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Firefly luciferase reporter gene assay kit

Manufactured by Beyotime
Sourced in China, Switzerland, United States

The Firefly Luciferase Reporter Gene Assay Kit is a laboratory tool designed to quantify the activity of firefly luciferase, a widely used reporter gene. The kit provides the necessary reagents and protocols to measure luciferase activity in cell lysates or other biological samples.

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48 protocols using firefly luciferase reporter gene assay kit

1

Yeast Luciferase Reporter Assay

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Yeast was cultured in SD media at 30 °C to OD = 0.4, collected by centrifugation at 3000g for 5 min, and then transferred to SGR media. The yeast was cultured in SGR media at 30 °C to OD = 1, collected by centrifugation, and washed three times with ice-cold PBS. The collected yeast was homogenized in cold PBS, and the protein concentration was measured by the BCA kit (Thermal). Approximately 10 μg protein was used to test the luciferase activity by Firefly Luciferase Reporter Gene Assay Kit (Beyotime, #RG027); fluorescence intensity was measured for 10 s by the fluorescence microplate reader. In order to avoid the error caused by the difference in the amount of samples, the reporter gene of Renilla luciferase was used as an internal reference.
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2

Regulation of ST6GALNAC5 by GATA2

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Intron 1 of ST6GALNAC5 gene containing the putative GATA2 binding motif (CGATA) was cloned into pGL3-Basic vector (Promega, Madison, WI) as the ST6GALNAC5-Luc reporter, while the GATA2 binding motif was mutated to CTTTA as described previously [20 (link)], using Mut Express II Fast Mutagenesis Kit V2 (C214-02; Vazyme). The primers were listed in Additional file 1: Table S1. 293 T cells in 24-well plates were co-transfected with reporter plasmid (100 ng) and pCDH-4xHA-GATA2 plasmid (0, 25, 50, or 100 ng) using Lipofectamine 2000 reagent (Invitrogen), according to the manufacturer’s instructions. 48 h later, the reporter activity was detected by Firefly Luciferase Reporter Gene Assay Kit (RG005; Beyotime, Shanghai, China). Total protein amount of each sample was used for normalization. Experiments were performed in triplicate.
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3

Optimized CRISPR-dCas9-VPR System

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DNA primers were ordered from Sangon Biotechnology (Shanghai, China). Escherichiacoli strain DH5α was obtained from MiaolingBio (Wuhan, China). SpCas9 nuclease, Phanta Max Super-Fidelity DNA Polymerase, Hiscript III RT SuperMix for quantitative polymerase chain reaction (qPCR), T7 High Yield Transcription Kit, iTaq Universal SYBR Green Supermix and miRNA 1st Strand cDNA synthesis kits were purchased from Vazyme (Nanjing, China). Lipofectamine 3000 was purchased from ThermoFisher (USA). Plasmid DNA was extracted using the Plasmid mini-prep kit (Vazyme), and PCR amplicons were purified using the DNA gel extraction kit or the PCR product purification kit (Sangon Biotechnology). T4 ligase and restriction enzymes were purchased from New England Biolabs. Vectors of pJ23119, pU6, pCMV and pACYC plasmids were obtained from Addgene. The HEK293T-dCas9-VPR was prepared through lentivirus infections as described in our previous work (26 (link)). Trizol reagent was purchased from Ambion (USA). The firefly Luciferase Reporter Gene Assay Kit was purchased from Beyotime (China). The Annexin V-FITC/PI apoptosis detection kit was purchased from BestBio (China). Venetoclax was purchased from MedChemExpress (MCE). Other reagents were obtained from Sangon Biotechnology, unless otherwise indicated.
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4

Constructing YAP Promoter Luciferase Reporter

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To construct the core region of YAP promoter, the region of YAP was amplified by PCR from the human cDNA of A549 cells and were inserted into the upstream of the pGL3-Basic vector (Promega, Madison, WI, USA) via KpnI and XhoI sites to generate YAP luc. Thereafter, we use the Firefly Luciferase Reporter Gene Assay Kit (Beyotime, RG005) to detect the promoter activities. The PCR primers were:
YAP forward primer: 5′-GGTACCCATCAATGCCGGCTCA-3′.
YAP reverse primer: 5′-CCGCTCGAGTCCCTCCAACTCC-3′.
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5

