IA). Antibodies were purchased from the following sources: anti–Na+/H+ exchanger isoform 3 (NHE3), anti–zona occludin-1 (ZO-1), anti–sodium-coupled monocarboxylate transporter 1 (SLC5A8), and anti–frizzled class receptor 7 (FZD7) from Abcam (Cambridge, MA); anti-occludin from Hycult Biotechnologies (Plymouth Meeting, PA); anti-claudin-3, Alexa Fluor 488, and 568 IgG from Invitrogen (Camarillo, CA).
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8

Immunoblot Analysis of Tight Junction Proteins

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Anti-ZO-1, anti-occludin, and anti-claudin-3 antibodies were purchased from Invitrogen (Carlsbad, CA). Anti E-Cadherin and anti β-catenin antibodies were purchased from BD Biosciences (Billerica, MA). Horseradish peroxidase (HRP)-conjugated anti-mouse IgG, HRP-conjugated anti-rabbit IgG and anti-β-actin antibodies were obtained from Sigma Aldrich (St. Louis, MO). AlexaFlour-488-conjugated anti-mouse IgG and Cy3-conjugated anti-rabbit IgG were purchased from Molecular Probes (Eugene, OR).
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9

Quantification of Tight Junction Proteins

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Anti-ZO-1 (rabbit polyclonal), anti-occludin (mouse monoclonal), anti-claudin-2 (mouse monoclonal) and anti-claudin-3 (rabbit polyclonal) antibodies were purchased from Invitrogen (Carlsbad, CA). Rabbit polyclonal anti-toll like receptor-4 (TLR4) antibody was from Santa Cruz Biotechnology, Inc. (Dallas, TX). Anti E-Cadherin (mouse monoclonal) and anti β-catenin (rabbit polyclonal) antibodies were purchased from BD Biosciences (Billerica, MA). Horseradish peroxidase (HRP)-conjugated anti-mouse IgG, HRP-conjugated anti-rabbit IgG and anti-β-actin (mouse monoclonal) antibodies were obtained from Sigma Aldrich. AlexaFlour-488-conjugated anti-mouse IgG and Cy3-conjugated anti-rabbit IgG were purchased from Molecular Probes (Eugene, OR).
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10

Immunoblotting of Epithelial Cell Proteins

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Mouse epithelial cells were lysed in lysis buffer (1% Triton X-100, 150 mM NaCl, 10 mM Tris, pH 7.4, 1 mM EDTA, 1 mM EGTA, pH 8.0, 0.2 mM sodium ortho-vanadate, and protease inhibitor cocktail) and the protein concentration was measured. SKC015 and MEF cells were rinsed three times in ice-cold HBSS, lysed in protein loading buffer (50 mM Tris, pH 6.8, 100 mM dithiothreitol, 2% SDS, 0.1% bromophenol blue, and 10% glycerol) and sonicated (Branson Sonifier, 250). Equal amounts of protein were separated by SDS-polyacrylamide gel electrophoresis, transferred to nitrocellulose (162–0112, Bio-rad, Hercules, CA, USA), and immunoblotted with primary antibodies. The following antibodies were used: anti-Claudin-2, anti-Claudin-3, anti-Claudin-7 (Invitrogen, Grand Island, NY, USA), anti-VDR, anti-Villin (Santa Cruz Biotechnology Inc., Dallas, Texas, USA), or anti-β-actin (Sigma-Aldrich, St. Louis, MO, USA) and were visualized by ECL (Thermo Scientific, Rockford, IL, USA). Membranes that were probed with more than one antibody were stripped before reprobing.
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