The largest database of trusted experimental protocols

Lysotracker red dnd 99 solution

Manufactured by Thermo Fisher Scientific

LysoTracker Red DND-99 solution is a red-fluorescent dye that stains acidic organelles, such as lysosomes, in live cells. It can be used to label and track the location of these organelles in various cellular applications.

Automatically generated - may contain errors

2 protocols using lysotracker red dnd 99 solution

1

Quantifying Drosophila Hemocyte Phagocytosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
To quantify circulating hemocytes, L3 wandering larvae were dissected on 12-spot microscope slides (Hendley-Essex, Essex, UK) in Drosophila Ringer’s solution containing 0.01% 1-phenyl-2-thiourea (Sigma Aldrich). Hemocytes were left to adhere for 45 min, and then fixed with acetone for 6 min. Samples were mounted with PBS-glycerol and were analyzed with a Zeiss Axioskope 2 MOT microscope (Carl Zeiss) using phase contrast mode. For phagocytosis experiments, L3 wandering larvae were washed in Drosophila Ringer’s solution, and placed on a dry paper towel. Larvae were injected with FITC-labeled E. coli using a glass capillary. After 1 hr, larvae were dissected on 12-spot microscope slides in Drosophila Ringer’s solution containing 0.01% 1-phenyl-2-thiourea. Hemocytes were left to adhere for 45 min, then lysosomes were stained with 0.1 µM LysoTracker Red DND-99 solution (Thermo Fisher) for 5 min. Surface-bound bacteria were quenched with 0.4% trypan blue solution, and samples were analyzed on an Olympus FLUOVIEW FV1000 confocal laser scanning microscope (Olympus, Tokyo, Japan).
+ Open protocol
+ Expand
2

Visualizing Autophagy Dynamics in Zebrafish

Check if the same lab product or an alternative is used in the 5 most similar protocols
For visualization of Lc3 dynamics, Tg(CMV:EGFP-map1lc3b) larvae were embedded in 1.5% low-melting-point agarose (weight per volume, in egg water) and imaged using a Leica TCS SPE confocal microscope. Imaging was performed using a ×63 oil immersion objective (HC PL APO CS2, numerical aperture [NA] of 1.42) in a region of the tail fin to detect enhanced GFP (EGFP)-map1lc3b (GFP-Lc3)-positive vesicles. For quantification of acidic vesicles in the presence and absence of infection, larvae were immersed in embryo medium containing 5 μM LysoTracker Red DND-99 solution (Thermo Fisher Scientific) for 1 h. Before mounting and imaging, larvae were washed three times with embryo medium. To determine colocalization between Mm and GFP-Lc3 or LysoTracker, fixed (GFP-Lc3) or live anesthetized (LysoTracker) larvae were embedded in 1.5% low-melting-point agarose (in egg water) and imaged in the caudal hematopoietic tissue using a Leica TCS SP8 confocal microscope with a ×40 water immersion objective (HCX APO L U-V-I, NA of 0.8). Images were obtained using Leica Las X software. For the quantification of GFP-Lc3 levels, the find maxima algorithm with a noise tolerance of 50 was used in Fiji software version 1.53c. To determine association of GFP-Lc3 or LysoTracker with bacteria, manual counting was performed on the obtained confocal images using Leica Las X software.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!