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Anti psd95

Manufactured by Cell Signaling Technology
Sourced in United States, China, United Kingdom

Anti-PSD95 is a laboratory reagent used for the detection and analysis of the PSD-95 protein. PSD-95 is a key scaffolding protein found in the post-synaptic density of neuronal cells and plays a crucial role in the organization and function of the neuronal synapse. The Anti-PSD95 product provides a specific and reliable tool for researchers to study the localization, expression, and interactions of the PSD-95 protein in various experimental contexts.

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51 protocols using anti psd95

1

Aβ Peptide Preparation and Antibody Analysis

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Amyloid beta (Aβ) 1–42 and scrambled Aβ peptide were from rPeptide. Dimethyl sulfoxide (DMSO) was from Fisher Scientific. Okadaic acid was from Sigma. The antibodies used in this study were purchased from Santa Cruz Biotechnology (anti-PSD95), GenScript Corporation (anti-Gapdh), Millipore (anti-puromycin), Abcam (anti-synapsin-I, anti-PSD95, anti-p-eIF4E and anti-MAP2) and Cell Signaling (anti-eIF2A, anti-p-eIF2A, anti-eIF4E, anti-PDI, anti-FMRP, anti-eEF2, anti-p-eEF2, anti-PP1, anti-PP2A-A, anti-PP2A-B, and anti-PP2A-C). HRP-conjugated secondary antibodies were from Cell Signaling and Jackson ImmunoResearch.
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2

Comprehensive Antibody Panel for Western Blotting

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The following antibodies were used for western blotting: mouse anti-PrP [1:10,000, POM19, amino acids 201–225; POM1 (Polymenidou et al., 2008 (link))]; anti-beta actin (1:5000, Genetex); anti-GAPDH (1:5000, Novus Biologicals #NB300–221SS); anti-αtubulin (1:1000, Cell Signaling Technologies #3873); anti-synapsin I (1:10,000, Fisher Scientific #AB1543MI); anti-synaptophysin (1:10,000, Invitrogen #MA1213); anti-phosphorylated synapsin I (1:1000; Cell Signaling Technology; #2311); anti-PSD-95 (1:5000, Cell Signaling Technology #3450); anti-SNAP25 (1:10,000, Cell Signaling Technology #5308); anti-mGluR5 (1:5000, Cell Signaling Technology #55920); anti-phosphorylated GluA1-S845 (1:1000, Cell Signaling Technology #8084); anti-GluA1 (1:1000, Cell Signaling Technology #13185); anti-Arc (1:2000, Proteintech #16290–1-AP); anti-EGR1 (1:1000, Cell Signaling Technology #4154); anti-EGR2 (1:1000, Novus Biologicals #NB110–59723SS); anti-Homer1 (1:1000, Cell Signaling Technology #8231); anti-GluN1 (1:1000, Cell Signaling Technology #5704).
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3

Molecular Markers in Neurodegeneration

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The following antibodies were used in western blot and immunofluorescence studies: p-AMPK, AMPK p-CREB (Cell Signaling), anti-Nrf-2, anti-PSD-95, anti-Syntaxin, anti-synaptosomal-associated protein 23 (SNAP-23), anti-Caspase 3, anti- PARP-1, anti-Cleaved Caspase-3, Synaptophysin, anti-Bax, anti-Bcl2, anti-TNF-α, anti-IL-1β, anti-p-NF-κB, anti-Iba-1, anti-GFAP, and anti-β-actin, which were all obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Primary antibodies were diluted in 1× TBST (Tris-buffered saline plus Tween) (1:1000), and secondary conjugated anti-mouse horseradish peroxidase (HRP) and conjugated anti-rabbit HRP were diluted 1:10,000 in 1× TBST, all purchased from Promega USA. For confocal microscopic studies, the secondary fluorescent antibodies used were goat anti-mouse and goat anti-rabbit diluted in 1 × 100 phosphate-buffered saline (PBS).
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4

