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Total phosphatidic acid assay kit

Manufactured by Cell Biolabs

The Total Phosphatidic Acid Assay Kit is a quantitative colorimetric assay for the determination of total phosphatidic acid levels in biological samples such as cell lysates, tissue homogenates, or other relevant matrices.

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4 protocols using total phosphatidic acid assay kit

1

Quantifying Cellular Phosphatidic Acid Levels

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Cellular PA level was measured using Total Phosphatidic Acid Assay Kit (MET-5019, Cell Biolabs) according to the manufacturer’s instruction. Briefly, ~107 HEK293A cells were collected in 1 mL ice-cold PBS for sonication. Cells were then sonicated again by adding 1.5 mL methanol. After that, 2.25 mL 1 M NaCl and 2.5 mL chloroform were added into the sample and mixed thoroughly. Samples were centrifuged at 1,500 g at 4 0C for 10 min, and the lower organic phase was transferred to a glass vial, dried in a speedvac and dissolved in the provided Assay Buffer. PA samples together with the provided PA standards were transferred into a 96-well plate, where the provided Lipase Solution was added. After that, the plate was incubated at 37 0C for 30 min. The same amount of Detection Enzyme Mixture solution was added into each well and the fluorescent signal was detected using a microplate reader (excitation in the 530–560 nm range and emission in the 585–595 nm range). The PA concentration was determined by subjecting the fluorescent intensity value to the standard curve and the relative PA level was normalized.
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2

Quantifying Phosphatidic Acid Levels

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Total PA content was measured by a coupled enzymatic reaction system using the Total Phosphatidic Acid Assay Kit (Cell Biolabs, Inc., San Diego, CA.). Experimental procedures were performed according to the manufacturer’s protocol with minor modifications. In brief, vegetative gametophytes from blades approximately 20 mm in length (0.05 g FW) were cultured in a 100 mL culture medium containing 50 μM ACC for 0, 3, and 7d. Samples were then ground in liquid nitrogen with a pestle and mortar. For each sample, the resulting homogenate was added to 0.75 mL methanol. Next, we added 1.15 mL 1 M NaCl and 1.25 mL chloroform to each sample and mixed the constituents thoroughly. After centrifugation at 4 °C for 10 min at 1500×g, the upper aqueous phase was discarded, and the lower chloroform phase was washed twice with a PEU solution, which was prepared by mixing 50 mL chloroform, 50 mL methanol, and 45 mL 1 M NaCl. Finally, the lower organic phase was dried under a gentle stream of nitrogen and dissolved in the provided Assay Buffer. Fluorescent signals were detected using a spectrofluorometer (FB-750, Jasco, Tokyo, Japan) at an excitation wavelength of 540 nm and an emission wavelength of 590 nm. Relative PLD production was quantified as a ratio of that PLD production at 0 d after ACC treatment. All data are presented as mean ± SD of five biological replicates.
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3

Phospholipase D Activity Assay

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PLD1 activity was estimated using the Amplex Red phospholipase D assay kit (Thermo Fisher) according to the manufacturer’s protocol using a FilterMax F5 multimode microplate reader (Molecular Devices). Phosphatidic acid production was determined using the Total Phosphatidic Acid assay kit (Cell Biolabs) according to the manufacturer’s protocol using a FilterMax F5 multimode microplate reader. VU0359595 and VU0155069 were purchased from Santa Cruz Biotechnology and were used at 1 μM for 1 h before treatment.
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4

Quantifying Phosphatidic Acid in CaCO2 Cells

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Total phosphatidic acid content of CaCO2 cells treated with increasing concentration of MakA or DGKi, R59-022 was determined using the “Total Phosphatidic Acid Assay Kit” that measures total phosphatidic acid content (PA and LPA) in cell lysate samples by a coupled enzymatic reaction system (Cell BioLabs). Briefly, cells treated with vehicle, MakA or DGKi were collected after the treatment. A small portion of the cells was used for estimation of protein concentration with the BCA assay according to the manufacturer’s instructions (Bio-Rad). The rest of the sample was processed for extraction of lipids according to the manufacturers instruction (Cell BioLabs). After lipid extraction, the lipase from the kit was used to hydrolyze the phosphatidic acid to glycerol-3-phosphate. Next, the glycerol-3-phosphate product was oxidized by glycerol-3-phosphate oxidase (GPO), producing hydrogen peroxide. The hydrogen peroxide released from this reaction reacts specifically with the kit’s Fluorometric Probe and was detected at ex. 530–560 nm and em. 585–595 nm. Total phosphatidic acid content was normalized to the total protein.
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