For ssRNA synthesis, the ACT200 fragment was amplified with primer pair act200-F/T7act200Rev (see
Nanophotometer
The NanoPhotometer is a compact and precise spectrophotometer designed for the measurement of nucleic acids and proteins. It utilizes a LED light source and a CCD detector to provide accurate and reliable absorbance measurements in the UV-Vis range.
Lab products found in correlation
943 protocols using nanophotometer
In vitro Synthesis of dsRNA and ssRNA
For ssRNA synthesis, the ACT200 fragment was amplified with primer pair act200-F/T7act200Rev (see
Silencing Serpin7 Gene in Locusts
Twenty‐five female L. migratoria were selected from each photoperiod within 24 h after adults were injected with 10 μL serpin7 dsRNA (μg·μL−1) between the third and fourth abdominal segments. Double‐distilled water (ddH2O) as control was injected in a similar manner to the selected females. Dissecting the whole bodies of dsRNA‐injected and control group’s adult locusts after 36 h, we obtained hind leg, ovary and fat body. The efficiency of RNAi‐mediated knockdown was determined with real‐time quantitative PCR (RT‐qPCR).
Colorimetric Ascorbic Acid Quantification
Automated Genomic DNA Extraction
Histone H3 Methylation Analysis
Darmstadt), methanol, and acetic acid (VWR, Vienna, Austria) were
used in all experiments. As model peptides, C-terminal GK-biotinylated
histone H3 sequences (amino acid residues 21 to 44) without and with
native modifications (mono-, di-, and trimethylation) at K27 were
purchased (AnaSpec, Fremont, CA, USA) with a purity of >95%, in
which
K27 of the full-length histone corresponds to K7 of the model peptides.
Peptides were desalted using MWCO 2000 Vivaspin centrifugal concentrators
(Sartorius, Göttingen, Germany) at 7900 rcf, 6× ammonium
acetate 100 mM (Sigma, Vienna, Austria), and 6× H2O. Peptide concentration was determined by UV absorption at 280 nm
using an Implen Nano PhotometerTM (Implen, München, Germany).
For electrospray ionization, equimolar mixtures (0.1 μM each)
of unmodified (referred to as “wild-type” in the text),
mono-, di-, and trimethylated peptides (referred to as “K7
1m”, “K7 2m”, and “K7 3m”, respectively)
in 50:50 H2O/CH3OH and 1% vol CH3COOH, pH ∼ 3.0 were prepared from 100 μM stock solutions
of each peptide in H2O.
Histone H3 Peptide Modification Analysis
Darmstadt, Germany), methanol, and acetic acid (VWR, Vienna, Austria)
were used in all experiments. C-terminal GK-biotinylated histone H3
sequences (amino acid residues 21–44) with native modifications
(acetylation at K27 and trimethylation at K36) were purchased (AnaSpec,
Fremont, CA, USA) with a purity of >95%, in which K27 of the full-length
histone corresponds to K7 of the model peptides and K36 in the histone
corresponds to K16 in the peptides.
Peptides were desalted using
MWCO 2000 Vivaspin centrifugal concentrators (Sartorius, Göttingen,
Germany) at 7900 rcf, 6× ammonium acetate 100 mM (Sigma, Vienna,
Austria), and 6× H2O. Peptide concentration was determined
by UV absorption at 280 nm using an Implen Nano PhotometerTM (Implen,
München, Germany). For electrospray ionization, equimolar mixtures
(0.2 μM each) of acetylated and trimethylated peptides (referred
to as “K7 Ac” and “K16 3m”, respectively,
in the text) in 50:50 H2O/CH3OH and 1% vol CH3COOH, pH ∼ 3.0 were prepared from 100 μM stock
solutions of each peptide in H2O.
Genomic DNA Extraction from Samples
Genomic DNA Extraction from Thrips
DNA and Total RNA Isolation
DNA was resuspended in 40mM NaOH (Merck Life Science, Dorset, UK) and RNA was resuspended in RNase-free water; both were quantified using a NanoPhotometerTM (Implen, München, Germany). Extracts were stored at –20 °C and –80 °C, respectively.
Serum RNA Extraction and cDNA Synthesis
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