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Miscript nucleics mix

Manufactured by Qiagen

The MiScript Nucleics Mix is a reagent designed for the reverse transcription and real-time PCR amplification of miRNA and other small RNA molecules. It contains all the necessary components for the efficient conversion of RNA into cDNA and subsequent quantitative PCR analysis.

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3 protocols using miscript nucleics mix

1

Quantitative Analysis of miRNA Expression

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Reverse transcription was carried out using a miScript II RT Kit (Qiagen). A 20 μL reverse transcription reaction was prepared with 2.2 μL of eluted miRNA, 4 μL 5× miScript HiSpec Buffer (Qiagen), 2 μL 10× miScript Nucleics Mix (Qiagen), 9.8 μL RNase-free water, and 2 μL miScript Reverse Transcriptase Mix (Qiagen). The reaction was incubated at 16 °C for 60 min followed by 95 °C for 5 min. The reverse transcription reaction was then diluted with 200 μL RNase-free water. Triplicates of qPCR reactions were carried out using miScript SYBR Green PCR Kit (Qiagen) and run on a StepOnePlus™ Real-Time PCR System (Applied Biosystems). The reaction contained 2 μL diluted cDNA, 12.5 μL 2× QuantiTect® SYBR Green PCR Master Mix (Qiagen), 2.5 μL 10× miScript Universal Primer (Qiagen), 10× miScript Primer Assay (Qiagen) for the target miRNA, and 5.5 μL RNase-free water in a final volume of 25 μL. The reaction mixtures were incubated for 15 min at 95 °C, followed by 45 cycles of 94 °C for 15 s, 55 °C for 30 s, and 70 °C for 30 s. Standard curves were generated from a series of dilutions for the target miRNA (synthetic miScript miRNA Mimics from Qiagen) for each plate (Supplementary Fig. 13). Quantitation cycle (Cq) values were acquired and analyzed using StepOne™ Software v2.3 in accordance with the MIQE guidelines43 (link).
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2

RNA Isolation and cDNA Synthesis

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Total RNA was isolated using the miRNeasy Mini Kit (Qiagen Inc., Valencia, CA). Cells were homogenized in QIAzol lysis reagent. Afterwards, chloroform was added and samples were centrifuged in order to separate aqueous and organic phases. The aqueous phase was extracted and combined with ethanol in order to facilitate RNA binding to miRNeasy Mini spin columns. Samples were washed twice in buffer and total RNA was eluted using RNase-free water. cDNA was synthesized by adding RNA to a mixture of miScript Reverse Transcriptase Mix, 10× miScript Nucleics Mix, and 5× miScript HiFlex Buffer (Qiagen). The mixture was incubated at 37°C for 60 minutes, then at 95° C for 5 minutes in order to convert RNA to cDNA.
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3

miRNA Quantification via qRT-PCR

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For the quantification of miRNA, qRT-PCR was performed on each extracted sample. Reverse transcription was carried out using a miScript II RT Kit (Qiagen). A 20 μL reverse transcription reaction was prepared with 2μL of eluted miRNA, 4μL 5× miScript HiSpec Buffer (Qiagen), 2μL 10× miScript Nucleics Mix (Qiagen), 10μL RNase-free water, and 2μL miScript Reverse Transcriptase Mix (Qiagen). The reaction was incubated at 37°C for 60 min, followed by 95°C for 5 min. The reverse transcription reaction was then diluted with 200 μL RNase-free water. Triplicates of qPCR reactions were carried out using the miScript SYBR Green PCR Kit (Qiagen). The reaction contained 2μL diluted cDNA, 12.5 μL 2× QuantiTect® SYBR Green PCR Master Mix (Qiagen), 2.5 μL 10× miScript Universal Primer (Qiagen), 10× miScript Primer Assay (Qiagen) for the target miRNA, and 5.5 μL RNase-free water in a final volume of 25 μL. The reaction mixtures were incubated for 15 min at 95°C, followed by 45 cycles of 94°C for 15 s, 55°C for 30 s, and 70°C for 30 s.
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