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11 protocols using fluorescein conjugated secondary antibody

1

Quantifying Immune Cell Populations in Colon Tissue

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Paraffin-embedded colon tissue sections were cut into 4-μm-thick sections. Sections were deparaffinized in xylene and rehydrated sequentially in 100, 95, and 80% ethanol solutions; antigen retrieval was carried out using 10 mM citrate buffer (Sigma-Aldrich). After washing, the sections were blocked with a blocking buffer containing 1% bovine serum albumin in PBST for 30 min. The sections were incubated overnight at 4 °C with antibodies against FOXP3 (1:50; Santa Cruz Biotechnology) or CD3 (1:50; Santa Cruz Biotechnology). After three washes, the slides were incubated with secondary antibody. The colon sections, stained with an antibody against either FOXP3 or CD3, were washed three times and incubated with fluorescein-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology) or Texas red-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology) for 1 h at room temperature in the dark. Colon sections, stained with antibodies against either FOXP3 or CD3, were washed three times and mounted in VECTASHIELD mounting medium containing 4′,6-diamidino-2-phenylindole (DAPI; Vector Laboratories, Burlingame, CA). The samples were observed using an EVOS FL microscope (Life Technologies, Darmstadt, Germany), and the immuno-reacted cells were counted in 20 random fields per group.
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2

Immunofluorescence Imaging of Aortic Tissues

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Frozen aortic roots sections or macrophages were fixed in 4% paraformaldehyde for 15 min and permeabilized in 0.2% Triton X‐100 for 15 min. After blocking with 10% goat serum, the tissue sections or macrophages were indicated with primary antibodies at 4°C overnight. After washing with PBS for 3 times, tissue sections or macrophages were incubated with fluorescein‐conjugated secondary antibodies (Santa Cruz Biotechnology) for 2 h at room temperature. The cell nuclei were stained by incubation with 4, 6‐diamidino‐2‐phenylindole (DAPI, Bioss, Woburn, MA, USA). The fluorescence was detected and photographed by confocal microscopy (Olympus, Tokyo, Japan). The fluorescence intensity was quantified with ImageJ software, and relative fluorescence intensity was calculated as the targeted fluorescence intensity relative to the DAPI fluorescence intensity. Besides, the co‐localization analysis was performed using co‐localization plug‐in for ImageJ after converted the individual fluorescent channel images to 8‐bit grayscale.
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3

Immunofluorescence Analysis of Mitotic Spindle

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Morphologic changes in the mitotic spindles, centromeres, and chromosomes of the liver cancer cells were detected through immunofluorescence staining, which was performed as previously described [8 (link)]. Primary antibodies against α-tubulin (1:100, Sigma-Aldrich) or γ-tubulin (1:100, Sigma-Aldrich) were used. Cells were then incubated with fluorescein-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology, Inc.) for 1 h. Nuclei were counterstained with 0.5 μg/mL 4′,6-diamidino-2-phenylindole (DAPI) for 15 min. Images were captured using a confocal microscope (Leica TCS SP2, Wetzlar, Germany).
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4

Immunofluorescence Staining of M2 Macrophages

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RAW 264.7 cells cultured on coverslips were fixed using 4% paraformaldehyde (in PBS, pH 7.2) at room temperature for 15 min and then washed with DPBS 4 times. The cells were then incubated in a blocking buffer containing 1% bovine serum albumin in PBST for 30 min. The cells were then incubated with antibodies against CD206+ and CD11b+ at 4 h for 12 h. The cells were rinsed with DPBS 3 times and were incubated with corresponding fluorescein-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology) or Texas red-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology) for 1 h at room temperature in the dark. The coverslips were then washed 4 times and mounted using VECTASHIELD mounting medium containing 4′,6-diamidino-2-phenylindole (Vector Laboratories, USA). The slides were observed under an EVOS FL microscope (Life Technologies, Germany), and the stained cells in 20 random fields per group were counted.
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5

Immunofluorescence Analysis of Apoptosis Markers

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Cells were fixed by 4% paraformaldehyde for 15 min, permeabilized with 0.1% Triton X-100 for 5 min and blocked with 5% bovine serum albumin (BSA) for 1 h. The samples were stained with primary antibodies against AIF (Santa Cruz Biotechnology, Santa Cruz, CA), p-Akt (pS473, Epitomics, Burlingame, CA), MnSOD, catalase, NQO1, Hmox1, Bad and Bax (abcam, Cambridge, MA) at a concentration of 1:100 overnight at 4°C, and then incubated with fluorescein-conjugated secondary antibodies (Santa Cruz Biotechnology) at 37°C for 30 min. The cells were then counterstained with 4’,6-diamidino-2-phenylindole (DAPI, Sigma-Aldrich). All staining was examined under a confocal laser-scanning microscope.
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6

