The largest database of trusted experimental protocols

24 protocols using nanoscope iiia controller

1

Atomic Force Microscopy Data Collection

Check if the same lab product or an alternative is used in the 5 most similar protocols
AFM data were collected
using a Bruker multimode 8 AFM system with a Veeco Nanoscope IIIa
controller in tapping mode. AFM image and height profiles were processed
and obtained in Gwyddion.
+ Open protocol
+ Expand
2

Characterizing Green-Synthesized Gold Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
UV-Vis spectroscopy (GenesysTM 150; Thermo Fisher Scientific, Waltham, MA, USA) was used to study the effects of incubation time on the green synthesis process. The peak absorbance wavelength was determined using the scanning mode (450–650 nm). Zeta (ζ) potential of the Au NPs (0.4 mM) was measured using a Zetasizer Nano ZS (Malvern, Westborough, PA, USA). Scanning electron microscopy (FE-SEM, Hitachi S-4800 ultra-high resolution cold cathode field emission scanning electron microscope, Kefeld, Germany) was used to image Au NPs (40 mM) that were dried and mounted to aluminum stubs. At the same time, energy dispersive X-ray spectroscopy (EDX, Noran (Si(Li))detector, Thermo Fisher Scientific, Waltham, MA, USA) was used to verify the elemental composition of the Au NPs. Atomic force microscopy (AFM) images, using 1.25 mM Au NP solution, were taken using contact mode on a Bruker MultiMode atomic force microscope (Billerica, MA, USA) with a Veeco Nanoscope IIIa controller (Santa Barbara, CA, USA). Au NPs (oven-dried at 45 °C) were also analyzed using attenuated total reflection Fourier transform infrared (ATR-FTIR; MIRacle 10, IR-Tracer 100; Shimadzu, Kyoto, Japan) spectroscopy. Lastly, powder X-ray diffraction analysis was performed using a Bruker D8 Discover X-ray diffractometer (Billerica, MA, USA) to confirm the crystalline structure of the Au NPs.
+ Open protocol
+ Expand
3

Polymer-Coated Ornidazole Microparticle Morphology

Check if the same lab product or an alternative is used in the 5 most similar protocols
The surface morphology of the polymer-coated Ornidazole microparticles was further analysed using conventional tapping mode of AFM (Nanoscope IIIa controller with Multimode AFM, Veeco, Cambridge, UK). The sample was prepared by adding drops of different dilutions on the clean glass cover slip. Samples were mounted on carbon sticky tabs and imaged in air using tapping mode tips. This study showed the distribution of Ornidazole within the polymer matrix.
+ Open protocol
+ Expand
4

Atomic Force Microscopy of Pseudoviruses

Check if the same lab product or an alternative is used in the 5 most similar protocols
A Multimode ™ AFM with a Nanoscope IIIa controller (Veeco, Santa Barbara, CA) operated in contact mode was used to image pseudoviruses before and after addition of vimentin or DNA. The cantilevers used were silicon nitride with a spring constant of 0.35 N/m (Veeco, Santa Barbara, CA). The AFM was calibrated using a 3D reference of 200 nm height and 10 µm pitch (Digital Instruments, Santa Barbara, CA). Deflection and height images were obtained with scan rates of 1 Hz with a resolution of 512 pixels/line. Briefly, for AFM evaluation of pseudoviruses in control (non-vimentin addition) and samples preincubated with human recombinant vimentin, a 10 µl drop of pseudoviruses or pseudoviruses/vimentin was applied on cleaved mica (SPI Supplies, West Chester, PA) and analyzed in a dried environment.
+ Open protocol
+ Expand
5

Microstructural Analysis of Pentapeptide Hydrogel

Check if the same lab product or an alternative is used in the 5 most similar protocols
The hydrogel microstructure was visualized with atomic form microscopy (AFM) using a Veeco Multimode AFM (Veeco Instruments, Inc., Santa Barbara, CA, USA) with a Nanoscope IIIa controller. A 10 μL drop of the pentapeptide hydrogel (2% w/v) was transferred by pipetting onto a mica surface. After 30 s, the mica was rinsed with 300 μL Milli-Q water and air-dried. The height images were acquired using cantilevers with a spring constant of 10 N/m while the scan rate was adjusted to 1 Hz.
For transmission electron microscopy (TEM) visualization of the peptide hydrogel (2% w/v), an aliquot of 10 μL was deposited on carbon film-coated grids and air-dried prior imaging with TEM Jeol 2100 operated at 200 kV. ImageJ software was used to determine the mean fiber diameter by randomly measuring 100 fibers from the TEM images.
+ Open protocol
+ Expand
6

