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4 protocols using alexa fluor 488 conjugated anti goat

1

Immunofluorescence Staining of EGFR and TNFR1

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For immunofluorescence staining, HT-29 and HeLa cells were cultured on coverslips in 12-well plates. Post treatment with the indicated reagents, the cells were fixed with 4% paraformaldehyde for 30 min at RT. Anti-EGFR (Cell Signalling, 4267S) (1:50) and anti-TNFR1 (R&D systems, AD225) (1:50) or Anti-HA (Santa Cruz, sc805) (1:50) and anti-FLAG (Sigma Aldrich, F3165) (1:50) were incorporated to each sample in immunofluorescence blocking buffer (PBS with 3% BSA, 1% saponin and 1% Triton X-100) and then incubated at 4 °C overnight. Each sample was washed thrice with PBS. Alexa Fluor 488-conjugated anti-goat (Invitrogen, A-10055) (1:100) and Alexa Fluor 594-conjugated anti-rabbit (Invitrogen, A-21207) (1:100) or Alexa Fluor 488-conjugated anti-mouse (Invitrogen, A-11029) (1:100) and Alexa Fluor 594-conjugated anti-rabbit antibodies (Invitrogen, A-21207) (1:100) were incorporated into each sample in immunofluorescence blocking buffer and incubated at RT for 1 h. The nuclei were stained with DAPI for 5 min and evaluated using LSM980 (Carl Zeiss, Oberkochen, Germany) and ZEN (blue edition) programme.
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2

Immunohistochemical Analysis of Liver Cells

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Samples were treated with Histo VT One (Nacalai Tesque, Kyoto, Japan), blocked using 0.3% hydrogen peroxide and Blocking One Histo (Nacalai Tesque) to reduce nonspecific antibody interactions. The slides were incubated with monoclonal primary antibodies against human mitochondria (H-Mit) (Abcam, Cambridge, UK), Alb, αFP, IGF, CPS-1, and HNF4α at 4°C overnight. After washing, specimens were treated with Mouse on Mouse ImmPRESS Horseradish Peroxidase (Vector Laboratories, Burlingame, CA, USA) for 1 h at room temperature and then reacted with diaminobenzidine horseradish peroxidase substrate (Vector Laboratories). Finally, the slides were visualized under a microscope (FSX 100, Olympus, Tokyo, Japan).
To confirm cell distribution in the liver after transplantation, double fluorescence staining of human Alb and H-Mit was performed. The samples were incubated overnight at 4°C with a goat antibody against human Alb (Abcam) and a mouse antibody against H-Mit; Alexa Fluor 488-conjugated anti-goat (Invitrogen) and Alexa Fluor 568-conjugated anti-mouse were used as secondary antibodies, respectively. Stained slides were analyzed using a laser fluorescence microscope.
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3

Neural Stem Cell Apoptosis Analysis

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Brains were dissected from the skull and embedded into tissue freezing medium (Optical Cutting Temperature (OCT) Compound, Fisher Healthcare) before immediately snap frozen. Five serial, coronal sections (30μm in thickness) were collected spaced 300μm apart using a cryostat (Thermo Fisher Cryostar NX50, Waltham, MA, USA). To label for neural stem/progenitor cells undergoing apoptosis, slides were fixed in 10% formalin (Fisher Chemicals, Pittsburgh, PA, USA) for 10 minutes, washed 3 times with 1X PBS, and permeabilized in 2:1 Ethanol:Acetic Acid for 10 minutes, washed 3 times in 1X PBS then incubated with 0.4% Triton X-100 for 5 minutes and washed with 1X PBS. Slides were incubated in primary antibody using block overnight at 4°C at 1:500 anti-Cx43 (Santa Cruz Biotechnology) and anti-vimentin (Santa Cruz Biotechnology, Dallas, TX, USA). Sections were washed with 1X PBS then incubated with anti-rabbit Alexa Fluor 594-conjugated and Alexa Fluor 488-conjugated anti-rabbit or Alexa Fluor 488-conjugated anti-goat (Molecular Probes, Carlsbad, CA) in block for 1h at RT.
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4

Visualizing Collagen Matrix Organization

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In order to study the type I collagen extracellular matrix organization, 60,000 fibroblasts cells were seeded in eight‐well Nunc Lab‐Tek chamber slides (Thermo Fisher Scientific Scientific, Waltham, MA, USA), grown in medium (composition as described above) supplemented with 25 μg/mL ascorbic acid. After 48 hours (2 days) or 120 hours (5 days), cells were fixed with 4% (wt/vol) paraformaldehyde (Sigma‐Aldrich), permeabilized with Triton X‐100 (0.5% (vol/vol) in PBS) and blocked with bovine serum albumin (BSA; 5% (wt/vol) in PBS). Cells were next incubated with the primary type I collagen (1/100; AB758; Merck Millipore, Burlington, MA, USA) and secondary antibodies (AlexaFluor488 conjugated anti‐goat (1:1500; Molecular Probes, Life Technologies, Carlsbad, CA, USA) diluted in 2% BSA/PBS. Nuclei were counterstained with DAPI (4′‐6′‐diamidino‐2‐phenylinodole hydroxychloride; Vector Laboratories, Burlingame, CA, USA). Stained preparations were analyzed using the Axio Observer.Z1 fluorescence microscope (Carl Zeiss Microscopy, Thornwood, NY, USA). Images were captured and processed with the Zen pro software (Carl Zeiss).
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