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HLA-DR is a class II major histocompatibility complex (MHC) molecule that is primarily expressed on the surface of antigen-presenting cells, such as B cells, dendritic cells, and macrophages. It plays a crucial role in the presentation of extracellular antigens to CD4+ T cells, which is a key step in the adaptive immune response.

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3 protocols using hla dr

1

Multiparametric IHC for Immune Profiling

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For HLA-DR (Santa Cruz Biotechnology (sc-53319), 1:1,000)/SOX10 (LsBio (LS-C312170), 1:30), HLA-DR-DP-DQ-DX (Santa Cruz Biotechnology (sc-53302), 1:1,000)/SOX10, HLA-A (Santa Cruz Biotechnology (sc-365485), 1:1,300)/SOX10 and PD-L1 (Cell Signaling Technology #13684,1:500)/SOX10 dual IHC, tumour sections were stained overnight at 4 °C with both antibodies. Antigen retrieval was performed using Citrate Buffer (pH6) using a Biocare Decloaking Chamber. The visualization system utilized was MACH2 (Biocare) using DAB (Dako) and Warp Red (Biocare), and counterstained with hematoxylin.
For CD4 and CD8 staining, slides were placed on a Leica Bond Max IHC stainer. All steps besides dehydration, clearing and coverslipping are performed on the Bond Max. Heat-induced antigen retrieval was performed on the Bond Max using their Epitope Retrieval 2 solution for 20 min. Slides were incubated with anti-CD4 (PA0427, Leica, Buffalo Grove, IL) or anti-CD8 (MS-457-R7, ThermoScientific, Kalamazoo, MI) for 1 h. The Bond Polymer Refine detection system was used for visualization. CD4 and CD8 were scored as per cent of infiltrating CD4(+) or CD8(+) cells in the tumour area.
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2

Multiparametric Phenotypic Analysis of Cells

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For flow cytometry, harvested cells were stained for 30min with purified antibodies specific to CD16, CD74, TLR4, HLADR (Santa Cruz Biotechnology, Dallas, TX), or CD44 (BD Biosciences, San Jose, CA). Data were acquired on an LSR2 fluorescence activated cell sorter (BD Biosciences) and analyzed using FlowJo software (Treestar Inc., Ashland, OR). For in-cell western, cells were plated in 96-well plates and treated as indicated before fixation with methanol. Cells were probed with purified anti-CD74 antibody and donkey anti-goat DyLight 800-conjugated antibody (Thermo Fisher Scientific, Rockford, IL). Relative cell numbers were quantified using Sapphire700 (Li-Cor Biosciences, Lincoln, NE) and DRAQ5 (Thermo Fisher). Staining was visualized on an Odyssey CLx (Li-Cor).
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3

Negative Staining and Immuno-EM of SEV

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SEV fractions were adsorbed onto glow discharged carbon coated grids, washed in aqua bidest and negatively stained with 2% aqueous uranyl acetate. For immuno-EM, carbon-coated formvar grids were used and the immune reaction was performed after buffer wash including incubation with blocking agent (Aurion, Wageningen, The Netherlands), dilution series of primary antibody HLA-DR (Santa Cruz, Dallas, TX, USA #sc-51618) and Protein A-Au reporter (CMC, UMC Utrecht, The Netherlands). Micrographs were taken with a Zeiss EM 910 or EM 912 at 100 kV (Carl Zeiss, Oberkochen, Germany) using a slow scan CCD camera (TRS, Moorenweis, Germany).
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