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348 protocols using ts100

1

Histological Analysis of FGF5 in Rabbits

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Hematoxylin and eosin (H&E) staining and immunohistochemistry were performed, as previously described [26 (link)]. The skin tissues from FGF5 knockout and WT rabbits were fixed with 4% paraformaldehyde for 48 h, embedded in paraffin wax, and then sectioned. The skin sections were stained with hematoxylin and eosin (H&E) and analyzed by microscopy (Nikon ts100, Nikon Corporation, Tokyo, Japan). A primary antibody against FGF5 (1:200; 18171-AP Wuhan Sanying, China) was used for immunohistochemistry. The slides were imaged with a microscope (ts100; Nikon, Tokyo, Japan) and processed using Photoshop CS5 (Adobe, San Jose, CA, USA).
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Microscopic Imaging of Stem Cells

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Stained iPSCs and differentiated embryoid bodies were imaged by wide-field epifluorescence microscopy using a Nikon TS-100 (Nikon, Japan). Immunolabelled organoid sections were imaged using a laser confocal scanning microscope Nikon A1R (Nikon, Japan). Luxol Fast blue stained sections were imaged using a Nikon TS-100 under bright field microscopy. Sigma Aldrich, UK). Membranes were blocked with 5% milk in Tris buffered saline and Tween-20 (Sigma-Aldrich, UK) for 30 minutes and then incubated overnight at 4 o C with mouse monoclonal anti-thymidine phosphorylase antibodies (1:500, Abcam, UK) or with primary rabbit anti-human pan actin (1:1000, Sigma-Aldrich, UK). Membranes were then incubated with goat anti-mouse (1:10,000, Abcam, UK) and donkey anti-rabbit (1: 10,000, Jackson Laboratories, USA) conjugated with horseradish peroxidase for 1 hour at room temperature. Membranes were incubated with Immobilon Western (Millipore, USA) and CL-Xposure X-ray films, which were exposed for 20 seconds in a dark room.
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3

Evaluating Cell Migration and Wound Healing

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For wound-healing assays, three human hepatocarcinoma cell lines (Huh7.5, Bel-7402, and HepG2 cells) were seeded in 96-well plates. After 24 h, a scratch was made on the bottom of each well using sterile pipette tips. Washed twice with PBS, the cells were exposed to medium supplemented with or without EPS11. After incubation for 6 or 12 h, three fields of each wound were selected and photographed with an inverted microscope (NIKON TS100) equipped with a digital camera.
For transwell-migration assays, first, the lower compartment of transwell plates contained 0.6 ml of medium supplemented with 20% FBS. Hepatocellular carcinoma cells (Huh7.5, Bel-7402, and HepG2) were then resuspended in 100-μl medium containing 5% FBS with or without EPS11 and seeded into the upper compartment of each well. Cells were further incubated for 6 or 12 h to allow cell migration through the filter membrane to the lower side of the insert. After washed with PBS three times, cells were fixed with 95% ethanol and stained with 0.1% crystal violet. Then, the nonmigrated cells on the upper side of the insert were gently removed using cotton swabs, and the migrated cells on the lower side of the insert were observed and photographed by an inverted microscope (NIKON TS100).
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Visualizing Endothelial Barrier Function

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The devices were imaged using phase contrast (TS-100, Nikon) with a 10× air objective prior to starting treatment to examine the quality of endothelial seeding. After treatment under each condition, the HUVECs were imaged using phase contrast followed by fluorescence imaging using epifluorescence microscopy (473 nm excitation/488 nm emission, TS100, Nikon) with a 10× air objective to monitor the transendothelial transport of FITC conjugated 10 kDa dextran (Sigma). The fluorescence imaging was performed at 1 s intervals to capture the dynamic transendothelial transport of fluorescent tracer. Confocal microscopy was performed on the stained microdevices using a laser scanning confocal scope (A1R, Nikon) with a 40× oil immersion objective. A laser type light source was used to excite DAPI (blue), phalloidin (green) and CD31 (red). Furthermore, confocal reflectance microscopy was used to visualize the 3D structure of the collagen matrix.
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5

Scratch Assay for Cell Migration

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A scratch was generated using a 10 µl pipette tip when cells in a 6-well plate reached 80% confluence. Subsequently, the cells were cultured in serum-free medium for 48 h. The scratch area was observed under a microscope (TS100, Nikon Corp.) at 0 and 48 h. In total, 10 fields of the scratch area of each group were selected to be observed under a microscope (TS100, Nikon Corp.) for statistical analysis conducted by SPSS 19.0 software (SPSS, Inc.).
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6

