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388 protocols using fluo 3 am

1

Measuring Intracellular Calcium Dynamics

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[Ca2+]i was measured by fluorescence-activated cell sorting (FACS) using Fluo-3-loaded cells (Fluo-3AM, Molecular Probes, Oregon). HL-60 cells were resuspended to a density of 2.5 × 105/mL in PBS containing 13 μM Fluo-3AM and 8% pluronic acid F-127 (Molecular Probes, Oregon, USA) and were incubated for 25 min at 37°C. For treatments with BAPTA-AM (Molecular Probes, Oregon), cells were incubated for 30 min with the Ca2+ chelator before incubation with Fluo-3AM. Extracellular Fluo-3AM was removed by washing the cells twice. Finally, the cells were adjusted to a density of 6.25 × 104/mL and resuspended in Ca2+-free buffer to evaluate the role of [Ca2+]i. Ca2+ signal was measured with the flow cytometer for 20 seconds to establish a baseline Ca2+ level. Subsequently, cells were exposed to different experimental conditions, and the Ca2+ signal was measured for up to 3 min. Ionomycin (0.1 μg/μL) and phorbol myristate acetate (PMA) (10 nM) (Sigma-Aldrich Chem. Co., St. Louis, USA) were used to verify the specificity of the signal. Assessment of [Ca2+]i was performed at room temperature by flow cytometry (FACS Calibur, Becton Dickinson) using the CellQuestPro software (BD Bioscience) and analysed with FlowJo v7/8 (Tree Star Inc., Ashland, OR).
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2

Quantifying Intracellular Calcium Levels

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Free [Ca2+]i was determined using Fluo-3/AM (F1242; Life Technologies, Waltham, MA, USA USA). Cells in 96-well plates (3603; Costar) were exposed to silica NPs for 6 h and incubated with 3.5 μM Fluo-3/AM at 37 °C for 1 h. Then the cells were washed with HBSS and the fluorescence intensity was measured using a full-wavelength multifunction scanning reader (Varioskan Flash; Thermo Scientific) with excitation at 485 nm and emission at 525 nm. The intensity of the control well was set at 100% and the data are presented as percentages of control. For the inhibitor experiments, cells were pretreated with 5 mM SA (A7631; Sigma, USA) for 1 h before incubation with NPs. Each group had 5 replicate wells and all procedures were performed in the dark.
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3

Cytosolic Calcium Monitoring in Human Macrophages

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Human macrophages were loaded with 1.25 μm Fluo3-AM (Thermo
Fisher) for 30 min at room temperature in loading buffer containing 150 mM NaCl,
5 mM KCl, 1 mM MgC12, 1 mM CaC12, 20 mM HEPES, 10 mM
glucose, 1× PowerLoad (Thermo Fisher) to solubilize the Fluo3-AM dye, and
2.5 mM probenecid (Thermo Fisher) for dye retention. Fluo3-AM was then removed,
and the cells were chased in loading buffer without PowerLoad and probenecid for
30 min at room temperature. Cytosolic Ca2+ was monitored by flow
cytometry (FACSCanto II) or with a Nikon A1 confocal microscope.
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4

Intracellular Ca2+ Dynamics Regulated by pCBs

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The effects of the pCBs on intracellular Ca2+ release that was induced by TRPV1 activation was determined using the selective intracellular fluorescent probe Fluo-3 AM (Molecular probes, Eugene, OR, USA). The HaCaT cells (1 × 106 cells) were loaded for 15 min at 25 °C with 4 µM of Fluo-3 AM, which contained 0.02% Pluronic F-127 (Molecular probes) in an OPTIMEM medium, and then they were washed in the Tyrode’s buffer (145 mM of NaCl, 2.5 mM of KCl, 1.5 mM of CaCl2, 1.2 mM of MgCl2, 10 mM of D-glucose and 10 mM of HEPES; pH 7.4), resuspended in 2 mL of the Tyrode’s buffer and transferred into the quartz cuvette of the LS50B spectrofluorometer (Perkin Elmer, Waltham, MA, USA). Fluorescence was measured at 25 °C (excitation at λ = 488 nm; emission at λ = 516 nm) from the HaCaT cells, which had been pre-incubated with each pCB (6.0 µM of CBG, 4.0 of µM CBC, 9.0 µM of THCV and 13.0 µM of CBGA) and then stimulated with the selective TRPV1 agonist capsaicin (1 µM), as reported in [64 (link)]. The TRPV1-mediated intracellular Ca2+ elevation was expressed as fluorescence intensity (arbitrary units, AU) per 106 cells.
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5

