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10 protocols using pe anti human cd25

1

Comprehensive Immunophenotyping Protocol

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Anti-human CD4-PE (cat 300508) was from BioLegend. Anti-human CD83-FITC (cat 556910), anti-human HLA-ABC-PE (cat 555553), anti-human HLA-DR-PE (cat 555812), anti-human CD80-FITC (cat 557226), anti-human CD86-APC (cat 555660), anti-human CD25-PE (cat 555432), anti-human CD127-FITC (cat 561697), Anti-human CD4-PE-Cy7 (BD) (cat 348809), anti-TNF-PE-Cy7 (cat 557647), anti-human IL-2-PE (cat 559334), anti-human CD3-APC-H7 (cat 560176), anti-human CD4-CF594 (cat 5562281), anti-human CD4-PB (pacific blue), anti-human CD8-BV605 (cat 564116), anti-human CD8-PerCP-Cy5.5 (cat 341050), anti-human IFN-γ–AF700 (cat 557995), anti-human CD35-PE-Cy7 (cat 557741), anti-human IL-10 (cat 554707) were from Becton Dickinson, Pharmigen. Anti-human Foxp3-APC (cat 17-4776-41) was from eBioscience. Anti-human CD14-PE (cat A07764) was from Beckman Coulter. Anti-human CD45RO-APC/Cy7 (cat 304227), anti-human CD45RA-PE (cat 304205), anti-human CD3-APC (cat 300411), and anti-human CD40-APC (cat 313008) were from BioLegend). Anti-human IL-10-BV421(cat 501421), anti-human CD45RA-BV711 (cat 304137), anti-human CD127-BV711 (cat 351327) from Biolegend, anti-human CD45RO-ECD (cat IM2712) (BC), anti-human FoxP3-PE (cat 12-4777-42), from eBiosciences.
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2

Identification of Regulatory T Cells via Flow Cytometry

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The identification of Tregs (CD4+ and CD25hi T-cells) was determined by using fluorescently labeled antibodies specific to surface markers (CD4 and CD25). Briefly, 50 μl of heparinized blood collected from mother, cord and children were incubated in dark with 10 μl of anti-human CD4-FITC (BD-Bioscience), anti-human CD25-PE (BD-Bioscience) for 30 minutes at 4°C followed by addition of 2ml of lysing solution and incubation for 10 minutes at room temperature. The samples were then centrifuged at 250 X g for 10 mins and cell pellets were washed twice with 2 ml of sheath fluid (BD Bioscience). Finally the cell pellets were re-suspended in 0.5 ml of sheath fluid and subjected to flow cytometric analysis. Data were acquired by using BD FACS calibur flow cytometer and analyzed using cellquest pro software. The gating strategy for Tregs (CD4+CD25+ hi) cells is displayed in Fig 1.
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3

Cytokine-Mediated T-Cell Activation Protocol

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The culture medium used was X-VIVO media (Lonza, USA) supplemented with 10% human AB serum, 1% GlutaMAX (Invitrogen, USA), 1% sodium pyruvate (Invitrogen, USA), and 1% penicillin/streptomycin (Invitrogen, USA). Fluorochrome-conjugated anti-CD4 was from BioLegend (USA). Fluorochrome-conjugated anti-Ki67, CTLA4, and GITR were from eBioscience (USA). Fluorochrome-conjugated anti-CD45RA, TGF-β, IL-10, IFN-γ, IL-4, IL-5, IL-13, FOXP3, and GATA3 were from BD (USA). PE Annexin V Apoptosis Detection Kit I, Cytofix/Cytoperm Kit, Pharmingen™ Leukocyte Activation Cocktail with BD GolgiPlug™, and Leukocyte Activation Cocktail with BD GolgiPlug were also from BD (USA). Anti-Human CD25 PerCP-Cyanine5.5 was from eBioscience (USA), and anti-Human CD25-PE was from BD (USA). Human Neuropilin-1 PerCP MAb was from R&D (USA). Anti-Human USP21 was purchased from Sigma-Aldrich Co. (USA), and anti-Human PIM2 was from Santa Cruz (USA); the secondary antibodies were from Sigma-Aldrich Co. (USA). Recombinant human cytokine IL-2 was purchased from R&D, and rIL-4 and TGF-β were from PeproTech (USA). Ficoll-Paque PLUS was purchased from GE Healthcare (UK). Human IL-10 ELISA Kit and Human TGF-β1 ELISA Kit were from RayBiotech (USA). Anti-CD3/CD8 Dynabeads were purchased from Invitrogen (USA).
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4

Phenotyping of Activated Monocyte-Derived Dendritic Cells

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Phenotyping of resting and activated moDCs was performed by flow cytometry using anti-human CD1d-phycoerythrin (PE), CD103-FITC, HLA-DQ-FITC, PD-L1-PE (BD Biosciences, Franklin Lakes, NJ, USA), CD1a-allophycocyanin (APC), CD40-FITC (BioLegend, San Diego, CA, USA), CX3CR1-PE, CD80-FITC, CD83-FITC, CD86-PE, DC-SIGN-FITC, CCR7-PE, CD14-PE (R&D Systems, Minneapolis, MN, USA), B7RP1 (ICOSL)-PE (EBiosciences, Santa Clara, CA, USA), and isotype-matched control antibodies. The ratio of regulatory T-lymphocytes was measured by flow cytometry using anti-human CD25-PE (BD Pharmingen), CD4-FITC (BioLegend), FoxP3-APC (R&D Systems), and anti-IL-10-AlexaFluor488 (BioLegend). The viability of moDCs was determined with 2 μg/ml 7-amino-actinomycin D (LKT Laboratories Inc., St. Paul, MN, USA) dye followed by a 24-h activation period with live bacteria or LPS. Fluorescence intensities were measured by FACSCalibur (BD Biosciences), and data were analyzed by the FlowJo software (Tree Star, Ashland, OR, USA).
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5

