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Amido black

Manufactured by HiMedia
Sourced in India

Amido black is a protein stain used in biochemistry and molecular biology to detect and visualize proteins in electrophoresis gels or on membranes. It binds non-specifically to the peptide backbone of proteins, allowing their detection and quantification.

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3 protocols using amido black

1

Quantifying Aspartyl Protease Activity in C. albicans

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C. albicans isolates’ aspartyl protease activities were evaluated by a previously described method [27 (link), 29 (link)]. Aliquots (5 μL) of standardized fungal inoculum of the previously mentioned antifungal-treated and control suspensions were spot inoculated aseptically onto 1% w/v bovine serum albumin (Levochem, N.Y., U.S.A.) agar plates, which were left to dry out and then incubated at 37 °C for 5 days. Further proteolytic activity was stopped using 20% w/v trichloroacetic acid (S D Fine-Chem Limited, Mumbai, India) and plates were stained with 1.25% w/v amidoblack (Hi- Media, Mumbai, India) and checked for the presence of proteolysis zone around the colonies, which was not stained with amidoblack. The protease index (Prz) was measured in terms of the ratio between the diameters of unstained zone and the colony [23 (link)]. Each assay was conducted in quadruplicate on two individual experiments. C. albicans ATCC 10231 was the positive control strain for the experiment. Results for this test were expressed as the percentage reduction in aspartyl protease production applying the following formula: Aspartyl protease reduction%=1Przassay/Przcontrol×100
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2

Proteinase Activity Assay in Candida

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A modification of the method as proposed by Staib12 (link) was followed for detection of the proteinases. The yeast suspension (10 μl) was aliquoted into the wells punched onto the surface of the bovine serum albumin medium (HiMedia) and incubated at 37°C for two days. The plates were fixed with 20 per cent trichloroacetic acid and stained with 1.25 per cent amido black (HiMedia) followed by decolourisation with 15 per cent acetic acid. The plates were examined for opaqueness of the agar, corresponding to a zone of proteolysis around the wells. The diameter of unstained zones around the well was considered as a measure of proteinase production. The proteinase activity (Pz) was determined in terms of the ratio of the diameter of the well to the diameter of the proteolytic unstained zone. When Pz=1, no proteinase activity was detected in the strain. Candida albicans ATCC 10231 was used as a positive control.
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3

Quantifying Candida Aspartyl Protease Activity

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Candida isolates’ aspartyl protease activities were evaluated as previously reported [31 (link)]. The degradation of bovine serum albumin (BSA) was measured. Ten microliters of test isolate containing 106 CFU/mL were inoculated onto 1% w/v BSA (Levochem, New York, NY, USA) agar plate. The incubation conditions were maintained at 37 °C for five days. Further protease activity was suppressed by adding 20% w/v trichloroacetic acid after incubation (S D Fine-Chem Limited, Mumbai, India), and the plate was stained with 1.25% w/v amido black (Hi-Media, Mumbai, India). Proteolytic activity was demonstrated by a zone of proteolysis encircling the colony that could not be stained with amido black. The protease index (Prz) was calculated by dividing the colony diameter by the diameter of the unstained zone. A Prz value of one indicates no protease activity, while a Prz value lower than one indicates that the tested isolate expresses aspartic protease. The higher the aspartic protease activity, the lower the Prz value [32 ]. The assay was repeated three times for each isolate. As a positive control, C. albicans ATCC 10231 was used.
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