The largest database of trusted experimental protocols

238 protocols using silica gel 60 f254 plate

1

Isolation and Purification of Compounds from Ut1

Check if the same lab product or an alternative is used in the 5 most similar protocols
An aliquot of 4910 mg of the chloroformic extract of stem bark (Ut1) was subjected to column chromatography on silica gel 60 (Merck, 0.063-0.200mm) eluted with a gradient of increasing polarity of mixtures of chloroform and methanol. Based on their TLC profile (silica gel 60F254 plates, 0.25 mm layer thickness, Merk) with chloroform / ethyl acetate (80:20) as the mobile phase, similar fractions were combined to give 18 major subfractions (Ut1-1 to Ut1-18).
Fraction Ut1-1 (670.3 mg) was purified by mean of repetitive column chromatography on silica gel with a chloroform/ ethyl acetate gradient to yield Ut1-1-1 to Ut1-1-6. Subfraction Ut1-1-1 (117 mg) was subjected to preparative TLC on silica gel 60 F254 plates, 1 mm layer thickness (Merck) with chloroform / ethyl acetate (60:40) as mobile phase to give compound 1 (18 mg).
Fraction Ut1-3 (163.6 mg) was purified by repetitive column chromatography with a chloroform / ethyl acetate gradient to yield four subfractions Ut1-3-1 to Ut1-3-4. Subfraction Ut1-3-2 (110 mg) was subjected to preparative TLC with chloroform / acetone (9.5:0.5) as mobile phase to give compound 2 (8 mg).
+ Open protocol
+ Expand
2

Synthesis and Characterization of Heterocyclic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
All starting compounds and reagents used, except 2-oxindole which was obtained according to the known procedure,24 (link) are commercially available.
The progress of reactions was monitored by TLC on Silica gel 60 F254 plates (Merk) using n-hexane/ethyl acetate eluent. Purification of the products was carried out using an Isolera Four flash chromatograph on SNAP KP-Sil 100 g cartridges (Biotage) with n-hexane/ethyl acetate eluent. For separation of the mixture of C24 methyl ester and its dehalogenated product, an Omnifit glass column (DIBA) packed with LiChroprep RP-18 sorbent 25–40 μm (Merck) was used.
1H and 13C NMR spectra were recorded on a Bruker Avance III 400 (400 MHz) device in DMSO-d6. To determine the spatial configuration of the compounds (E or Z isomer), previously obtained crystallographic data or NOESY/ROESY spectra were considered. The isomer ratio was evaluated only by 1H-NMR, since the isomers have different absorption at 254 nm commonly used for detection in chromatographic devices. Mass spectra were recorded on a LCMS-2020 device (Shimadzu) with a single quadrupole detector under positive mode, electrospray ionization (ESI).
+ Open protocol
+ Expand
3

Polysaccharide and Oligosaccharide Hydrolysis by rAbf43A

Check if the same lab product or an alternative is used in the 5 most similar protocols
To explore the action mode of rAbf43A towards polysaccharides (including BWX, WAX, RAX and SBA) and oligosaccharides (including X2, X3, X4, X5, X6, A2XX, A2,3XX and XA3XX), hydrolysis experiments were performed. The purified rAbf43A (0.2 μg) was incubated with 1% polysaccharide or 0.2% oligosaccharide in 0.05 M citric‐Na2HPO4 buffer (pH 5.0) at 40°C for 24 h in a final volume of 10 μL. The reaction was terminated by boiling at 95°C for 10 min and centrifugated (8000 × g, 10 min). The degradation products were then analysed by HPLC and TLC. Arabinose, xylose and oligosaccharides (including X2, X3, X4, X5, X6, A2XX, A2,3XX and XA3XX) were used as standards for HPLC analysis as described above. For TLC analysis, 5 μL of the hydrolysates were spotted onto a silica gel 60 F254 plates (Merk, Germany). The plates were developed in a solvent system consisting of butanol: acetic acid: water at 5:4:1 (v/v/v). After spraying with a mixture of sulfuric acid: methanol at 1:4 (v/v), the plates were heated in an oven at 105°C for 10 min to detect sugar spots.
+ Open protocol
+ Expand
4

Nucleoside Phosphoramidite Synthesis and Purification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chemicals were obtained from Aldrich Chemical Company (St. Louis, MO, USA) and were used without further purification unless otherwise stated. Unmodified nucleoside phosphoramidites and 5′-dimethoxytrityl-2′-propargyluridine 3′-O-(N,N-diisopropyl-2-cyanoethyl) phosphoramidite were purchased from ChemGenes Corporation (Wilmington, MA, USA). [(3,3′-Iron-1,2,1′,2′-dicarbollide)(−1)]ate cesium salt was bought from Katchem (Režn/Prague, Czech Republic). Flash chromatography was performed on silica gel 60 (230–400 mesh, Aldrich Chemical Company). Rf values refer to analytical thin layer chromatography (TLC) performed using pre-coated silica gel 60 F254 plates purchased from Sigma-Aldrich (Steinheim, Germany) and developed in the solvent system indicated. Compounds were visualized with UV light (at λmax = 254 nm). The yields are not optimized.
+ Open protocol
+ Expand
5

