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Uorescence microscope

Manufactured by Nikon
Sourced in Japan

The Nikon fluorescence microscope is an optical instrument that uses fluorescence to produce high-contrast images of specimens. It functions by illuminating the sample with a specific wavelength of light, causing fluorescent molecules within the sample to emit light at a different wavelength. This emitted light is then captured and magnified by the microscope's lens system, allowing for the visualization of cellular structures and other fluorescent-labeled components.

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44 protocols using uorescence microscope

1

Detecting Liver Oxidative Stress Using Dihydroethidium

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The frozen liver tissue blocks were xed and 5-8 µm sections were obtained using CM 3050S cryomicrotome. From each group, several successive sections were taken for microscopic observation. For in situ detection of ROS in the liver, dihydroethidium was used. To compare the oxidative stress in liver tissues, ROS levels were imaged using dihydroethidium (Ex=588 nm and Em=615 nm). Non uorescent dihydroethidium is oxidized by ROS to yield red uorescent product. The images were then captured using a uorescence microscope (Nikon, Tokyo, Japan), 10x objective, equipped with DFC 300 FX digital camera [14] .
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2

Evaluating DNA Damage in A2780 and CP70 Cells

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A2780 and CP70 cells (5.0×10 4 cells/well in 12-well plates with coverslips) were added in BD or afatinib or the combination of BD and afatinib for 48h. After that, cells were xed with 4% paraformaldehyde and then permeabilized in 0.5% Triton X-100 for 30 minutes. Subsequently the cells were blocked with 5% GS for 1h, incubated with primary antibody(53BP1) at 4°C overnight, which detected DNA damage criterion. The next day, the cells were cleaned by PBST, incubated with secondary antibody (anti-rabbit 488) for 1.5h and mounted with DAPI nally. The uorescent images were captured by using Nikon uorescence microscope (22) .
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3

Assessing Apoptosis and ROS in Zebrafish

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Acridine orange, a permeable nucleic acid-selective uorescent dye (Thermo Fisher Scienti c), was used to assess the apoptosis level of cardiomyocytes during the development of zebra sh that were exposed to different doses of isoniazid. Ten randomly selected embryos at 48 hpf were stained with AO for 30 min and washed with phosphate-buffered saline (PBS). A uorescence microscope (Nikon, Tokyo, Japan) was used for photography. ROS staining 2',7'-Dichlorodihydro uorescein diacetate (DCFH-DA; Beyotime Biotechnology, China), a permeable and sensitive probe, was used for the detection of ROS in this study. We randomly selected 10 embryos at 48 hpf and stained them for 40 min with 100 µM of DCFH-DA diluted in PBS. After this was washed out with PBS for 10 min, all groups were photographed under a uorescence microscope under a uorescein isothiocyanate channel. All steps were nished in the absence of light.
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4

Quantifying Cell Proliferation via EdU Imaging

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Cell proliferation was examined using Ye uor 488 EdU Imaging Kit (Yeasen, Shanghai, China). Cells were rst incubated with EdU at 37°C for 4 h.
After xation and permeabilization, the cells were reacted with 1 mL Click-iT reaction cocktail in darkness for 30 min. For nuclear staining, cells were incubated with DAPI. Finally, the uorescence was observed under a uorescence microscope (Nikon, Tokyo, Japan).
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5

Immunofluorescence and Western Blot Protocols

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Sections were treated with 0.3% Triton and 10% goat serum for 1 h at room temperature, then incubation overnight at 4 °C with the indicated primary antibody. Sections were then incubated with the indicated secondary antibodies at room temperature in PBS containing 10% normal goat serum for 1 h. Slices were mounted onto slides, embedded in Fluoroshield™ with DAPI, and enclosed under a coverslip. Images were acquired using a Nikon uorescence microscope or a confocal microscope equipped with a 63× (N.A. 1.25) glycerol immersion objective.
Western blot analysis 20 µg total protein per lane separated by SDS-PAGE using 12% precast polyacrylamide gels at 120 V for 90 min. Separated proteins were then transferred to polyvinylidene uoride membranes at 100 V for 2 h. Membranes were blocked with 5% BSA at room temperature for 1 h and incubated with the indicated primary antibodies overnight at 4 °C, followed by incubation with anti-rabbit or anti-mouse immunoglobulin G secondary antibody for 1 h.
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6

