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7 protocols using p70s6k

1

Western Blot Analysis of AKT, mTOR and p70S6K

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Whole cells were lysed by lysis buffer (RIPA buffer contains protease inhibitors and phosphatase inhibitors). Protein concentration was measured using the Pierce BCA Protein Assay Kit (Thermo Scientific, Shanghai, China). A total of 30 μg of protein was separated on SDS-PAGE gels (mTOR/P-mTOR 6% gel, pAKT473/AKT/β-Actin 12% gel, pp70s6k/p70s6k 10% gel) and transferred onto Immobilon-P membrane (IPVH07850; Millipore, Darmstadt, Germany). Membranes were first blocked with 5% non-fat milk in Tris-buffered saline with 1% Tween 20 (TBST) at room temperature for 1 h, then incubated overnight at 4 °C with the following primary antibodies: pAKT473 (Cell Signaling Technology, Boston, MA, USA), pAKT308 (Cell Signaling Technology, Boston, MA, USA), AKT (Cell Signaling Technology, Boston, MA, USA), pmTOR (Cell Signaling Technology, Boston, MA, USA), mTOR (Cell Signaling Technology, Boston, MA, USA), pp70s6k (Cell Signaling Technology, Boston, MA, USA), and p70s6k (Cell Signaling Technology, Boston, MA, USA), diluted at a 1:1000 ratio in TBST with 3% bovine serum albumin (BSA), washed with TBST, and finally incubated with HRP-labelled goat anti-mouse or anti-rabbit IgG secondary antibodies at room temperature for 1.5 h. The proteins were visualized by Plus-enhanced chemiluminescence using Universal Hood III (Bio-Rad, Hercules, CA, USA).
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2

Antibody-Based Signaling Pathway Analysis

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Antibodies were obtained from Cell Signaling, Boston, MA, USA (Smad2 #5339, pERK1/2T202/Y204, ERK1/2, pFoxO3aT32, p-mTORS2448, mTOR, rictor, raptor, GβL, p4E-BP1S65, 4E-BP1, pAktS473, Akt, ATG7, LC3b, SGK, pULK1S757), Novus Biologicals, Littleton, CO, USA (eIf3f Lamp2), Epitomics, Burlingame, CA, USA (pSmad3S423/S425, Smad3), Invitrogen, Grand Island, NY, USA (pSmad2S465/S467), Abcam, Cambridge, MA, USA (p70S6k, p-p70S6kT389, Myogenin, FoxO3a, p62, ULK1), Millipore, Billerica, MA, USA (pFoxO3aS252, p21), ECM Biosciences, Versailles, KY, USA (atrogin-1), and Santa Cruz Biotechnology, Dallas, TX, USA (GAPDH). Secondary antibodies were obtained from GE Healthcare, Pittsburgh, PA, USA (anti-rabbit, anti-mouse, anti-rat) and Sigma-Aldrich, St Louis, MO, USA (anti-goat).
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3

Autophagy Regulation by Akt/mTOR Pathway

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P-PDK1(Ser241), Akt, p-Akt(Ser473), 4EBP1 and p-4EBP1(Ser65) and α-tubulin were purchased fromCell Signaling Technology (Danvers, MA, USA). P70S6K and p-P70S6K(Thr470) were acquired from Millipore (Boston, MA, USA). Antibodies against LC3, SQSTM1, Atg5, Beclin1, LAMP1, Bcl-2, Bax, cytochrome C, active caspase-9, active caspase-3, cleaved PARP, mTOR, p-mTOR(S2448) and β-actin were obtained from Abcam (Cambridge, UK). YZT was dissolved in DMSO and diluted with culture medium. CQ, 3-methyladenine (3-MA) and rapamycin (RAPA) were bought from Sigma-Aldrich (Saint Louis, MO, USA).
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4

Western Blot Analysis of Apoptosis and Autophagy

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For western blots, 2 × 105 OVCAR-3 or A2780 cells per well were plated in a 6-well plate for 24 h. Subsequently, the cells were incubated with the appropriate drug for distinct time periods and the western blots were performed as previously described [36 (link)] using the following antibodies: Capsese-3 (Cell Signaling Technology, USA, #9661), PARP (Cell Signaling Technology, USA, #9542), Microtubule-associated protein 1 light chain 3 (LC3) (Sigma, USA, #L7543), p62/SQSTM1/SQSTM1 (Cell Signaling Technology, USA, #5114), ATG5 (Cell Signaling Technology, USA, #9980), ATG7 (Cell Signaling Technology, USA, #8558), p-AKT (Cell Signaling Technology, USA, #9271), AKT (Cell Signaling Technology, USA, #9272), BAX (Proteintech Group, USA, #23931-1-AP), Bcl-2 (Proteintech Group, USA, #12789-1-AP), and Mcl-1 (Proteintech Group, USA, #16225-1-AP), p-p70S6K (Thr389) (Sigma, USA, #MABS82), p70S6K (Sigma, USA, #06-926), p-mTOR (S2448) (Abcam, USA, #ab109268), -S6 Ribosomal (Cell Signaling Technology, USA, #5364), S6 Ribosomal (Cell Signaling Technology, USA, #2317), mTOR (Abcam, USA, #ab2732), and β-actin (Origene, USA, #TA811000), peroxidase-linked anti-rabbit antibody (Cell Signaling Technology, Danvers, USA, #7074) or peroxidase-linked anti-mouse antibody (Sigma-Aldrich, St. Louis, USA, #A9044).
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5

