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E cadherin sirna

Manufactured by Santa Cruz Biotechnology
Sourced in United States

E-cadherin siRNA is a laboratory tool used to temporarily suppress the expression of the E-cadherin gene in cell culture experiments. It is a synthetic double-stranded RNA molecule designed to induce RNA interference (RNAi) and downregulate the target gene.

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7 protocols using e cadherin sirna

1

E-cadherin Knockdown in MDA-MB-231 Cells

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SNX27-KD and WT MDA-MB-231 cells were plated in 12-well plates for 24 h before transfection. Cells were transfected with 25 nM E-cadherin siRNA (Santa Cruz Biotechnology), and control siRNA (Santa Cruz Biotechnology) using Lipofectamine-3000 transfection reagent (Invitrogen) according to the manufacturer’s instruction. The cells were harvested at 72 h post-transfection, and assayed by western blot.
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2

Molecular Mechanism of 3-DZNeP and Cisplatin

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3-DZNeP was purchased from Selleckchem (Houston, TX, USA). Cisplatin was purchased from Sigma (St. Louis, MO, USA). Antibodies to caspase3, E-cadherin, EZH2, H3K27me3, p-JNK, p-ERK1/2, p-p38, histone H3, and tubulin were purchased from Cell Signaling Technology (Danvers, MA, USA). Antibody to NGAL was purchased from R&D systems (Minneapolis, MN, USA). Antibodies to GAPDH, β-actin, horseradish peroxidase-conjugated secondary antibodies, enhanced chemiluminescence (ECL) detection kit, cell counting kit-8 (CCK-8), and DAPI were from Beyotime institute of Biotechnology (Jiangsu, China). Scr and BUN reagent kits were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). EZH2 siRNA, E-cadherin siRNA and scramble siRNA were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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3

Quantitative Analysis of Cellular Signaling Pathways

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Purified non-labeled mouse/rabbit mono-/polyclonal antibodies were anti-CTNNAL1, Mcl-1, CBP, p38 and p-p38 (Abcam, Cambridge, MA, USA), ERK, p-ERK, JNK, p-JNK, c-Jun, p-cJun, p21waf/cip1, p53, GAPDH, (Cell Signaling Technology, Inc., Danvers, MA, USA), KI-67 (Santa Cruz, Texas, USA). HRP-conjugated secondary anti-mouse and anti-rabbit antibodies were obtained from Life Technologies and Cell Signaling Technology, Inc., respectively. Anti-α-tubulin-HRP conjugated antibody was purchased from Cell Signaling Technology, Inc.
Texas-Red conjugated secondary anti-mouse and anti-rabbit antibodies were purchased by Jackson Immuno (Newmarket, UK). HGF and TNF-α were purchased from PeproTech Inc. (Rocky Hill, NJ). LPS was purchased from Sigma-Aldrich (St. Louis, MO, USA).
5x NFκB-luc-Reporter and AP-1-luc-Reporter plasmids were obtained from Agilent technologies (Santa Clara, USA), pGL3 reporter and control vectors were purchased from Invitrogen, E-cadherin si-RNA was purchased from Santa Cruz Biotechnology, Inc. and Caspase3/7, 8 and 9 assay and CellTiter-Blue cell viability Assay from Promega (Madison, USA). Staurosporine was purchased from eBioscience (CA, USA). Chemotherapeutic agents dacarbazine, cisplatin and paclitaxel were acquired from Sigma-Aldrich.
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4

Inhibiting Autophagy and Cell Signaling

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Treatment with inhibitors was performed as follows: we used the autophagy inhibitor chloroquine (10 μM), the mTOR inhibitors Temsirolimus (10 μM) and Rapamycin (100 nM) and the GSK-3 inhibitor LiCl (20 mM). Where indicated, cells were preincubated with the inhibitors for 20 min at 37 °C and inhibitors were maintained in the medium during lectin incubation. All inhibitors were purchased from Sigma-Aldrich (Munich, Germany). Preblocking of LecB with 0.3 M L-fucose (Sigma-Aldrich) was performed for 30 min at room temperature, and afterwards the preblocked LecB was added to the cells. E-Cadherin siRNA and scrambled siRNA were purchased from Santa Cruz Biotechnology (Heidelberg, Germany). Antibodies used in this study were purchased from Cell Signaling Technology (Leiden, The Netherlands) and Santa Cruz Biotechnology.
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5

Knockdown of c-Met and E-cadherin in OKF6/TERT2 cells

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As previously described [51 (link)], OKF6/TERT2 cells were grown in 6 well plates to 80% confluency and transfected with 40 pmole of c-Met siRNA (#SC-29397, Santa Cruz Biotechnology) or E-cadherin siRNA (#SC-35242, Santa Cruz Biotechnology) using Lipofectamine 2000 (#11668027, ThermoFisher Scientific) following the manufacturer’s instructions. After 24 h, the cells were trypsinized, seeded onto fibronectin coated glass coverslips, and incubated for another 24 h before use. The extent of protein knockdown was determined by immunoblotting with an anti-c-Met antibody (#8198, Cell Signaling Technology), anti-E-cadherin antibody (#3195, Cell Signaling Technology), anti-EGFR antibody (#4267, Cell Signaling technology), and anti-β-actin antibody (#A5441, Sigma-Aldrich).
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6

Knockdown of c-Met and E-cadherin in OKF6/TERT2 Cells

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As previously described (Phan et al., 2021 (link)), OKF6/TERT2 cells were grown in 6 well plates to 80% confluency and transfected with 40 pmole of c-Met siRNA (#SC-29397, Santa Cruz Biotechnology) or E-cadherin siRNA (#SC-35242, Santa Cruz Biotechnology) using Lipofectamine 2000 (#11668027, ThermoFisher Scientific) following the manufacturer’s instructions. After 24 h, the cells were trypsinized, seeded onto fibronectin coated glass coverslips, and incubated for another 24 h before use. The extent of protein knockdown was determined by immunoblotting with an anti-c-Met antibody (#8198, Cell Signaling Technology), anti-E-cadherin antibody (#3195, Cell Signaling Technology), anti-EGFR antibody (#4267, Cell Signaling technology), and anti-β-actin antibody (#A5441, Sigma-Aldrich).
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7

Knockdown of β-Catenin and E-Cadherin

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Cell lines were plated in six-well plates with fresh media without antibiotics for 24 h before transfection. Cells were transfected with β-catenin siRNA (sc-29209, Santa Cruz Biotechnology, Santa Cruz, CA, USA), E-cadherin siRNA (sc-35242, Santa Cruz) and control siRNA (sc-37007, Santa Cruz Biotechnology), using Lipofectamine-2000 (Invitrogen) according to the manufacturer's instruction. All the siRNAs were composed of a pool of two target-specific 19–25 nt siRNAs, The cells were harvested at 48 hours post-transfection.
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