Immunohistochemical Staining Protocol

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Sections were permeabilized with 0.3% Triton and blocked with 10% goat serum for 1 h at room temperature, then incubated overnight at 4 °C with the indicated primary antibody. Immunolabeled sections were then incubated with the indicated secondary antibodies at room temperature in PBS containing 10% normal goat serum for 1 h. Slices were mounted onto slides, embedded in Fluoroshield ™ with DAPI, and enclosed under a coverslip. Images were acquired using a Nikon uorescence microscope or a confocal microscope equipped with a 63× (N.A. 1.25) glycerol immersion objective.
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7

Induction of Apoptosis in PC-3 Tumor Organoids

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For the generation of the PC-3 tumor organoids, cells were seeded into 96-well round-bottom ultra-low attachment plates (Corning) at 2000 viable cells per well. The PC-3 spheroids were grown in RPMI medium with 10 % FBS. The plates were incubated for 5 days at 37 °C, during which they formed spheroids. Then, the spheroids were treated with 200 μg/ml HMT for 48 h. For the apoptosis analysis, 2 μM CELL Event (Invitrogen, USA) was added to each well for 1 h. Pictures were obtained using a uorescence microscope (Nikon, Tokyo, Japan). Fluorescence intensity of caspase-3/7 was evaluated using the ImageJ software. For the calculation of uorescence intensity with ImageJ, two images of each well were analyzed and their average intensity was used for the statistical analysis.
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8

Assessing Mitochondrial Oxidative Stress

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Neuro2a cells were seeded in a 24 well plate and was allowed to attach overnight, the cells were dealt with oxaliplatin and baicalein with designated concentrations for 24 h. Then cells were stained with MitoSox Red (5 µM) for 30 min. The uorescent signal at an excitation wavelength of 530 nm and emission wavelength of 580 nm was measured by Spectramax M4, USA. Images were visualized using a uorescence microscope (Nikon, Japan) (33).
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9

Cell Proliferation and Apoptosis Assays

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A Cell-Light EdU DNA Cell Proliferation Kit (KeyGEN BioTECH, China) was carried out to evaluate cell proliferation. Brie y, cells were grown into 96-well plates. Then, cells were treated with 50 μmol/L EdU for 2 hours. Then, cells were xed using 4 % paraformaldehyde and then 1×Apollo reaction cocktail was used. Cell nuclei was stained using DAPI for 15 min. We captured the images using a uorescence microscope (Nikon, Tokyo, Japan).
Apoptosis assays PI and FITC-labeled annexin V (BD Biosciences, New Jersey, USA) staining was used to assess cell apoptosis. Cells were washed twice using PBS and resuspended using 100 μL 1× binding buffer, and then incubated with 5μL FITC-annexin V and PI with no light. Then, 400 μL 1× binding buffer was used. Within 1 hour, cells were exposed to ow cytometry analysis.
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10

Lipid Droplet Visualization Techniques

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For Oil Red O staining, cells were xed in a 4% paraformaldehyde solution for 30 min, induced with 60% Oil Red O for 30 min, and washed three times with PBS, and then the cells were visualized by phasecontrast microscope (IS-Elements software, Nikon ECLIPSE, Tokyo, Japan). Oil Red O was extracted with 100% isopropanol, and its relative concentration was determined by measuring the absorbance at 510 nm. After being xed in 4% paraformaldehyde solution for 15 min, cells were stained with Bodipy (1 μg/mL; Life Technologies, Carlsbad, CA, USA) or AdipoRed (30 μl / ml; Lonza, USA) for 20 min; the sections were washed with PBS three times for 5 min each. For nuclear visualization, DAPI (4′,6diamidino-2-phenylindole; Roche) was incubated for 10 min, then the section was rinsed with PBS. After treatment, the sections were observed under uorescence microscope (Nikon, Tokyo, Japan).
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