Cardiac Fibroblast Phenotypic Characterization

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Following treatment, cardiac fibroblasts were washed in PBS, fixed with 10% formaldehyde solution 10 min at room temperature, and permeabilized with 0.1% Triton X-100 PBS 10 min at room temperature. Then cells were blocked in 5% BSA solution at room temperature followed by 4°C overnight incubation with primary antibodies (Vimentin, a-SMA, Fibroblast specific protein 1, Troponin T, CD31 and MRTF-A: Abcam, Cambridge, MA, USA). After washing three times with 0.1% Tween-20 PBS, these cells were incubated with appropriate fluorescein–conjugated secondary antibodies (Santa Cruz Biotechnology) for 2 hours at room temperature, followed with nuclear staining by Hoechst 33258 pentahydrate 1 µg/ml (Invitrogen, Eugene, Oregon, USA). The fluorescence was examined and photographed using Leica fluorescence microscope.
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7

Immunofluorescence Imaging of Post-MI Fibrosis

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Heart tissues obtained seven days post-MI were dehydrated in 30% sucrose PBS solution and embedded in Tissue-Tek OCT compound (Sakura Finetek USA, Inc., Torrance, CA, USA) and snap frozen in drikold. Frozen tissue sections (6.0 µm thick) were fixed in 4% paraformaldehyde, permeabilized in 0.2% Triton X-100, blocked with 5% goat serum, followed by 4°C overnight incubation with primary antibodies (Collagen I: ab 292 Abcam, Cambridge, MA, USA) followed by incubation with respective secondary antibodies. After three time washing with 0.1% Tween-20 PBS, frozen slide were incubated with appropriate fluorescein–conjugated secondary antibodies (Santa Cruz Biotechnology) for 2 hours at room temperature, followed with nuclear staining by Hoechst 33258 pentahydrate 1 µg/ml (Invitrogen, Eugene, Oregon, USA). The fluorescence was examined and photographed using Leica fluorescence microscope.
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8

Visualizing Mitotic Spindle Dynamics

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Morphologic changes in the mitotic spindles, centromeres, and chromosomes of the liver cancer cells were detected through immunofluorescence staining, which was performed as previously described [8] . Primary antibodies against α-tubulin (1:100, Sigma-Aldrich) or γ-tubulin (1:100, Sigma-Aldrich) were used. Cells were then incubated with fluorescein-conjugated secondary antibodies (1:200; Santa Cruz Biotechnology, Inc.) for 1 h. Nuclei were counterstained with 0.5 µg/mL 4',6-diamidino-2-phenylindole (DAPI) for 15 min. The images were captured using a confocal microscope (Leica TCS SP2, Wetzlar, Germany).
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9

Visualizing Autophagy in PAECs

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The PAECs were fixed with 4% paraformaldehyde for 15 min at room temperature and washed with 0.1 M PBS three times. Next, the PAECs were permeabilized with 0.1% Triton X-100 (Sigma-Aldrich; Merck KGaA) and washed with 0.1 M PBS three times. Cells were blocked with 10% normal donkey serum (Sigma-Aldrich; Merck KGaA) for 20 min at room temperature. The PAECs were incubated with the primary antibody against LC3B (dilution, 1:100; cat. no. sc-376404; Santa Cruz Biotechnology, Inc.) overnight at 4°C and then incubated with the fluorescein-conjugated secondary antibody (dilution, 1:200; cat. no. sc-516102; Santa Cruz Biotechnology, Inc.) for 1 h at 37°C. Following washing three times with 0.1 M PBS, cells were administered with 4′,6-diamidino-2-phenylindole (Santa Cruz Biotechnology, Inc.) for 10 min and then washed three times with 0.1 M PBS. Cells were imaged by confocal fluorescence microscopy (×20 magnification) (Olympus Corporation).
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10

Immunofluorescence Analysis of Corneal Markers

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Mouse eyeballs were excised and snap-frozen in Tissue-Tek OCT compound at 2 or 3 days after levobunolol, atenolol, or ICI 118, 551 treatment. The frozen sections (7 μm) were fixed in 4% paraformaldehyde for 15 min, permeabilized with 0.1% Triton X-100 for 15 min, and then blocked with 5% BSA for 1 h at room temperature. The sections were then incubated with anti-CK3 (Abcam, Cambridge, MA), anti-CK14 (Abcam), anti-CK19 (Proteintech, Chicago, IL), anti-Ki67 (Abcam), anti- phosphorylated epithelial growth factor receptor (pEGFR, Abcam), or anti-phosphorylated extracellular signal-regulated kinase 1/2 (pERK1/2, Cell Signaling Technology, Danvers, MA) overnight at 4 °C and subsequently incubated with fluorescein-conjugated secondary antibody (Santa Cruz Biotechnology, Santa Cruz, CA) for 1 h, followed by 4′, 6-diamidino-2-Phenylindole (DAPI, Solarbio, Beijing, China) staining for 5 min. All stainings were observed through an Eclipse TE2000-U microscope (Nikon, Tokyo, Japan) and were quantified by Image J software. Firstly, the images were put on, then, which were conversed to 8 bit and adjusted to gray scale followed by measuring parameters including the area, mean gray value (Mean), integral optical density. Finally, we got average gray scale of these images which were used to statistically analyze.
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