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5 protocols using nlrp3

1

Immunohistochemical Analysis of Autophagy and Inflammation

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Antigen retrieval was performed on paraffin sections (3–5 μm) by boiling in citrate antigen retrieval buffer (pH 6.0) or EDTA buffer (pH 8.0), followed by blocking in 3% H2O2 for 15 min. The sections were then incubated with primary antibodies against LC3B (Abmart, Shanghai, China), Beclin1 (Abmart), p62 (Wanleibio, Shenyang, China), nuclear factor kappa B (NF-κB) p65 (Abmart), or NLRP3 (Wanleibio) at 37°C for 1 h and subsequently incubated with secondary antibodies (PV-9001, ZSGB-BIO, Beijing, China) according to the manufacturer's instructions. The expression levels of related proteins were scored semiquantitatively in a blind manner as the product of intensity scores (0, negative; 1, weak; 2, moderate; and 3, strong) and diffusion scores (1, 0-25% positive cells; 2, 26-50% positive cells; 3, 51-75% positive cells; and 4, >75% positive cells) [19 (link)].
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2

Intestinal Tight Junction Protein Analysis

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Jejunum tissues were homogenized at 4°C in RIPA lysis buffer which contained protease inhibitors (PMSF) (Beyotime, Shanghai, China), and concentrations were determined using a BCA assay (35 (link)). Samples were further diluted, and 5× SDS-PAGE loading buffer was added and boiled for 5 min. Equal amounts of protein (10 μg) were loaded onto 12% SDS-polyacrylamide denaturing gels before being transferred to polyvinylidene fluoride (PVDF) membranes. After blocking with tris-buffered saline Tween (TBST) containing 5% non-fat milk powder for 1 h at room temperature, the membrane was incubated overnight with diluted primary antibodies against ZO-1 (1:1,000; ABclonal, Wuhan, China), occludin (1:1,000; Selleck Chemicals, USA), claudin-1 (1:1,000; ABclonal, China), TLR4 (1:500; Proteintech, Wuhan, China), MyD88 (1:500; Wanleibio, Shenyang, China), NF-κB (1:500; Wanleibio, China), NLRP3 (1:1,000; Wanleibio, China), ASC (1:500; Santa Cruz Biotechnology, Dallas, TX, USA), caspase-1 (1:500; Wanleibio, China), IL-1β (1:500; Wanleibio, China), IL-18 (1:1,000; Wanleibio, China), and GAPDH (1:5,000; Proteintech, China). Electrochemiluminescence liquid (ECL) (Tanon, Shanghai, China) was used to detect the signal. ImageJ software was used to assess protein levels. The target protein levels were normalized to GAPDH, and the radioactivity was compared with the control group.
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3

Evaluation of Compound Effects on TXNIP, NLRP3, and Caspase Activation

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Min6 cells were plated in six-well dishes with overnight culture and then incubated with 10 μmol/L tested compounds and 300 μmol/L PA for 12 h. Total proteins of cells were lysed with RIPA lysis buffer (Boster, China) and the protein lysis was separated by SDS-PAGE and transferred from gel to PVDF membrane (Millipore, USA). Then, the membranes were blocked, stained overnight with corresponding primary antibodies and then with second antibody for 1 h. The signals of detected proteins were measured by Chemidoc Imaging System (BIO-RAD, USA). The antibody used were as follows: TXNIP (Abcam, ab188865), NLRP3 (Wanlei, Wuhan, China; WL02635), Cleaved caspase 1 (Wanlei, Wuhan, China; WL03450), Cleaved caspase 3 (CST, #9664s), GAPDH (Bioworld, Nanjing, China; AP0063).
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4

Lung Protein Extraction and Immunoblotting

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Total protein was extracted from the right lung tissues using RIPA buffer (Meilunbio, Dalian, China). Proteins were separated by 10% or 12% SDS-PAGE and then transferred to a polyvinylidene difluoride membrane (Millipore, Billerica, USA), which was blocked with 5% fat-free milk in TBST solution for 1 h at room temperature. The membranes were incubated with primary antibodies against LC3B (Abmart), Beclin1 (Abmart), p62 (Abmart), NF-κB p65 (Abmart), NLRP3 (Wanleibio), ASC (Cell Signaling Technology, Inc. MA, USA), pro-caspase1 (Abcam, Cambridge, UK), caspase1 p20 (Wanleibio), and mature-IL-1β (Wanleibio) at 4°C overnight. The membranes were washed with TBST and incubated with a secondary antibody (SA5-35571, Thermo Fisher, USA) at room temperature for 70 min. Immunoreactive images were detected using the Odyssey system (LI-COR Biosciences, USA) and analyzed using the ImageJ software.
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5

Western Blot Analysis of Inflammatory Proteins

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We collected protein in FLS and synovial tissues using RIPA (Beyotime, China) lysis buffer with 1% protease inhibitor cocktail (Beyotime, China). Protein concentration was determined by the BCA kit (Beyotime, China). Then we took 20 ~ 30 μg protein supernatant mixed with upper sample buffer (Beyotime, China), boiled 10 min. Samples after 10% SDS-polyacrylamide gel electrophoresis transferred protein to PVDF membrane by wet transfer (200 mA, 50 ~ 60 min). PVDF membranes were immersed in a blocking solution containing 5% skim milk powder and blocked for 2 h at room temperature. After drift, they were then incubated overnight for 4 ℃ using PLCL1 antibody (1: 2 000) (Abcam, UK), IL-6 antibody (1: 2 000) (Bioworld, China), IL-1β antibody (1: 2 000) (Wanleibio, China), NLRP3 (1: 2 000) (Wanleibio, China), Caspase-1/Cleaved Caspase-1 antibody (1:1 000) (Wanleibio, China), β-actin antibody (1: 2 000) (Bioss, China), then incubated with secondary antibody (1: 2 000) (Bioss, China). Finally, the enhanced chemiluminescence kit (Thermo Scientific, USA) was used to display the protein bands. The expression of protein was quantified by ImageJ software.
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