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6 protocols using 4 chamber slides

1

Rosemary Extract Induces CHOP Expression

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Cells were cultured in 4-chamber slides (BD Biosciences) and treated with 0 and 50 µg/ml rosemary extract for 24hrs. After treatment, cells were washed once in PBS, fixed in 4% PFA for 15 mins and permeabilized in 0.2% Triton X-100 for 30 mins on ice. After blocking with 5% BSA in PBS for 1 hr, cells were incubated with CHOP antibody for 2 hrs followed by 1 hr treatment with corresponding fluorescent labeled secondary antibody. The slides were mounted and counterstained using Vectashield mounting medium containing DAPI (Vector labs). Cell images were taken at 40X magnification using Nikon microscope.
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2

Quantifying Cardiac Fibroblast ROS Production

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The production of reactive oxygen species (ROS) was monitored with 5-(and-6)-chloromethyl-2',7'-dichlorodihydrofluorescein (CM-DCF, Life Technologies, Cat. #C6827), a ROS-sensitive fluorescent indicator, as previously described by our laboratory [1 (link)]. Briefly, cardiac fibroblasts isolated from sham and ACF rats were cultured for 36 h in a 4-chamber slides (BD Bioscience) and incubated with 4 μM CM-DCF dye solution for 20 min in a dark humidity chamber at RT. Cells were washed 3 times with 1X serum free medium at RT, chambers were removed, and slides were coverslipped with 1X serum free medium, CM-DCF images were captured using a Leica DM6000 Epifluorescence microscope at 488 nm excitation. Mean fluorescence intensity (a.u.) and background were measured using SimplePCI software. Data was expressed as net intensity.
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3

Immunofluorescent Staining of Endothelial Cells

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Cells were cultured on 4-chamber-slides (BD Biosciences, Bedford, US), fixed for 2 min in 4% PFA and incubated with the following primary antibodies: mouse-anti-human CD31 (1:50; BD Pharmingen), Prox1 (1:1000; ReliaTech). Appropriate Alexa Fluor®-conjugated secondary antibodies were used (1:200; Life Technologies).
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4

Quantifying Aurora A Kinase Inhibition

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MDA-MB-468 cells were grown on 4-chamber slides (BD Biosciences, San Jose, CA) and treated with DMSO or KW-2450. For immunofluorescent staining, cells were stained with anti-Aurora A pT288 rabbit antibody (1:250) and anti-Aurora A kinase mouse monoclonal antibody (1:250), followed by anti-rabbit Alexa Fluor 488 and anti-mouse Alexa Fluor 594 secondary antibodies. DNA was counterstained with DAPI (VECTA STAIN). Fluorescently labeled cells were visualized with a Nikon FV 1000 fluorescent microscope, and images were captured with a digital camera (Nikon). For the Aurora A assay, kinase activities of Aurora A were determined by measuring pT288 fluorescent intensity (Alexa Fluor 488) in the mitotic cells that had bipolar Aurora A spots and presented as the value relative to Aurora A fluorescent intensity (Alexa Fluor 594). A concentration–inhibition curve was generated by calculating the Aurora A kinase activities in KW-2450–treated samples relative to the DMSO-treated control, and the IC50 for inhibiting Aurora A kinase activity was determined by Prism5 software.
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5

Cellular Uptake Mechanisms of Silica Nanoparticles

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CaCo-2 cells were seeded at a density of 105 cells/well in 4-chamber slides (Falcon), grown for 24 h and left untreated or incubated with chlorpromazine 50 µM, dynasore 80 µM, methyl-beta-cyclodextrin 5 mM, nystatin 40 µg/ml, genistein 200 µM, or EIPA 75 µM for 1 h at 37 °C. To investigate the energy dependence of NP uptake, CaCo-2 cells were exposed to 200 μg/ml of 30 and 80 nm-sized fluorescent Rubipy-SiO2 NPs for 3 h at 37 or 4 °C in complete cell culture medium.
Following exposure, cells were washed 3 times in PBS, fixed with 4% (v/v) paraformaldehyde in PBS and permeabilised with 0.1% (v/v) Triton X-100 in PBS (Sigma-Aldrich, Italy) before staining with AlexaFluor 488-conjugated Phalloidin (Thermo Fisher Scientific, Italy), diluted 1:100 for 40 min at RT. The nuclei were counterstained with the Hoechst 33342 dye (Dako, Italy). After staining, the cells were washed in PBS and mounted for microscopy. Images were acquired with an Axiovert 200 M inverted microscope equipped with a ApoTome slide module and Axiovision 4.8 software (Carl Zeiss; Jena, Germany), using a 40×/1.0 objective lens.
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6

Isolation and Culture of IVD Cells

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IVDs were harvested from 10 rat spines for each series of cell culture experiments. The AF, NP and CEP were carefully dissected from thoracolumbar discs. IVD cells were isolated by sequential enzyme digestion with 0.4% Pronase (Calbiochem, La Jolla, CA, USA) for 1 hour (AF, CEP) or 30 minutes (NP), followed by 0.025% Collagenase P (Roche Applied Science, Mannheim, Germany) for 3 hours (AF), 30 minutes (NP) or 1 hour (CEP) in a 5% CO2, 95% air incubator at 37 °C. Following enzyme digestion, the suspension was filtered through a 40-μm mesh (BD Falcon, Franklin Lakes, NJ, USA) for AF cells or 70-μm mesh for NP and CEP cells. The filtered cells were first washed with Dulbecco’s modified Eagle’s medium and Ham’s F-12 medium (DMEM/F12; Gibco, Palo Alto, CA, USA) and primary culture was begun. Isolated cells were cultured in monolayer in 4-chamber slides (BD Falcon) for immunohistochemical analysis at 1.4 × 104 cells/mL or 6-well tissue culture plates (BD Falcon) at 4.0 × 104 cells/mL, with 5% CO2, 95% air in complete medium (DMEM/F12 containing 10% fetal bovine serum (FBS; Biological Industries, Kibbutz Beit Haemek, Israel), 25 μg/mL ascorbic acid (Sigma-Aldrich) and 50 μg/mL gentamicin (Gibco)]. The medium was changed every third day. Primary cultured cells (in cumulative population doublings) were used in all the experiments conducted in this study.
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