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3 protocols using mg115

1

Measuring Cellular Viability under AZC and MG115

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To measure viability of dividing cells in response to AZC (Sigma-Aldrich), cultures were grown in the presence of varying concentrations of AZC. Two days after plating, cells were harvested and cell numbers were calculated. To measure cell viability, the total number of cells was compared with cells with no AZC added. To measure viability of quiescent cells in response to AZC, cells were treated with varying concentrations of AZC and after 5 days of treatment, viability was measured using trypan blue (Thermo Fisher) exclusion. To measure exclusion, 100 μl of a 0.4% trypan blue solution was added to 100 μl of cells, and the resulting mixture was loaded onto a hemacytometer. To calculate cell viability, the number of blue cells was divided by the total number of cells. For each species, the experiment was conducted for three biological replicates. For each biological replicate, measurements were made for four technical replicates and the average cell viability was calculated.
To measure viability of quiescent cells in response to AZC and MG115 treatment, mouse and naked mole rat cells were cultured as described above and treated with 5 μM of MG115 (Abcam) for 24 h before treating with varying concentrations of AZC. The media was changed every day with fresh MG115 and AZC. After 5 days of AZC treatment, cells were harvested and viability was determined as described above.
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2

Screening Potential SARS-CoV-2 Inhibitors

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We purchased
HEK293T/17 cells from ATCC; DMEM with high glucose
with GlutaMAX supplement, fetal bovine serum, 0.25% trypsin-EDTA,
phenol red, puromycin, Lipofectamine 3000, and dimethyl sulfoxide
from Thermo Fisher Scientific; linear polyethylenimine MW 25000 from
Polysciences; RealTime-Glo annexin V apoptosis and a necrosis assay
kit from Promega; an EndoFree plasmid DNA midi kit from Omega Biotek;
antimycin a from Sigma-Aldrich; GC376 from Selleck Chem; boceprevir,
calpeptin, MG-132, telaprevir, and carmofur from MedChemExpress; ebselen
from TCI; calpain inhibitors II and XII from Santa Cruz Biotechnology;
MG-115 From Abcam; tideglusib, disulfiram, and PX-12 from Cayman Chemical;
chloroquine diphosphate from Alfa Aesar; hydroxychloroquine sulfate
from Acros Organics; and a fluorogenic MPro substrate DABCYL-Lys-Thr-Ser-Ala-Val-Leu-Gln-Ser-Gly-Phe-Arg-Lys-Met-Glu-EDANS
termed as Sub3 from Bachem. K777 was a gift from Prof. Thomas Meek
at Texas A&M University. The syntheses of MPI1–9 and 11a
were shown in a previous publication.15 (link)
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3

Comparing Senescence in Quiescent Cells

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Mouse and naked mole rat cells were grown to quiescence at the appropriate conditions as described earlier (32°C for naked mole rat and 37°C for mouse). Upon reaching quiescence, cells were shifted to either 32°C or 37°C and allowed to acclimate for 4 days.
Upon acclimation, cells were treated with 5 µM MG115 (Abcam). After 1, 2, and 4 days, cells were harvested and frozen prior to further analysis. Western blot analyses were conducted using an anti-ubiquitin antibody as described above.
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