Quantitative Immunoblotting of Synaptic Proteins

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On D4, D5, and D6, the cells were washed with ice-cold PBS (Invitrogen). Cell lysates were prepared using RIPA buffer, as previously described [30 (link)]. Equal volumes of cell lysates were applied to SDS-PAGE, and transferred to PVDF for immunoblotting [30 (link)]. The following antibodies were used at 1/1000 dilution: anti-synaptophysin (Cell Signaling 4329S), anti-SNAP25 (Santa Cruz sc-7538), anti-PSD95 (Cell Signaling, 2507S), anti-GAP43 (Cell signaling, 8945S), and anti-β-tubulin (Sigma T5201). Secondary antibodies, anti-mouse HRP-linked, and anti-rabbit HRP linked from Cell Signaling and anti-goat HRP-linked from Santa Cruz were used to detect the bands with Supersignal chemiluminescence ECL kit (Millipore, Molsheim, France). Gel images were obtained while using the Fusion Imaging System (Fusion Fx5; Vilber Lourmat, France), and densitometric analysis was performed using the freeware ImageJ.
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5

Alzheimer's Disease Model in 5xFAD Mice

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5xFAD mice were obtained from Jackson lab and were bred in accordance with Emory Medical
School guidelines. The 5xFAD mice received vehicle or CF3CN dissolved in 5%
DMSO/0.5% methylcellulose at a dose of 3 or 10 mg/kg/day. Mice were housed in AAALAC
(American Association for Accreditation of Laboratory Animal Care)-Accredited facilities,
and this study was approved by the institutional Animal Care and Use Committees at Emory
University.
Anti-TrkB antibody was bought from Biovision (Milpitas, CA). Antiphospho-TrkB Y816
antibody was raised against [H]-CKLQNLAKASPV-pY-LDILG-[OH] (a.a. 806–822) (EM437
and EM438) as rabbit polyclonal antibody. Anti-synaptotagmin, anti-Aβ, and
antitubulin were from Sigma-Aldrich (St Louis, MO). Anti-Akt, anti-p-Akt, anti-ERK,
anti-p-ERK1/2, anti-synapsin I, anti-PSD95, and antispinophilin antibodies were bought
from Cell Signaling (Boston, MA). The Histostain-SP kit and the Aβ 1-42 ELISA kit
was from Invitrogen (Grand Island, NY). All chemicals not included above were purchased
from Sigma-Aldrich.
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6

Immunofluorescence Analysis of Neuronal Markers

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Immunofluorescence was performed following previous studies in which rats anesthetized to death were immobilized by heart perfusion with 0.9% saline and 4% paraformaldehyde [33 (link)]. After repeated perfusion to the anatomy of the brain tissue after the rat body stiffened, the prefrontal regions, such as the coronal section, in turn in 20%, 25%, and 30% sucrose-fixed dehydration, gel embedding, freezing, the parts with cryostat coronary frozen section (10 microns), membrane breaking, repair, washing with phosphate-buffered saline (PBS) 3 times and sealed with 5% sheep serum. The slices were incubated for 12 h in anti-GluA1 (1:200, Cell Signaling, #13185, Shanghai, China), anti-BDNF (1:200, Abcam, ab108319, Shanghai, China), and anti-PSD-95 (1:200, Cell Signaling, #3450, Shanghai, China) at 4°, then incubated at constant temperature in the second antibody for an hour. Finally, the nuclei were stained with DAPI (Solarbio, C0065, Beijing, China), and the immunofluorescence of the treated specimens was observed by fluorescence microscope (Olympus Corporation, Japan). The secondary antibody used was Alexa Fluor 488-conjugated Goat Anti-Rabbit IgG (1:200, Proteintech, SA00006-2, Wuhan, China) and Alexa Fluor 594-conjugated Affinipure Goat Anti-Mouse IgG (1:200, Proteintech, SA00006-3, Wuhan, China).
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7

