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5 protocols using peroxidase conjugated affinipure goat anti rabbit igg

1

Antibody and Reagent Procurement for Cell Study

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Peroxidase-conjugated affinipure goat anti-rabbit IgG was purchased from Proteintech, United States. Rabbit monoclonal anti-LC3 antibody, anti-β-tubulin and anti-Rab5c were purchased from Abcam, United States. Hoechst 33342 and Rap were purchased from Sigma-Aldrich. The fluorescent label, Alexa Fluor 647 and 4% paraformaldehyde were purchased from Invitrogen. The lipophilic dye, DiO was purchased from Biotium, United States. The SGIV polyclonal anti-MCP antibody was prepared in our laboratory. The labeled si-EcRab5c sequence is listed in Supplementary Table 1, and was synthesized by GenePharma, China.
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2

Clathrin Light Chain Mutant Construction

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Hoechst 33342 and Pitstop 2 were purchased from Sigma-Aldrich. Pitstop 2 were dissolved in dimethyl sulfoxide (DMSO) according to the manufacturer’s instructions. The lipophilic dyes DiO and DiD were purchased from Biotium. The fluorescent dyes Alexa Fluor 647 and Alexa Fluor 488 phalloidin were purchased from Invitrogen. anti-β-tubulin was purchased from Abcam (USA). peroxidase-conjugated affinipure goat anti-rabbit IgG were purchased from proteintech (USA).
Using the primers listed in Table 1, the full-length CLCs were constructed in vectors including pcDNA3.1-flag, pEGFP-N3, and pmDsRed-C1 (Invitrogen). Site-directed mutants, including EaCLCa-W119R and EaCLCb-W122R, were all subcloned into the pEGFP-N3, pmDsRed-C1 and pcDNA3.1-flag vectors using specific primers (Table 1) and the Fast Mutagenesis Kit V2 (Vazyme). Tryptophan (W)119 of CLCa and W122 of CLCb were both replaced with arginine(R). In addition, the pEGFP-Rab5 vector was maintained in our laboratory. The constructed plasmids were confirmed by sequencing.
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3

Cyclophilin B Antibody Reagents and Techniques

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The antibodies used in this study were anti-Cyclophilin B polyconal rabbit antibody (Abcam), PE-Cy5 conjugated rabbit anti-Cyclophilin B antibody (Bioss), anti-β-actin (Proteintech), Peroxidase-conjugated Affinipure Goat Anti-Mouse IgG (Proteintech) and Peroxidase-conjugated Affinipure Goat Anti-Rabbit IgG (Proteintech). CsA were purchased from Sigma. PolyATtract® mRNA Isolation Systems was purchased from Promega. PCR-Select™ cDNA Subtraction Kit and Advantage cDNA PCR Kit & Polymerase Mix were obtained from Clontech. X-treme GENE HP DNA Transfection Reagent and X-treme GENE siRNA Transfection Reagent were purchased from Roche.
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4

Immunoblotting analysis of STAT proteins

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Immunoblotting analysis was performed as described previously (Kamat et al., 2013 (link)). Briefly, approximate 100 mg frozen lung tissue powder (n = 5 in each group) was lysed in 1 mL RIPA buffer containing 100 mM PMSF to extract pulmonary total proteins. The protein concentration was determined using a bicinchoninic acid (BCA) protein assay kit (Beyotime, China). Equal amount of proteins (10 μg) were separated by 10% SDS-PAGE and transferred onto PVDF membrane (BioRad). The blots were blocked with 5% (w/v) skimmed milk in TBST (50 mM Tris–HCl, 150 mM NaCl, 0.1% Tween- 20, pH 7.5) for 2 h. Then blots were incubated with primary antibodies overnight at 4°C. Subsequently blots were incubated with the horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 h at 37°C. After ECL substrates were added, the blots were analyzed using light imaging system (Tanon 5200, China). Before each step, the blots were washed five times for 5 min with TBST.
In this study, β-actin (Proteintech) was determined as an internal control of the western blot. The primary antibodies were activator of transcription 1 (STAT1) (Beyotime Biotech, China), STAT3 (Wanleibio, China), p-STAT1 Y701 (Cell Signaling Technology) and p-STAT3 Y705 (Cell Signaling Technology). All secondary antibodies were peroxidase-conjugated affinipure goat anti-rabbit IgG (Proteintech).
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5

Chondrocyte Differentiation Assay

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Human NP cells were seeded into 24-well plates and allowed to expand to near confluence. At this point, cells were incubated with CoPP (10 μM) in the presence or absence of IL-1β (10 ng/mL) for 15 days, with replacement of medium and treatment every 4 days. Cells were fixed with 4% formaldehyde in PBS for 30 min at 4 °C and rabbit anti-collagen type II polyclonal antibody (1:100 dilution) (Proteintech) was used to examine the expression of collagen type II. Peroxidase-conjugated affinipure goat anti-rabbit IgG (1:1000 dilution) (Proteintech) was used as the secondary antibody.
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