Synthesis of Compounds 1-14

Check if the same lab product or an alternative is used in the 5 most similar protocols
The procedures described below were used for the synthesis of compounds 1–14. The rest of substrates as well as all solvents were purchased and used without further purification. Thin-layer chromatography (TLC) and preparative thin-layer chromatography (PTLC) were performed on silica gel 60 F254 plates purchased from Sigma Aldrich. Column chromatography was conducted using silica gel 60 (70230 mesh) produced by Sigma Aldrich. Melting points were measured using a Stuart Scientific SMP30 apparatus. 1H NMR, 13 C NMR and 31 P NMR data were obtained on a Varian Gemini spectrometer (400 MHz for 1H, 125 MHz for 13 C and 202 MHz for 31 P NMR). Chemical shifts (δ) are reported in ppm relative to the residual peak of chloroform as a solvent (1H 7.26 ppm and 13 C 77.16 ppm). A total proton decoupling was applied for 13 C NMR spectra. For 1H NMR description, the following symbols are used: s (singlet), bs (broad singlet), d (doublet), t (triplet), q (quartet), quint (quintet), sext (sextet), sept (septet), m (multiplet); and the coupling constant values (J) are determined in Hertz. MS spectra were measured on matrix-assisted laser desorption/ionization-time on flight mass spectrometry (MALDI-TOF MS, Biflex III Bruker).
+ Open protocol
+ Expand
6

Purification and Structural Analysis of Antibacterial Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
The fraction containing the active antibacterial compounds was purified and separated using silica gel 60 F254 plates (1.5 mm thickness; Sigma-Aldrich, MA, USA). A mobile phase composed of dichloromethane:ethyl acetate:hexane (5:20:75) was used for the chromatographic separation. Fractions exhibiting antibacterial activity were collected by scraping with a scraper and extracted with ethyl acetate. The resulting solution was filtered through 0.45 filter (Labfil, China). The purified samples were subjected to vacuum desiccation to eliminate residual moisture. The sample was subsequently dissolved in acetone and transferred to an NMR sample tube for further structural analysis using NMR spectroscopy.
+ Open protocol
+ Expand
7

NMR Spectroscopic Analysis of Organic Compounds

Check if the same lab product or an alternative is used in the 5 most similar protocols
NMR spectra were recorded using Avance DRX-400 and DPX-200 spectrometers (Bruker, Milan, Italy) operating at frequencies of 400 MHz (1H) and 100 MHz (13C) and 200 MHz (1H) and 50 MHz (13C), respectively The spectra were measured in CDCl3. The 1H- and 13C-NMR chemical shifts (δ) are expressed in ppm with reference to the solvent signals (CDCl3, δH 7.26 and δC 77.1). Coupling constants are given in Hz. NOESY (2D- NOE) experiments were executed on the Bruker Avance DRX-400 instrument. Preparative TLC was performed using pre-coated silica gel 60 F-254 plates (10 × 20 cm, Merck, Sigma-Aldrich, Milan, Italy) using n-hexane-acetone 8.5:1.5 as the eluent. Spots were visualized under UV light. Compounds were recovered from the stationary phase by washing five times with CH2Cl2 (DCM). Column chromatography was performed using MN Kiesegel 60 (70–230 mesh, Macherey-Nagel, Fisher Scientific, Milan, Italy). Fractions were monitored by TLC (Silica gel 60 F254; Merck), and spots on TLC were visualised under UV light and after staining with p-anisaldehyde-H2SO4-EtOH (1:1:98) followed by heating at 110 °C. All solvents used were of analytical grade and were purchased from VWR (VWR, Milan, Italy). Anhydrous Na2SO4 was purchased from Scharlau S.L. (Milan, Italy).
+ Open protocol
+ Expand
8

Hydroxytyrosol Enrichment from Olive By-Products

Check if the same lab product or an alternative is used in the 5 most similar protocols
Solvents, reagents, standards, silica gel 60 F254 plates, and silica gel 60 were purchased from Sigma-Aldrich (Milan, Italy). Hydroxytyrosol was prepared by the IBX oxidation of tyrosol as already reported [19 (link)]. A patented procedure based on membrane technology was applied to obtain hydroxytyrosol-enriched extracts from Olea europaea by-products [45 ]. The vegetal material was extracted with water and then subject to microfiltration (MF), nanofiltration (NF), and reverse osmosis (RO). Microfiltration was carried out with tubular ceramic membranes in titanium oxide; nanofiltration and reverse osmosis were carried out using spiral wound module membranes of poly(ether sulfone) [45 ]. The collected fraction was concentrated using a heat pump evaporator (Vacuum Evaporators—Scraper Series, C&G Depurazione Industriale Srl, Firenze, Italy) [3 (link),4 (link)]. High Performance Liquid Chromatographic (HPLC) analysis of the resulting extracts was carried out at λ = 280 nm using a diode array detector (DAD) to identify the polyphenolic compounds found in the sample. The quantitative data were referred to pure standards (tyrosol, hydroxytyrosol, oleuropein, and caffeic acid).
+ Open protocol
+ Expand
9

Quantification of Oxidative Stress in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
All chemicals (analytical grade), silica gel 60 F254 plates, and silica gel 60 were purchased from Sigma-Aldrich (Milan, Italy). 2′,7′-Dichlorodihydrofluorescein diacetate (DCFH2-DA) was supplied by Molecular Probes (Eugene, OR, USA). Fresh pure hydroxytyrosol was synthetized in our laboratory as previously reported [37 (link)]. L6 myoblasts from rat skeletal muscle and THP-1 human leukemic monocytes were purchased from the American Type Culture Collection (Rockville, MD, USA). DMEM (Dulbecco’s modified Eagle’s medium), RPMI 1640, streptomycin (100 mg/mL), penicillin (100 U/mL), d-glucose, and sterile plasticware for cell culture were from Falcon (San Diego, CA, USA). Fetal bovine serum was from GIBCO (Grand Island, NY, USA).
+ Open protocol
+ Expand
10

Thin Layer Chromatography Silica Gel

Check if the same lab product or an alternative is used in the 5 most similar protocols
Silica Gel 60-F254 plates (Sigma Aldrich) were used for TLC analyses.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!