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18 protocols using polyvinylidene difluoride membrane

1

Western Blot Analysis of Protein Markers

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The protein was isolated using RIPA buffer (Solarbio, Beijing, China), and then the concentration was detected with a BCA kit (Thermo Fisher). The protein samples were separated via SDS-PAGE and transferred to polyvinylidene difluoride membranes (Solarbio). After blocking in 5% fat-free milk, the membranes were interacted with primary and secondary antibodies (Abcam, Cambridge, MA, USA), including anti-CyclinD1 (ab134175, 1:10,000 dilution), anti-Bcl-2 (ab196495, 1:500 dilution), anti-Cleaved caspase-3 (Cleaved-casp-3) (ab2302, 1:200 dilution), anti-Vimentin (ab137321, 1:3000 dilution), anti-N-cadherin (ab76057, 1:1000 dilution), anti-E-cadherin (ab227639, 1:100 dilution), anti-IRS2 (ab134101, 1:1000 dilution), GAPDH (ab22555, 1:5000 dilution) and IgG conjugated via HRP (ab205718, 1:8000 dilution). GAPDH acted as a loading control. After exposing to ECL reagent (Thermo Fisher), the protein blots were visualized, and next tested via Image J software (NIH, Bethesda, MD, USA).
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2

Western Blot Analysis of ANO1 Protein

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RAW264.7 cells were lysed in the ice-cold protein extraction buffer (Solarbio) for total protein isolation. The concentrations of protein were detected using a bicinchoninic acid assay kit (Thermo Fisher). The protein was mixed with loading buffer with a final concentration of 2 mg/mL and denatured at 100°C for 10 min. Next, 10-μL protein samples in triplicate were loaded onto sodium dodecyl sulfate-polyacrylamide gels, electrophoresed, and transferred onto polyvinylidene difluoride membranes (Solarbio). The membranes were blocked with 5% blocking buffer for 1 h and then incubated with primary antibodies against ANO1 (ab72984, 1: 1000 dilution, Abcam, Cambridge, UK) overnight and horseradish peroxidase-conjugated IgG (secondary antibody; ab6721, 1: 10 000 dilution) for 2 h. β-Actin (ab8227, 1: 3000 dilution, Abcam) was the loading control. The protein bands were visualized with ECL western blotting substrate (Solarbio) and exposed to X-ray films in the dark. The relative protein level of ANO1 was assessed by QuantityOne (Bio-Rad, Hercules, CA, USA). The entire experiment was performed 3 times.
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3

Protein Extraction and Detection

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After treatment, cells were washed with ice-cold PBS and harvested in buffer (Beyotime) containing protease inhibitors (Beyotime). Extracted proteins were resolved with SDS-PAGE and electrophoretically transferred onto polyvinylidene difluoride membranes (Solarbio Science and Technology, Beijing, China). Proteins were probed with specific antibodies as previously described.
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4

Protein Extraction and Western Blot Analysis

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WB analysis was performed as previously described.57 (link) Briefly, protein was extracted from frozen tissues or cells by using radioimmunoprecipitation assay (RIPA) lysis (Beyotime, Beijing, China) supplemented with a protease inhibitor cocktail (Roche, Shanghai, China) at 4°C for 30 min. Then, samples were centrifuged at 12,000 rpm at 4°C for 10 min, and the supernatants were retained as protein lysates. The protein lysates were mixed with ¼ vol of 5× sodium dodecyl sulfate sample buffer and boiled for 10 min. For immunoblotting, 60 μg of protein lysates was separated by 10%–12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis, transferred to polyvinylidene difluoride membranes (Solarbio, Beijing, China), blocked with 5% (w/v) skim milk in Tris-buffered saline-Tween 20 (TBST) for 2 h at room temperature, incubated with primary antibodies overnight at 4°C, and then followed by incubation with secondary antibody for 2 h at room temperature. Enhanced chemiluminescence chromogenic substrate (Millipore, Billerica, MA, USA) was used to visualize the bands, and the intensity of the bands was quantified by Image Lab software (Bio-Rad, Hercules, CA, USA).
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5

Western Blot Analysis of p21 and Survivin

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Cells were washed with ice-cold phosphate-buffered saline (PBS) at 72 h after transfection and lysed with RIPA Buffer (Pierce, MA, USA). Cell lysates were clarified by centrifugation at 12000×g for 30 min at 4℃ and protein concentrations were determined by using the BCA protein assay reagent (Pierce, MA, USA). Cell lysates were added to sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) sample buffer, separated by SDS-PAGE and electrophoretically transferred to polyvinylidene difluoride membranes (Solarbio, Beijing, China). The membrane was detected with anti-p21 or antisurvivin antibodies (1:500; Bioworld Technology, Nanjing, China) and incubated at 4℃ overnight. Next, primary antibodies were removed and the membrane was detected by horseradish peroxidase-conjugated goat anti-rabbit IgG secondary antibody (1:10000; Bioworld Technology, Nanjing, China) and enhanced chemiluminescence detection (ECL System, Pierce, MA, USA).
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6