Analyzing CD3+CD4+CD25+/high T-Cells

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The standard three-color flow cytometry was used to analyze CD3+CD4+CD25+/high T-cells with fresh PBMCs. Antibodies used were APC/Cy7 anti-human CD3 (BioLegend, San Diego, CA), FITC anti-human CD4, and PE anti-human CD25 (BD Biosciences). APC/Cy7-, FITC- or PE-conjugated IgG1κ, IgG2α were isotype controls.
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6

Quantifying Peripheral Blood T Cell Subsets

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Peripheral blood was diluted with PBS to the same volume, and PBMCs in diluted peripheral blood were isolated with lymphocyte separation fluid (lymphocyte separation fluid volume:diluted peripheral blood volume = 1:1). The finally about 0.5-1×106 cells per tube were used for flow cytometry analysis. PBMCs were labeled with APC-anti-human CD4, Perp-anti-human CD8, PE-anti-human CD25 and FITC-anti-human CD127 antibodies (all flow cytometry reagents came from BD Biosciences by following the manufacturer’s protocols). The percentages of CD4+, CD8+, CD4+ CD25+ and CD4+ CD25+CD127-/low cells were assessed by flow cytometry. The specificity of immunostaining was ascertained by the background fluorescence of cells incubated with CD25+ and CD127+ Ig isotype controls. FACSCaliber (BD Biosciences, Mississauga, Canada) was used to quantify the percentage of cells in all groups. CD8+Tregs had a low abundance (0.2- 2% of CD8+ T cells) in both the circulation and periphery in healthy controls. In comparison, the well-studied CD4+ Tregs comprise approximately 5-12% of the CD4+ T cell population. In our study, Tregs indicate CD4+ Treg cells.
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7

CD25+ T-cell Sorting Protocol

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After 15 h of co-culture, cells were stained with the following antibodies: PE anti-human CD25/ APC anti-human CD3/ V450 anti-human CD45 (BD Biosciences). FACS Aria Fusion Cell Sorter was used to sorter the different populations. The sorting strategy was: First, the viable region FSC/SSC, doublet zone FSC-A/FSC-H and positive region for CD45 was selected. Then, double positive cells (CD3+PKH+) and non-doublet cells (CD3+PKH-) were gated. Finally, within the non-doublet cells (CD3+PKH-), two different populations were sorted using the antibody CD25. The nozzle size used to sorter the doublet cells was 85 μm.
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8

Isolation and Culture of Naive CD4+ T Cells

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Peripheral blood mono-nuclear cells (PBMCs) were prepared by density gradient centrifugation according to standard Ficoll-Hypaque procedures (Pharmacia Biotech, Uppsala, Sweden). PBMCs were diluted with phosphate-buffered saline (PBS) and were stained with FITC anti-human CD4, PE-anti-human CD25, PerCP/Cy5.5 anti-human CD45RA (BD Biosciences, San Jose, CA, USA) or isotype-matched controls. The concentration of antibodies in each flow tube was ~20 µl/1–1.5×108 million cells, and the single-dyed and the non-dyed groups were set at the same time. The antibody concentration was ~1 µl/l×106 cells (dissolved in 50 µl PBS). After incubation on ice for 40 min, the cells were washed, resuspended in fluorescence-activated cell sorter (FACS) staining buffer (BD Biosciences). Naïve CD4+ T cells were gated on CD4, CD25 and CD45RA. After that, cells were centrifuged for 10 min, and resuspended in X-VIV015 medium (Lonza Co., Basel, Switzerland), and were cultured in an incubator (Thermo Fisher Scientific, Wilmington, DE, USA), with an atmosphere of 37°C and 5% CO2.
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9

Exosome-mediated T cell activation

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Aliquots (2 × 105) of PBMCs were placed in wells of 96-well-plates, and T cells in PBMCs were activated by human CD3/CD28 T cell activator (#10971, Stemcell Technologies) for 6 h at 37°C and then coincubated with MKN74-derived NC exosomes or PD-L1-KD exosomes for 48 h in the presence or absence of nivolumab (Bristol-Myers Squibb Company, Princeton, NJ, USA). PBMCs were stained with the following antibodies: FITC antihuman CD3 (561806, BD), APC antihuman CD69 (560967, BD), and PE antihuman CD25 (560989, BD). Isotype control Ab staining was used as a negative control.
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10

Activation Marker Analysis of Lymphocytes

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Cells were harvested 24 hours post reactivation and washed in cold PBS and 0.5 x 106 cells were allotted to each tube. Cells were stained with PE mouse anti-human CD69 (555531, BD Biosciences), PE anti-human CD25 (555432, BD Biosciences), FITC rat anti-mouse HSA (553261, BD Biosciences), or fixed immediately to analyze GFP expression. Cells were fixed in 2% paraformaldehyde and analyzed using the BD Biosciences FACScaliber and CellQuest Pro software at the UCSF Parnassus Flow Cytometry Core. Cells were gated on the live lymphocyte gate using the forward and side scatter plot, and the percentage of live lymphocytes in 10,000 collected total cells was used as an estimate for cell viability.
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