Immunoblotting for Synaptic Protein Analysis

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Samples were lysed in TEN buffer containing 50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 2 mM EDTA, and 1% NP-40, supplemented with protease inhibitors and phosphatase inhibitors. Protein concentration was determined by BCA assay (BCA Protein Assay Kit, Thermo Fisher Scientific). Equal amounts of protein samples were subjected to SDS-polyacrylamide gel electrophoresis and PVDF membrane transfer. Proteins were identified by incubating with indicated primary antibodies and then with appropriate HRP-conjugated secondary antibodies. Protein band intensities were determined using the Image J software [45 (link)]. Antibodies used were: anti-GAPDH (Abways, ab0037), anti-PSD93 (Abcam, ab151721), anti-PSD95 (Cell Signaling Technology, 3450 S), anti-Akt (Cell Signaling Technology, 9272 S), anti-phosphorylated Akt (Cell Signaling Technology, 9271 S), and HRP-conjugated secondary antibodies (Thermo Fisher Scientific, 31430 and 31460).
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8

Hippocampal Protein Expression Analysis

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At 24 h after DEX injection, bilateral hippocampi of P8 pups for GDNF/NCAM/CREB analysis (n=5 per group) and P35 pups for PSD95/GAP43 analysis (n=5 per group) were rapidly harvested, flash-frozen, and stored at −80°C until use. Frozen hippocampi were cut and then lysed on ice for 30 min. The lysate was centrifuged and total protein concentration measured using a BCA Protein Assay Kit (P0010; Beyotime, China). Equal amounts of protein per gel lane were separated by electrophoresis using 12.5% SDS-polyacrylamide gels and electrotransferred to polyvinylidene fluoride membranes (IPVH0010; Millipore, Germany). The membranes were blocked in 5% non-fat milk diluted in Tris-buffered saline with Triton X (TBST) for 1 h, incubated with the indicated primary antibodies overnight at 4°C, and then incubated in secondary antibodies for 2 h at room temperature. Protein bands were visualized and photographed using SuperSignal R West Pico Chemiluminescent Substrate (34080; Thermo, USA) and a GE Amersham Imager 600. The primary antibodies used were anti-GDNF (1:500 Ab18956; Abcam, Cambridge, UK), anti-NCAM (1:1000, 3606S; Cell Signaling Technology, Danvers, MA, USA), anti-PSD95 (1:1000, 3450S; Cell Signaling Technology), anti-GAP43 (1:1000, 8945S; Cell Signaling Technology), and anti-CREB (1:1000, 9197S; Cell Signaling Technology).
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9

Western Blot Analysis of Synaptic Markers

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Samples were homogenized and incubated in PBS containing 1% Triton X-100, supplemented with protease inhibitor mix and PhosSTOP (Roche). Equal amounts of protein (by Bradford assay) were resolved by SDS-PAGE and transferred to PVDF membranes. After the membranes were blocked, proteins were detected with primary antibody for overnight at 4°C. Membrane was probed with LI-COR IRDye secondary antibodies and detected using the Odyssey infrared imaging system (LI-COR). The following antibodies were used in this study: anti-PSD-95 (Cell Signaling), anti-synaptophysin (Millipore), anti-GFAP (Millipore) and anti-β-actin (Sigma) antibodies. Levels of PSD-95, and GFAP were also determined by enzyme-linked immunosorbent assay (ELISA) as previously described (Shinohara, et al., 2013 (link)).
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10

Retinal Protein Extraction and Analysis

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Whole eyes without cornea and lens, dissected neural retina, or dissected posterior eyecups enriched in RPE and choroid were lysed in ice-cold HNTG lysis buffer (50 mM HEPES, pH 7.4, NaCl 150 mM, 10% glycerol, and 1% Triton X-100) supplemented with 1 mM phenylmethylsulfonyl fluoride and 1% protease inhibitor cocktail. Cleared lysates were subjected to standard SDS-PAGE, immunoblotting, and signal detection on autoradiography film using enhanced chemiluminescence (Lightning Plus; Perkin Elmer, Shelton, CT, USA). Primary antibodies were to: rhodopsin B630, blue opsin (Millipore-Sigma; #5407), red/green opsin (Millipore-Sigma; #5405), GAPDH (Genetex, Irvine, CA, USA; #GTX100118), gal-3, MerTK (R&D Systems; #AF591), RPE65 (Genetex; #GTX103472), and anti-PSD95 (Cell Signaling, Danvers, MA, USA; #S4507). Image-J software was used to quantify relative densities of bands.
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