Western Blot Protein Analysis Protocol

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Total protein from cells or tissue was extracted using a protein extraction kit (Vazyme, Nanjing, China). Nuclear and cytoplasmic proteins were extracted according to the instructions of the Nuclear and Cytoplasmic protein extraction kit (Sangon Biotech, Shanghai, China). The protein was separated by SDS–PAGE (5–12%), transferred onto polyvinylidene difluoride membranes (Solarbio, Beijing, China) and blocked in 10% nonfat milk in TBST for 2 h at RT. The membranes were successively incubated with primary antibodies overnight at 4 °C. Following three washes with TBST, the membranes were then incubated with secondary antibodies at RT for 2 h. After three washes, the membranes were subjected to chemiluminescence using Clarity Western ECL Substrate (Affinity, Changzhou, China). β-actin and Lamin B1 were used as standard proteins for cytoplasmic and nuclear proteins, respectively. Protein expression was detected using an enhanced chemiluminescence detection system (ImageQuant LAS 4000 mini, USA). Antibody information is provided in Table S1.
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7

Immunoblotting Analysis of Cell Signaling

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Cells of logarithmic phase growth were plated in 50ml culture bottle. After incubated with DMEM for 24h, the cells were treated with Hcy or/ and NaHS at different concentrations for 48 h. Then the treated cells were resuspended in 100 uM cell lysis buffers and PMSF incubation on ice for 30 min. The supernatant was collected after centrifuged at 12,000 rpm for 10 min at 4˚C. The protein concentrations were detected by BCA method (Solarbio, Beijing, China). Equal amounts of total protein extracts were electrophoresed through 10% or 12% SDS-PAGE gel, then transferred to polyvinylidene difluoride membranes (Solarbio, China). After blocked with TBST (50 mM Tris-HCl, pH 7.4, 0.15 M NaCl, 0.1% Tween-20) containing 5% BSA (Sigma, USA) for 2 h, the membranes were incubated with primary antibodies including monoclonal antibody for P16INK4a, P21CIPL, and SIRT1(dilution, 1:1,000) at 4˚C overnight. After washed with TBST for 5 min 5 times, the membranes were incubated with secondary antibodies including Goat anti-rabbit (Proteintech, USA) (dilution, 1: 5,000) at room temperature for 2 h. After washed for three times with TBST for 3 times, the membranes were visualized with Western Blotting Chemiluminescence Reagent (Solarbio, Beijing, China), followed by apposition of the membranes with autoradiographic films (Kodak, China). The expression of β-actin for each sample was used as a control.
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8

Compound-Taxus Cytotoxicity in Liver Cancer Cells

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Smmc7721 and Bel7402 cells were seeded into 6-well plates and treated with Compound-Taxus-containing serum for 24 h. As was described by other studies [24 ], cells were collected and lysed with radioimmunoprecipitation assay lysis buffer, and protein concentrations were detected using the BCA method. Equal amounts of protein (30 μg/lane) were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred onto polyvinylidene difluoride membranes (Solarbio). After blocking with 5% nonfat milk at RT for 1 h, the filters were incubated with specific primary antibodies at 4 °C overnight. The next day after washing and incubating with horseradish peroxidase (HRP)-conjugated secondary antibodies at RT for 1 h, the immune complexes were visualized by the electrochemiluminescence system. Immunoblots were quantified by ImageJ and the intensity levels were normalized to the internal control Glyceraldehyde-3-phosphate dehydrogenase (Gapdh).
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9

Protein Extraction and Western Blot Analysis

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As for cells and tumor tissue, protein was extracted using RIPA lysis buffer (P0013E, Beyotime, Shanghai, China) on ice. The protein concentrations were determined by the BCA Protein Assay Kit (P0012, Beyotime, Shanghai, China) according to the manufacturer’s instructions. After boiling for 10 min at 98 °C, protein samples with loading buffer were loaded for electrophoresis with an appropriate voltage for 3 h.
The gels were transferred onto polyvinylidene difluoride membranes (Solarbio, Beijing, China) at 300 mA for complete protein transfer. The membranes were blocked with 5% skim milk and then incubated with primary antibodies at 4 °C overnight. After being rinsed 3 times with PBST, the membranes were incubated with horseradish peroxidase (HRP)-conjugated anti-rabbit/mouse IgG (Zhongshanjinqiao, Beijing, China) for 1 h at room temperature. The immunoreactive bands were visualized by the ECL chemiluminescence system (Bio-Rad, CA, USA) after spreading SuperSignal West Pico Chemiluminescent Substrate (Thermo Fisher Scientific, MA, USA) for a few seconds.
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10

Western Blot Analysis of SQLE Protein

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Collected cells were lysed in RIPA buffer (Solarbio, Beijing, China) for 30 min on ice and centrifuged at 14,000 xg for 10 min for collecting the total protein samples. Next, the samples were separated by 10% sodium dodecyl sulphate-polyacrylamide gel electrophoresis. Resolved proteins were transferred to polyvinylidene difluoride membranes (Solarbio, Beijing, China). The membranes were blocked in 5% skim milk for 2 h and then incubated overnight with an anti-SQLE rabbit polyclonal antibody (1:1000; Proteintech, Wuhan, China) at 4 °C. The next day, the membranes were incubated with a secondary antibody. Finally, according to the manufacturer’s instructions, an enhanced ECL luminescence detection kit (Vazyme, Nanjing, China) was used to observe the protein bands on the membranes.
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