Fluo-3/AM and YC3.6 Fluorescence Imaging

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For Fluo-3/AM staining, fresh pistils were excised with a razor and immediately placed in 10 mM MES buffer or 10 mM MES buffer containing 20 μM Fluo-3/AM (Molecular Probe, USA). After 5 h incubation at 4°C in the dark, the samples were washed with fresh Fluo-3/AM-free MES buffer before microscopic examination. Fluorescence from the pistils loaded with Fluo-3/AM was detected at 488 nm (excitation) and 520 nm (detection) under a laser scanning confocal microscope (ZEISS LSM 700).
For YC3.6 fluorescence observation, the UBQ10::YC3.6 transgenic plants [38 (link)] were crossed with the wild type 9311 and the sss1-D mutant, respectively. The pistils of the wild type plants and the homozygous mutants in the F2 populations were excised with a razor and observed directly at 458 nm (excitation) and 525 nm (detection) under a laser scanning confocal microscope (ZEISS LSM 700). ZEN microscope and imaging software were used to measure the mean fluorescence intensity.
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6

Intracellular Calcium Dynamics in Oocytes

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Oocytes from different treatment groups at 0, 8, 12, and 24 h during IVM were washed three times with a washing medium [DPBS with 3 mg/ml of bovine serum albumin (BSA)]; after which, they were incubated in a washing medium with 5 μM Fluo-3/AM (Invitrogen/Molecular Probes, Carlsbad, CA, United States) for 30–40 min in the dark at 39°C in 5% CO2 and humidified air and washed three–five times to remove the Fluo-3/AM. Oocytes were allocated to 6-μl drops of DPBS under mineral oil and were ultimately observed using a Live Cell Imaging System (Nikon A1, Nikon, Tokyo, Japan). The [Ca2+]i of oocytes was detected 10 times at intervals of 20 s using the fluorescence intensity of the laser at 488 nm (F488), and results were analyzed with software from NIS-Elements (Nikon, Tokyo, Japan).
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7

Intracellular Calcium Imaging with Fluo-3/AM

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Calcium imaging was performed with Fluo-3/AM (Invitrogen, Carlsbad, CA, USA) as described previously (9 (link)). Briefly, the intracellular calcium levels were determined using a fluorescence microscope (ECLIPSE Ti-U; Nikon, Tokyo, Japan; and Leica DMi8 inverted microscope; Leica Microsystems Ltd., Wetzlar, Germany) with the calcium-specific fluorescent dye, Fluo-3/AM (5 µM; Invitrogen, Carlsbad, CA, USA). Fluo-3/AM was mixed with 0.1% F127 in normal buffer solution (NBS: 140 mM NaCl, 5 mM KCl, 2 mM CaCl2/EDTA, 0.5 mM MgCl2, 10 mM glucose, and 5.5 mM HEPES, adjusted to pH 7.4), and loaded into the cells by incubating for 60 min at 37°C. After 60 min of incubation, the cells were washed twice with NBS and replaced with fresh NBS. Following treatment with the compounds, the alterations in the fluorescent images were recorded on a computer connected to the microscope. The excitation and emission wavelengths were 488 nm and 515 nm, respectively. The intracellular calcium levels were expressed as the F/F0 ratio, where F indicates the fluorescence intensity of the region of interest at a certain time point, and F0 indicates the initial fluorescence intensity at 0 s. Image analysis was performed using the ImageJ software (NIH), with custom-made scripts for semi-automatic cell counting, calculation of the F/F0 ratio, and image production.
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8

