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3 protocols using anti cd44 clone im7

1

Lung Cell Suspension Preparation

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Lung cell suspensions were prepared as described before31 (link). Briefly, after perfusion with heparin in PBS, lungs were minced, digested with DNAse/collagenase, lysed for red blood cells, and pressed through a 0.7 μm filter to generate a single cell suspension. Cells were stained with appropriate fluorochrome-labeled specific antibodies or isotype control antibodies. Intracellular cytokine staining was performed using the BD Cytofix/Cytoperm kit (BD Biosciences). Mouse antibodies used include anti-CD11b (clone M1/70; Tonbo Biosciences), anti-CD11c (clone HL3; BD Biosciences), anti-Gr-1 (clone RB6–8C5, eBioscience), anti-CD3 (clone 500A2; BD Biosciences), anti-CD4 (clone RM4–5; BD Biosciences), anti-CD44 (clone IM7; eBioscience), and anti-IFN-γ (XMG1.2; BD Biosciences). Cells were processed with the Becton Dickinson (BD) Fortessa flow cytometer using FACS Diva software, or the BD FACSJazz flow cytometer using FACS Sortware software (BD). Flow cytometry experiments were analyzed using FlowJo (Tree Star Inc). As before34 (link), neutrophils were defined as CD11b+CD11c-Gr-1hi cells, monocytes were defined as CD11b+CD11c-Gr-1med cells, and recruited macrophages were defined as CD11b+CD11c-Gr-1low cells. Total numbers of cells within each gate were back calculated based on cell counts/individual lung sample.
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2

Lung Cell Suspension Preparation

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Lung cell suspensions were prepared as described before31 (link). Briefly, after perfusion with heparin in PBS, lungs were minced, digested with DNAse/collagenase, lysed for red blood cells, and pressed through a 0.7 μm filter to generate a single cell suspension. Cells were stained with appropriate fluorochrome-labeled specific antibodies or isotype control antibodies. Intracellular cytokine staining was performed using the BD Cytofix/Cytoperm kit (BD Biosciences). Mouse antibodies used include anti-CD11b (clone M1/70; Tonbo Biosciences), anti-CD11c (clone HL3; BD Biosciences), anti-Gr-1 (clone RB6–8C5, eBioscience), anti-CD3 (clone 500A2; BD Biosciences), anti-CD4 (clone RM4–5; BD Biosciences), anti-CD44 (clone IM7; eBioscience), and anti-IFN-γ (XMG1.2; BD Biosciences). Cells were processed with the Becton Dickinson (BD) Fortessa flow cytometer using FACS Diva software, or the BD FACSJazz flow cytometer using FACS Sortware software (BD). Flow cytometry experiments were analyzed using FlowJo (Tree Star Inc). As before34 (link), neutrophils were defined as CD11b+CD11c-Gr-1hi cells, monocytes were defined as CD11b+CD11c-Gr-1med cells, and recruited macrophages were defined as CD11b+CD11c-Gr-1low cells. Total numbers of cells within each gate were back calculated based on cell counts/individual lung sample.
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3

Multiparametric Immune Profiling of BALF

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BALF cells were stained at 4°C in PBS containing 1% FBS after FcγRII/III blockade with anti-mouse CD16/CD32 (clone 93; eBioscience). Surface staining was performed with antibodies purchased from eBioscience (anti-CD45, clone 30-F11; anti-CD11b, clone M1/70; anti-CD11c, clone N418; anti-Ly6G (Gr-1), clone RB6-8C5; anti-CD3, clone 145-2C11; anti-CD4, clone RM4-5; and anti-CD44, clone IM7). For Treg staining, cells were surface-stained with anti-CD4 and anti-CD25 (clone PC61.5) and followed by permeabilization with the Foxp3/Transcription Factor Buffer Staining Set (eBiosciences). Then the cells were stained with anti-foxp3 (clone FJK16s) antibody. For intracellular staining, cells were surface-stained with anti-CD4 and anti-CD44, followed by permeabilization with the Fixation/Permeabilization Solution Kit (BD). Then the cells were stained with anti-IFN-γ (Clone XMG1.2), anti-IL-17 (Clone eBio17B7), and anti-IL-4 (Clone 11B11). The apoptotic status of lung cells was detected with the Apoptosis Detection kit (BD Pharmingen) following the instructions of the manufacturer. In this method, apoptosis was examined by the Annexin V/7-AAD double staining. All samples were analysed with FACSCalibur and FACSFortessa. Data were analysed with FlowJo.
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