Evaluating Iron Chelator Toxicity on Tachyzoites

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A total of 1 × 103 tachyzoites of RH-Luc strains were inoculated into HFFs grown in 96-well plates using DMEM containing gradient diluted iron chelating agents DFO (Topscience, Shanghai, China) or iron supplements of ammonium iron(II) sulfate (Aladdin, Shanghai, China). Dimethyl sulfoxide (DMSO, M&C Gene, Beijing, China) was used as a control. After 72 h of culture, the relative luminescence units (RLU) were measured using a fluorescence microplate reader (Tecan, Spark 10M, Männedorf, Switzerland) and Firefly Luciferase Reporter Gene Assay Kit (Beyotime Biotech, Shanghai, China). The inhibition rate was calculated using the formula: inhibition rate = [(RLUDMSO − RLUexperimental group)/RLUDMSO] × 100%. Nonlinear regression curve fitting was employed to determine the median lethal concentration (IC50) and 95% confidence interval (CI). Three independent experiments were performed.
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6

Identifying miR-203 Target Gene PRC1

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microRNA.org prediction website was used for the analysis of the target gene of miR-203. The bioinformatics was applied to predict the target binding site of miR-203 and PRC1 gene. Synthesized primers were obtained from Shanghai GeneChem (Shanghai, China). The WT vector was constructed as follows: amplified 3′ UTR sequence of PRC1 was cloned and inserted in pmiR-RB-REPORT vector digested by restrictive endonuclease XhoI/NotI. The MUT vector was constructed with WT vector used as a template. MUT primers were designed and two mutation subsections were obtained by PCR, and lastly the products of PCR were purified and cleaved by restrictive endonucleases XhoI/NotI, which were harvested and inserted into pmiR-RB-REPORT vector. The generated PRC1-MT or PRC1-MUT plasmid was co-transfected with miR-203 mimic into SCL-1 cells (Guangzhou Jennio Biotech, Guangdong, China), followed by luciferase activity detection at 560 nm with the use of a Firefly Luciferase Reporter Gene Assay Kit (RG005, Beyotime Biotechnology, Shanghai, China) and a microplate reader (MK3, Thermo Fisher Scientific, Waltham, MA, USA). The miScript target protectors were modified RNA oligonucleotides complementary to specific target sites that could not bind to other sequences.39 (link)
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7

Evaluating NF-κB and AP-1 Regulation

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1×104 BV2 cells were seeded in 24-well plates, and transfected with lentivirus NF-κB and AP-1 reporters (QIAGEN, Hilden, Japan) for 24 h and then screened with puromycin (2.5 μg/ml) to obtain BV2 cell lines stably expressing NF-κB and AP-1 reporter elements. Subsequently, BV2 cells stably expressing NF-κB and AP-1 reporter elements were treated with LPS (100 ng/ml) with or without RRx-001 (5 μM). After treatments, the activities of NF-κB and AP-1 promoters were detected with Firefly Luciferase Reporter Gene Assay Kit (Beyotime Biotechnology, Shanghai, China) at 560 nm by using Luminoskan™ Ascent (Thermo Fisher Scientific, Waltham, United States).
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8

Luciferase Assay of SLUG 3'UTR

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SLUG and SLUG‐Mut 3′UTR were amplified and cloned into the GV272 vector with an SV40‐Luc‐MCS element and Xbal/Xbal restriction site (GeneChem). Pre‐miRNAs and DNA plasmids were cotransfected using Lipofectamine 3000. Luciferase activity was measured 24 hours after transfection using a Firefly Luciferase Reporter Gene Assay Kit (Beyotime).
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9

TFBS Functional Analysis via Luciferase Assay

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The PCR primers used in the present study to clone predicted TFBS and flanking sequences are shown in Table S1. PCR was performed using standard conditions from total genomic DNA, and the PCR fragments were gel purified prior to cloning. Next, the fragments were ligated to the pGL3 plasmid backbone (Cat. No. E1751. Promega Corporation, USA) downstream of the luciferase gene open reading frame.
Aliquots of 2 × 105 exponentially growing cells were seeded into 24-well plates. Following overnight culture, cells were co-transfected with recombinant pGL3 plasmids containing TFBS, forkhead box M1 (FOXM1) overexpression plasmids, and the Renilla luciferase plasmid (pRL, as an internal control. Cat. No. E227A. Promega Corporation, USA) at a ratio of 5:5:1 by using Lipofectamine 2000® . Cell lysates were collected 48 h after transfection. Firefly and Renilla luciferase activities were measured with Firefly Luciferase Reporter Gene Assay Kit (Cat. no. C0526; Beyotime Institute of Biotechnology, China).
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10

Hepatocyte Luciferase Assay Protocol

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After treatment of primary hepatocytes, the cells were collected and lysed with a Firefly Luciferase Reporter Gene Assay Kit (RG005, Beyotime), and the luminescence of the extracted samples was detected with a GloMax 20/20 (Promega, USA).
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