Scanning Electron Microscopy and Atomic Force Microscopy Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Scanning electron micrographs (SEM) were taken using a JEOL JSM-5510LV scanning electron microscope. The samples were mounted with adhesive conducting tape over an aluminium holder and sputtered with gold for 3 minutes (Agar Sputter Coater). The vacuum within the sputter unit was ca. 1 × 10−3 torr.
AFM images were recorded using a MultiMode atomic force microscope (NanoScope IIIa controller; Veeco). The stage was equipped with a video microscope to position the sample on the J scanner base. The samples were fixed to glass coverslips using sticky tabs over stainless steel sample holders. Before AFM analysis, the samples were observed on the metallic discs using a binocular GX reflective optical microscope equipped with a Motticam 2000 microscope digital camera. All images were recorded in tapping mode using TESP 15 series (HQ:NSC15/Al BS) sharpened silicon probes with nominal spring constant of 40 N m−1 and nominal resonance frequency of 325 kHz (μmasch). The scan rate was changed according to the size of the scan area and the features observed on the surface. The scans were analysed using NanoScope software version 6.13 (Veeco). Each height image was processed using the plane-fitting third-order and the flatten zero-order commands in the software. For the amplitude images, the plane-fitting zero-order command was performed.
+ Open protocol
+ Expand
7

Multimodal Characterization of Materials

Check if the same lab product or an alternative is used in the 5 most similar protocols
Atomic force micrographs (AFM) were acquired using a Digital Instruments Dimension™ 3000 SPM with a NanoScope IIIa controller (Veeco instruments, Santa Barbara, California, USA) and a NanoScope IIIa software (version 4.42r4). Tapping mode was employed across the surface of the samples at a frequency of 1 Hz.
The infrared (IR) spectra were recorded in the mid-infrared region (4000–550 cm−1) on a Bruker ALPHA in diamond attenuated total reflection (ATR) using Opus software. The resolution was 2 cm−1 at 128 scans.
Raman spectroscopy was performed on an iHR 320 model fully automated spectrometer with a wavelength position resolution of 0.2 cm−1. The excitation source was an argon ion laser (514 nm) within the wavenumber range of 0–4000 cm−1.
+ Open protocol
+ Expand
8

Sample Preparation for AFM Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
The entire volume of each sample was placed on freshly cleaved mica (1 × 1 cm). After 5 min, the solvent was absorbed with filter paper. MilliQ water (20 µL) was then placed on the mica surface and immediately absorbed with filter paper. This process was repeated three times to remove salts from the sample. All samples were dried in vacuo prior to AFM measurements. Tapping-mode images were obtained on a multimode scanning probe microscope with a Nanoscope IIIa controller (Veeco, Woodbury, NY, USA).
+ Open protocol
+ Expand
9

Atomic Force Microscopy of Surface Topography

Check if the same lab product or an alternative is used in the 5 most similar protocols
Atomic Force Microscopy was done using a Nanoscope IIIa controller (Veeco Instruments, Santa Barbara, CA, USA), silicon-nitride tip (NP-20, Veeco, k = 0.32 N/m) in the contact mode. The size of the scanned area was 10 × 10 μm (512 × 512 pixels). The AFM image analysis was done using Gwyddion 2.60 software (P. Klapetek, Czech Metrology Institute, Brno, Czech Republic and D. Nečas, University of Technology, Brno, Czech Republic) [18 (link)]. Before quantitative analysis, AFM images were corrected for polynomial background (second-order) to avoid the possible influence of the surface curvature. Also, the data were levelled by subtraction of the mean plane.
+ Open protocol
+ Expand
10

Atomic Force Microscopy of BSA Chaperones

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples BSA:chaperones A, B, C, D, E, F, and G (1:1) and BSA from kinetic assays at 65°C were diluted with milli-Q water in a 1:9 (v/v). 100 μL of the diluted sample were deposited on a mica and dried under vacuum over moisture-free silica gel. After drying micas, 500 μL of milli-Q water was added and allowed to stand for 5 min before removing the excess of water using filter paper. The micas were dried again for 24 hours and deposited over glass slides used in light microscopy. The samples were observed with an atomic force microscope (Bioscope, Digital Instruments, Santa Barbara CA, USA, equipped with a Nanoscope IIIa controller) working in contact mode with a silicon nitride probe (DNP, Veeco, USA). Microscope works on an inverted Diaphot 200 (Nikon) microscope with a 100 microns scanner and silicon nitride tips with 50 nm radius of curvature (DNP–Veeco). Sweep speeds used between 1969–1285 Hz, 10 nN force and 0.5 arbitrary units of gain.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!