Histology Evaluation of Sciatic Nerve Regeneration

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As for histology evaluation, animals were euthanized and sciatic nerve was dissected after 12 weeks post implantation. Nerve specimens were fixed with 4% paraformaldehyde for 6 h, dehydrated with ethanol and embedded in paraffin. Then, the samples were cut into 5 μm sections, stained with hematoxylin-eosin (HE), and observed by light microscope (TS100, Nikon, Japan). The regeneration of axon and myelin sheath in sciatic nerve were evaluated by toluidine blue staining. After euthanization, the nerve segments were picked out and fixed with 2.5% glutaraldehyde 2 h, then fixed with 1% osmium tetroxide for 2 h, dehydrated by ethanol and embedded in Epon812. Semi-thin sections were obtained using a glass knife, stained with toluidine blue and observed by light microscope (TS100, Nikon, Japan).
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7

Colony Formation Assay in HepG2 Cells

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HepG2 cells treated with siNEIL3 or scramble were seeded onto 24-well plates at 1x103 cells/well and cultured for ten days at 37˚C in a humid environment with 5% CO2. Next, cell colonies were fixed in 4% paraformaldehyde (Beyotime Institute of Biotechnology) at room temperature for 30 min, washed with cold PBS, and stained with 0.5% crystal violet (Beyotime Institute of Biotechnology) at room temperature for 15 min. Next, positively-stained cancer cells were counted under a light inverted microscope (NikonTS100; Nikon Corporation) at x100 magnification. The relative colony formation ability was evaluated by counting the positively-stained clones in each well and the number of clones was presented as a bar graph.
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8

Quantifying Lipid Accumulation in 3T3-L1 Adipocytes

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The intracellular lipid contents of 3T3-L1 adipocytes were determined by Oil Red O staining [33 (link)]. Briefly, differentiated 3T3-L1 cells were washed twice with PBS and fixed with 10% formaldehyde for 1 h. After another washing with PBS, the fixed cells were stained with 0.5% Oil Red O in 3:2 of Oil Red O/H2O for 15 min at room temperature and then washed with 60% isopropanol and distilled water. The lipid content was imaged with an inverted light microscope Nikon TS100 (Tokyo, Japan). Finally, 100% isopropanol was used to elute Oil Red O dye and it was quantified at 492 nm absorbance.
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9

Wound Healing Assay with Mitomycin C

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In order to inhibit cell proliferation, cells were cultured with mitomycin C (10 μg/ml; Sigma, St. Louis, MO, USA) in 6-well plates (3×106/well). Subsequently, a straight wound was generated using a 200 μl sterilized pipet tip and the cells were washed twice with PBS to remove nonadherent cells. Wound healing was observed at 0, 24, 48 and 72 h under a microscope (Nikon TS100; Nikon, Tokyo, Japan), and relative motility was calculated according to the following formula: Relative motility = (initial distance-a time-point distance)/initial distance × 100%. A time-point distance could be 24, 48, 72 h (Fig. 2C).
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10

Turbidity Analysis of Sodium Caseinate Micelles

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Subsequently, turbidity of NaCNs samples prepared with different concentrations and at different mixing duration was measured to analyze the possible effect of concentration and time on the formation of micelles, at 400 nm using a UV-Vis Spectrophotometer. Turbidity measurement is an indirect method to determine the concentration and time-dependent changes in optical density due to micellar growth in a supersaturated solution [31 (link)]. For turbidity analysis, different amounts of sodium caseinate (0.125, 0.25, 0.50, 1, 2, 4, 6, 8 and 10 mg) were added to 1 mL of distilled water in Eppendorf tubes. Nine samples were prepared, as stated above and placed on the nutating mixer. After a 1 h of mixing, the samples absorbance was measured at 400 nm (optimized) [32 (link)]. Similar procedure was followed after 2, 4 and 8 h of incubation. All measurements were performed at 25 °C in triplicates with the results reported as mean (±SD).
To observe the aggregation patterns among micelles prepared with different concentrations, optical images were taken using an optical microscope (Inverted trinocular microscope Nikon TS100, Minato-Ko, Tokyo, Japan) at a scale bar of 100 μm and a magnification of 10×. Following micelles formation, the samples were transferred to a six well plates, and then microscopic images were taken.
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