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7 protocols using anti hif 1α

1

Tumor Protein Expression Analysis

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The western blot was used to observe the expression of NF-κB, STAT3, hypoxia-inducible factor 1-alpha (HIF-1α), and vascular endothelial growth factor (VEGF) in tumor microenvironment. The inoculated tumor was resected and treated with a lysis buffer solution (20 mM Tris-HCl, pH 7.5, 2 mM ATP, 5 mM MgCl2, 1 mM dithiothreitol) and protease inhibitor cocktail (Sigma-Aldrich, Saint Louis, MI, USA), in order to obtain tumor proteins. The sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was applied for the western blot. Murine anti-NF-κB (Bio-Rad, Hercules, CA, USA), anti-NF-κB p65 phospho S536 (Abcam, Cambridge, UK), anti-STAT3 (Santa Cruz, Dallas, TX, USA), anti-p-STAT3 (Santa Cruz, Dallas, TX, USA), anti-HIF-1α (Bioss, Woburn, MA, USA), and anti-VEGF (Bio-Rad, Hercules, CA, USA) antibodies were used to label tumor proteins. The tumor proteins were also treated with the Pierce BCA protein assay kits (Thermo Fischer, Waltham, MA, USA), and their absorbance was measured at the wavelength of 550 nm.
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2

Cellular Signaling Regulation Assay

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Cell culture reagents, BK, kallidin, anti-B2R and anti-β-actin were purchased from Sigma Aldrich (Merk Millipore, Darmstadt, Germany). Fasitibant was kindly provided by Menarini Ricerche, Florence, Italy. Anti-VEGF, anti-FGF-2 was from Merk Millipore (Darmstadt, Germany). Anti-HIF-1α was from Bioss (Aurogene, Rome, Italy).
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3

Western Blot Analysis of Retinal Proteins

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We extracted total protein from pulverized retinal samples and cell culture lysates which were mixed with RIPA buffer (Thermo Fisher Scientific, Inc.) with 1% PMSF. The concentration of total protein was tested with the BCA Protein Quantification Kit (Beyotime Biotechnology, Shanghai, China). After thermal denaturation (at 100°C for 10 min), the protein samples were run on 10% or 12% SDS-PAGE gels. Thereafter, the separated protein bands were transferred to PVDF membranes which were further blocked with 5% skim milk powder for two hours at room temperature. To identify specific protein expression, the membranes were incubated with specific primary antibodies (anti-NLRP3: 1:500, Abcam; anti-ASC: 1:500, Bioss, Beijing, China; anti-caspase-1: 1:1000, Bioss; anti-IL-1β: 1:1000, Bioss; anti-HIF-1α: 1:500, Bioss; anti-VEGF: 1:500, Bioss; anti-β-actin: 1:1000, Bioss) at 4°C overnight for sufficient reaction. Then, horseradish peroxidase labeled second antibodies (1:10,000, ZSGB-BIO, Beijing, China) were used to form the protein–antibody complexes that were inspected with the enhanced chemiluminescent assay. Protein band intensities were normalized to β-actin.
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4

Immunofluorescence Analysis of HIF-1α and HIF-2α

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The sections were incubated with blocking reagent (Beyotime Biotechnology, Shanghai, China) for 1 h. Brain sections and lung sections from each mice group were incubated with the following primary antibodies: anti-HIF-1α (1:200, Bioss, Beijing, China), anti-HIF-2α (1:200, Bioss, Beijing, China), at 4°C overnight. The sections were then incubated with secondary antibodies (1:5,000, Proteintech, Wuhan, China) at 37°C for 1 h after a thorough wash. The nuclei were stained with DAPI (Solarbio, Beijing, China) and placed at room temperature for 5 min. Anti-fluorescence quenching agent (Solarbio, Beijing, China) was added to seal the tablet and was observed under fluorescence microscope.
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5

Synthesis and Labeling of miR129

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SiO2 and Cerium nitrate was prepared by RuiXi Materials Tech Co. (Xian, China). Anti-IFI6, Anti-HIF-1α was purchased from Bioss Co. (Beijing, China). Anti-SSBP1 was purchased from FineTest Co. (Wuhan, China). miR129 was purchased from GenePharma Co. (Shanghai, China), sense strand: CUUUUUGCGGUCUGGGCUUGC, antisense strand: AAGCCCAGACCGCAAAAAGUU. The end of miR129 is modified by NH2 group and has green fluorescence.
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6

Nanomedicine-Enhanced Plaque Regression in Rabbits

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Forty‐two plaque‐bearing rabbits were randomly assigned to the control, LIFU, PFP–HMME@PLGA/MnFe2O4–Ram, PFP@PLGA/MnFe2O4–Ram + LIFU, PFP–HMME@PLGA/MnFe2O4 + LIFU, and PFP–HMME@PLGA/MnFe2O4–Ram + LIFU groups (n = 7 per group). On day 28 after treatment, the rabbits were sacrificed, and the right femoral arteries containing advanced plaques were harvested and cut into three segments. H&E, Prussian blue, Oil Red, and Masson's trichrome staining were performed. For immunohistochemical staining, the sections were stained with the following primary antibodies: anti‐CD31 (1:20; Abcam, Cat#ab9498), anti‐RAM‐11 (1:1200, Dako, Cat#M0633), anti‐HIF‐1α (1:200, Bioss, Shanghai, China; Cat#bs‐0737R), and anti‐α‐actin (1:2000, Sigma, Cat#A2547), followed by HRP‐conjugated secondary antibodies (1:250; Life Technologies, Carlsbad, CA, USA). All antigens were detected using standard peroxidase antiperoxidase techniques and diaminobenzidine substrate chromogens. All histopathological parameters and endothelialization scores were quantitatively measured, as previously described.[16, 35]
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7

Western Blot Analysis of TA Muscle Proteins

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TA muscle tissue samples were lysed in an ice-cold mixture of RIPA lysis buffer and protease inhibitor cocktail (Solarbio, Beijing, China) for 30 min. The lysate was then centrifuged (12,000 g, 10 min, 4 °C) and the supernatant was collected. The protein concentration of each supernatant was determined by the BCA protein assay (Beyotime, Shanghai, China). Each protein sample (28 μg) was then separated by 12.5 % SDS-PAGE and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Burlington, MA, USA). Next, 5 % non-fat milk dissolved in Tris-buffered saline containing Tween-20 (TBST) was used to block non-specific binding for 1.5 h. Next, the membranes were incubated overnight at 4 °C with a range of primary antibodies: anti-SLC7A11 (1:1000, Abcam, Cambridge, UK), anti-Gpx4 (1:1000, Abcam, Cambridge, UK), anti–HIF–1 α (1:2000, Bioss, Beijing, China) and anti-GAPDH (1:10000, Cell Signaling Technology, Danvers, MA, USA). The following day, appropriate anti-rabbit secondary antibodies (1:1000, Proteintech, Chicago, USA) were incubated with the sections at room temperature for 1.5 h. Positive signals were then detected with an enhanced chemiluminescence detection system (Millipore, Burlington, MA, USA) and the target bands were analyzed by Image J 1.53 software (National Institute of Mental Health, USA).
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