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5 protocols using ds ril u2

1

Evaluating Antifungal Activity of PCA

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The sensitivity of P. noxius to PCA was assessed in PDA plates. Mycelial discs (5 mm) were removed from one-week-old PDA plates and placed in the center of a 90-mm-diameter petri plate containing PDA plates supplemented with six different concentrations of PCA (1.25, 2.5, 5, 10, 20, and 40 μg/mL), these plates without PCA as control. Each treatment was performed in triplicate. The petri plates were incubated at 30 °C for 9 days, and radial growth was measured at the end of the trial. Growth inhibition of P. noxius by PCA was quantified as described previously [9 (link)].
For PDB medium, 150 mL conical flasks containing 40 mL of potato dextrose broth (PDB) supplemented with five different concentrations of PCA (1.25, 2.5, 5, 10, and 20 μg/mL) were inoculated with mycelial discs (5 mm), excised from one-week-old PDA plates with chloroform/methanol (0.1%, v/v) as control. Each treatment was performed in triplicate. Flasks were incubated on a rotary shaker (220 rpm) at 30 °C for 6 days. After 72 h, mycelia were examined under optical microscopy (Nikon DS-Ril-U2, Tokyo, Japan). At the end of the incubation period, mycelia were collected from each flask, dried at 80 °C, and then weighed.
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2

Immunofluorescence Assay for ECM Proteins

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Human RPE cells were fixed with 4% paraformaldehyde for 20 min at 23°C, washed three times with PBS and permeabilised using 0.5% Triton X-100 for 15 min at 23°C. The cells were subsequently blocked with 10% goat serum (Zhongshan Golden Bridge Biotechnology) for 1 h at 23°C before incubation with rabbit anti-fibronectin (dilution, 1:100) or rabbit anti-collagen I (dilution, 1:100) primary antibodies, which were diluted in PBS supplemented with 10% goat serum, overnight at 4°C. The next day, the cells were incubated with TRITC-conjugated goat anti-rabbit IgG (dilution, 1:200) secondary antibodies at room temperature for 1 h. The samples were counterstained with DAPI (1:1,000; cat. no. D9542, Sigma-Aldrich; Merck KGaA) at room temperature for 10 min. The samples were examined using a fluorescence microscope (DS-Ril-U2; Nikon Corporation) and photographed at ×200 magnification in five random fields (DS-U2; Nikon Corporation).
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3

Immunofluorescence Analysis of Diabetic Retinopathy

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The fibrovascular membranes (FVMs) of T2DM patients with PDR (26 cases) were surgically detached through membrane peeling during pars plana vitrectomy. ERM resections were carried out on 26 idiopathic ERM patients as control. As Table 1 shows, significant differences in age and gender were not detected between the groups.
Samples of ERMs were embedded in an ideal cutting compound, fast frozen, and preserved at -80°C within 1h following collection of the fresh samples. The following primary antibodies were used for immunofluorescence staining: anti-GLP-1R polyclonal IgG (Abcam, ab214185, 1:300) and anti-SGLT2 polyclonal IgG (Abcam, ab180799, 1:200). DAPI (Sigma-Aldrich, D9542, 1:1000) was used for visualization of the nuclear morphology. Immunofluorescence staining was examined and images were captured under a fluorescence microscope (DS-Ril-U2; Nikon, Japan)
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Immunofluorescence Staining of FVM Tissues

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Immunofluorescence staining was performed on the frozen sections of the FVMs by staining with the following antibodies: rabbit anti-EPO polyclonal IgG (1:150 dilution; No. ab126876 Abcam, Cambridge, MA, USA), mouse anti-CD105 monoclonal IgG (1:150 dilution; No. ab69772 Abcam, Cambridge, MA, USA), rabbit anti-VEGF polyclonal IgG (1:200 dilution; No. ab39250 Abcam, Cambridge, MA, USA), tetramethylrhodamine isothiocyanate- conjugated goat anti-mouse IgG (1: 200 dilution; Zhongshan Goldenbridge Biotechnology Co. Ltd., Beijing, China), and/or fluorescein isothiocyanate- conjugated goat anti-rabbit IgG (1: 200 dilution; Zhongshan Goldenbridge Biotechnology Co. Ltd.). The samples were counterstained with 4′,6′-diamino- 2-phenylindole (DAPI) (1: 1,000 dilution, No. D9542; Sigma-Aldrich, St. Louis, MO, USA). All the sections were examined using a fluorescence microscope (DS-Ril-U2; Nikon, Tokyo, Japan) and photographed (DS-U2; Nikon).
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Immunofluorescence Analysis of PDR Membranes

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IF staining was performed on 14 PDR membranes, which are seven samples from IVB treatment group, and seven samples from non-treatment group in 10 μm thick frozen sections. We used antibodies against the following antigens: TGFβ2 (1:200 dilution, ab113670, Abcam, Cambridge, Massachusetts, USA), CTGF (1:200 dilution, ab66218, Abcam), CNTF (1:200 dilution, ab66218, Abcam), VEGF (1:200 dilution, ab1316, Abcam) and vimentin (1:150 dilution, Zhongshan Golden Bridge Biotechnology, Beijing, China). Samples were counterstained with DAPI (1:1000 dilution, D9542, Sigma-Aldrich, USA). Sections were examined and photographed using a fluorescence microscope (DS-Ril-U2, Nikon, Tokyo, Japan).
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