Intracellular Calcium Measurement in Keratinocytes

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Fluo‐3/AM (Invitrogen, Carlsbad, CA, USA), a fluorescent indicator, was used to measure intracellular calcium levels and calcium image. To assess intracellular calcium levels, cells (1 × 104 cells per well) were seeded in a black 96‐well plate (Greiner Bio‐One, Kremsmunster, Austria). Subsequently, cells were incubated with 10 µм Fluo‐3/AM for 1 h. Subsequently, the CAP patch was treated for 5‐ or 10‐min. The fluorescence intensity was detected at an excitation wavelength of 485 nm and an emission wavelength of 520 nm immediately. Intracellular calcium levels were compared to those of untreated cells, which were set at a value of one relative fluorescent unit. To investigate to Ca2+ image in keratinocytes, cells (1 × 103 cells per well) were seeded in ibidi µ‐Slide 8‐well high glass‐bottom plates: # 1.5H Schott glass. After 24 h, cells were treated with 10 µм Fluo‐3/AM (Invitrogen) for 1 h in 37 °C. Subsequently, CAP patch treatment was performed for 5 or 10 min. Next, the cells were incubated with DAPI for 2 min. Images were acquired using a Zeiss confocal laser scanning microscope (Zeiss microsystems, Germany) at 400× magnification.
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9

Quantifying Intracellular ROS, NO, and Ca2+ in Fungal Cells

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To detect intracellular ROS and NO, fungal mycelia were harvested at 0, 2, 4, 24, 48 h after incubation in glucose or Avicel medium. The harvested mycelia were stained with 20 μM 2′,7′-dichlorodihydrofluorescein diacetate (H2DCF-DA, Themo Fisher, Waltham, MA, USA) and 20 μM 4-amino-5-methylamino-2′,7′-difluorofluorescein diacetate (DAF-FM DA, Themo Fisher) for intracellular ROS and NO, respectively, at 25 °C in the dark for 1 h.
Intracellular Ca2+ was detected using the fluorescent dye Fluo3-AM (Invitrogen, Carlsbad, CA, USA). Fungal mycelia were harvested at 0, 2, 4, 24, 48 h after incubation in glucose or Avicel medium and then stained with 5 μM of Fluo3-AM (Invitrogen) at 25 °C in the dark for 1 h.
After incubation, all stained samples were washed with 1× PBS and then imaged using a FV-100 MPE spectral confocal laser scanning microscope (Olympus Corporation, Tokyo, Japan) under wavelengths corresponding to each fluorescent dye: 488/525 nm (excitation/emission) for H2DCFDA, 495/515 nm (ex./em.) for DAFFMDA, 506/526 nm (ex./em.) for Fluo3-AM.
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10

Visualizing Intracellular Calcium Dynamics

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To visualize Ca2+ levels, D3(NMP-like) cells or D8 NPs (200K cells/cm2) were differentiated as described in Fig. 1B and incubated in a mixture of Fluo3AM (Invitrogen; stock 1 mM in DMSO, delivered to cells 1 μM) at 37°C for 30 min, rinsed with neurobasal medium (Gibco) supplemented as appropriate for D3 or D8 and left to recover for 1 h. Fluo3AM was then excited at 488 nm and the fluorescence generated was imaged by Deltavision Core microscope system in a WeatherStation environmental chamber maintained at 37°C. The D3(NMP-like) and D8 NP medium was buffered with a 5% CO2/95% air mix and maintained in a humid chamber. Images were acquired using an Olympus 20×1.30 NA objective using a Xenon light source and a CoolSnap HQ2 cooled CCD camera (Photometrics). Images were deconvolved and maximum intensity projections of z-stacks were made using SoftWorx imaging software (Applied Precision). To provide a positive control for response to calcium influx, D3(NMP-like) and D8 NP cells were incubated with A23187 (Sigma C7522) 10 μg/ml in 0.1% DMSO in neurobasal medium) at 37°C for 20 min, rinsed, incubated in with Fluo3AM for 30 min and then rinsed in neurobasal medium. The fluorescence generated was imaged as above. The raw data were then quantified using ImageJ plugin Heatmap Histogram. Data and statistical analyses are presented in Fig. S7 and its legend.
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