Western Blot Analysis of Signaling Proteins

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After PTEN-P2 and PTEN-CaP2 reached approximately 80% confluence, they were treated with empty micelle control, docetaxel or rapamycin or 17-AAG loaded micelle, or DR17 for 24 hours. Cells were harvested for protein extraction using RIPA lysis buffer. Extracted proteins were quantified using BCA protein assay (Thermo Fisher Scientific Inc.) and were used for Western Blot following protocol as described in previous study [6 (link)]. Primary antibodies for Western blot detection were from Cell signaling Technology Inc. unless stated otherwise: p70S6K (1:1000), phospho-p70S6K (1:500), AKT (1:1000), phospho-AKT S473 (1:500), phospho-AKT T308 (1:500), HSP90 (1:1000), HSP70 (1:500), beta-actin (Sigma, 1:4000). Secondary antibodies (both from Santa Cruz Biotechnology) used for detection was either anti-rabbit IgG-HRP (1:10,000) or anti-mouse IgG-HRP (1:10,000). Blots were developed using enhanced chemiluminescence (ECL) detection system (Thermo Fisher Scientific Inc.).
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6

Investigating Cellular Pathways Modulation

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Rotenone, sulforaphane, dimethyl sulfoxide (DMSO), 2′,7′-dichlorodihydrofluorescein diacetate (DCFH-DA) and 2′,7′-dichlorofluorescein (DCF) were purchased from Sigma (St. Louis, MO, USA); CMC: (Nacalai Tesque, Kyoto, Japan); Protease and phosphatase inhibitor mini tables (Thermo Scientific, USA); RIPA lysis buffer was purchased from Beyotime, China. The following antibodies were used: phospho-S6K (Thr389), 4E-BP1, Cleaved-caspase-3, LC3A/B (Cell Signalling Technology, Beverly, MA, USA); phospho-mTOR (Ser2448), mTOR (all from sigma); p70S6K; Nrf2, heme oxygenase-1 (HO-1); NAD(P)H dehydrogenase, quinone 1/(NQO1) and monoclonal mouse anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Santa Cruz Biotechnology, Santa Cruz, CA, USA). Tyrosine hydroxylase (TH) (Millipore, Billerica, MA). Dulbecco’s Modified Eagle’s Medium (GIBCO, Gaithersburg, MD, USA). Other chemicals were provided by local commercial sources and were of analytical grade quality.
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7

Immunoblotting Analysis of Cardiac Proteins

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Crude cardiac or NRCM extracts were prepared, followed by immunoblotting, as described.26 Antibodies used were as follows: LAMP2 (Lysosomal Associated Membrane Protein 2), mouse monoclonal (Developmental Studies Hybridoma Bank, ABL‐93); LAMP1 (Santa Cruz Biotechnology, sc‐19992); anti‐LC3 (encoding for MAP1LC3B (Microtubule Associated Protein 1 Light Chain 3 Beta) subunit; Novus Biologicals, NB100–2220); SQSTM1 (Sequestosome 1) (Abcam, ab5416); TFEB (Bethyl Labs, A303–673A); HA (H6908; Sigma), p70S6K (phosphorylated Ribosomal protein S6 kinase beta‐1) (2708; Cell Signaling); phosphorylated p70S6K (9234; Cell Signaling); 4‐EBP1 (Eukaryotic translation initiation factor 4E‐binding protein 1) (9644; Cell Signaling); phosphorylated 4EBP1 (2855; Cell Signaling); phosphorylated mTOR (2974; Cell Signaling); mTOR (2983; Cell Signaling); histone H3 (9715, Cell Signaling); GAPDH (ab22555; Abcam); Hspb8 (3059S, Cell signaling); and ACTA1/α‐sarcomeric actin (Abcam, ab7799) or actin (Sigma, A2066). Protein abundance was normalized to actin or GAPDH protein expression and reported as fold change versus control.
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