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4 protocols using nkp44 pe

1

Phenotyping of HSPC-derived NK Cells

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HSPC-NK cell phenotype was determined by staining for CD56-PE-Cy7 (Biolegend, #318318), NKG2A-APC (Beckman Coulter, #A60797), CD16-FITC (Biolegend, #302006), pan-KIRs-PE (Biolegend, #339506, 312606 and 312708), DNAM-1-FITC (BD, #559788), NKp46-PE (Biolegend, #331908) and NKG2D-APC (Biolegend, #320808) (CellGro vs NK MACS) or CD56-BV510 (Biolegend, #318340), CD45-BV421 (Biolegend, #368522), NKG2A-PE-Cy7 (Beckman Coulter, #B10246), DNAM-1-FITC (Biolegend, #337104), NKp46-PE (Biolegend, #311908), NKp44-PE (Biolegend, #325108), NKp30-APC (Biolegend, #325210) and NKG2D-APC (Biolegend, #320808) (GMP validations runs). Briefly, 200.000 cells were washed using PBS/0.5% BSA and incubated with antibodies in PBS/0.5% BSA at 4 °C for 30 min. Cells were then washed twice with PBS/0.5% BSA and resuspended in PBS/0.5% BSA containing Sytox Blue (1:5000 diluted, invitrogen, #S34857) for CellGro vs NK MACS experiments or 7-AAD (1:1000 diluted, Sigma, #A9400) for GMP validation runs. Cells were acquired on the Gallios (CellGro vs NK MACS) or Navios (GMP validation runs) flowcytometers and analyzed using Kaluza V2.1.3.
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2

Multiparametric Analysis of CAR-NK Cells

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All samples were stained with anti-CD56-APC, anti-CD3-FITC (Biolegend) and 7AAD (BD Biosciences). Transgene expression was detected by flow cytometry on 7AAD CD56(-APC)+ CD3(-PE) cells (Biolegend). For NK-cell receptor detection, samples were stained with DAPI, CD56-BV711, CD16-BV786, NKp30-AF647, NKp44-PE, NKp46-BV421 (Biolegend), NKG2D-APC (BD Biosciences), and NKG2A-PE (Miltenyi Biotec). CD3-BV650 and CD19-APC-Cy7 (Biolegend) markers were used as a gating exclusion strategy for the NK cell staining. Receptor expression was assessed on DAPI CD56(-BV711)+ CD3(-BV650) cells. To detect CAR-expression, cells were incubated with 2 μl Siglec2(CD22)-Fc chimera (50 mg/ml, R&D) for 30 min at 4°C, washed and stained with anti-Fc-PE (Jackson Immune).
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3

Phenotypic Analysis of Ex Vivo Activated NK Cells

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EA NK cells at day +12 of culture were counted and 1 x 106 cells were stained at 4°C for 20 minutes with anti-human antibodies including Ghost Red-780, CD3-FITC, CD16-PE-Cy5, CD56-BV510, CD45-BV570, NKG2D-PE-Cy7, NKp30-AF647, NKp44-PE, and/or NKp46-PE-Cy7 (Biolegend, San Diego, CA). Separate tubes were incubated with PMA/ionomycin for 4 hours, washed, and then analyzed for CD3-FITC, CD56-BV421, CD45-BV510, and gamma interferon (IFNγ)-AF647 or Granzyme B-AF647. Samples were run on the MACSQuant Analyzer (Miltenyi Biotec), MQD files were converted to FCS files using MACSQuantify™ Software (Miltenyi Biotec) and analyzed using FlowJo (FlowJo, Inc, Ashland, OR).
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4

NK Cell Surface Receptor Expression

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After co-culture, we evaluated the expression of NKp30, NKp44, NKp46, and NKG2D in NK cells by FC. First, NK cells were stain for viability using LIVE/DEAD Fixable Near-IR, after that NK cells were harvested, resuspended in PBS, and stained with CD56-APC, NKp30-PE, NKp44-PE, NKp46-PE, or NKG2D-PE (BioLegend); subsequently, the cells were incubated in the dark for 30 min at room temperature. Cells were washed and fixed with paraformaldehyde 1%. An appropriate isotype and FMO controls were utilized to adjust for background fluorescence, and results are reported as the % of expression or geometric Mean fluorescence intensity (MFI). For each sample, at least 10,000 events were acquired in a FACSAria I cell sorter (BD Bioscience). Data were processed with FlowJo ver. X.0.7 software (Tree Star, Inc.).
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