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3 protocols using ab56400

1

Quantitative Western Blot Analysis of Apoptosis and Wnt Signaling

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Western blot of whole protein lysates or nuclear proteins from frozen tumor tissues or cells was performed as previously described (24 (link)). Antibodies for cleaved caspase 3 (Asp175) (5A1E), cleaved PARP (Asp214) (D64E10), cyclin D1 (92G2), β-catenin (6B3), active β-catenin (D13A1), TCF4 (C48H11), axin 1 (C95H11), tubulin (DM1A) and GAPDH (D16H11) were purchased from Cell Signaling Technology. Other antibodies included lamin B1 (ab16048, Abcam), COP1 (ab56400, Abcam), tankyrase1/2 (H-350, Santa Cruz), and active β-catenin (Clone 8E7, Millipore). ImageJ software was used to measure the relative density for signaling expression.
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2

Immunohistochemical Analysis of Signaling Proteins

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IHC was performed as previously described14 (link) using the following Ab: anti-STAT3 (124H6; Cell Signaling; catalog 9139); anti-p-STAT3 Tyr705 (D3A7; Cell Signaling; catalog 9145); anti-COP1 (ab56400, Abcam); anti-c-Jun (E254, ab32137); anti-EZH2 (D2C9, CST#5246); anti-Ki67 (Lab Vision Corp.; ready-to-use RT-9106-R7). The specificity of all antibodies was previously confirmed by Western blot analysis. Cell nuclei were counterstained with hematoxylin solution. Slides were evaluated by at least two investigators in a blinded manner.
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3

Comprehensive Immunophenotyping Assay

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The following primary antibodies were used: anti-tubulin (Abcam, ab210797), anti-KMT5A (Abcam, ab111691), anti-CD8 (Abcam, ab17147), anti-CD8 (Abcam, ab217344), anti-CD3 (Abcam, ab16669), anti-ubiquitin (CST, #43124), anti-CD69 (Abcam, ab54217), anti-FLAG (Abcam, ab205606), anti-HA (Abcam, ab236632), anti-6X His (Abcam, ab213204), anti-CD73 (Abcam, ab54217), anti-CD73 (Abcam, ab54217), anti-COP1 (Abcam, ab56400), anti-MKRN1 (Abcam, ab72054), anti-MDM2 (BOSTER, BA3612–2), and anti-Ki-67 (CST, #12202), anti-CD69 (BOSTER, A00529–2), anti-IFN-γ (Abcam, ab231036), anti-IL-2 (Abcam, ab92381), anti-TNF-α (Abcam, ab270264), anti-perforin (Abcam, ab47225), anti-Granzyme B (BOSTER, A00353), anti-perforin (Abcam, ab16074). The following secondary antibodies were used: goat anti-mouse (CST) and goat anti-rabbit (CST). MG132 and cycloheximide (CHX) were purchased from CST (USA). The CMV peptide pool stimulating CD8+ T cells was obtained from Mabtech (Sweden).
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