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156 protocols using labview program

1

Cable-Driven Robotic System for Gait Analysis

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We used a customized cable-driven robotic system for this study. Specifically, the cable-driven system was mounted to a fixed aluminum frame, which was placed on both sides of a treadmill (Woodway PPS MED, Woodway, Waukesha, WI, USA). The cable-driven system included two motorized cables (stainless steel, 1.6 mm in diameter) and pullies, and the two cables were driven by two servo motors (AKM43H, Kollmorgen, Radford, VA, USA) through cable spools (Wu et al. 2011 (link)). The two cables were attached to participants’ pelvis on both sides through a waist belt. The movement of two motors was controlled by a PC using a custom-designed LabVIEW program (National Instruments, Austin, TX, USA). Two sets of custom-designed position sensors, which included two rotational potentiometers (P2201, Novotechnik, Southborough, MA, USA) and one linear potentiometer (SP-2, Celesco, Chatsworth, CA, USA), were used to measure the ankle position and pelvis position in three dimensions. The ankle and pelvis position signals were recorded through an A/D board using a custom-designed LabVIEW program (National Instruments, Austin, TX, USA), and the ankle position signal was used to trigger the pelvis perturbation force at targeted phase of gait (Figure 1).
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2

Quantifying Dynamic Stability Using Motion Analysis

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Using kinematic data from motion analysis, dynamic stability was quantified as the margin of stability (MoS, Figure 1) [17 (link),18 (link)] as follows:
MoS=d+vgl
where d = xtoexCoM (x is the anteroposterior position) and v = vtoevCoM (v is velocity) for anterior disturbances, and d = xCoMxheel and v = vCoMvheel for posterior disturbances. The COM position was calculated from kinematic data and anthropometric values [24 ]. The variable g represents gravity (9.81 m/s2) and l is the sagittal-plane distance between the mean ankle joint center location and that of the whole-body COM, calculated on a frame-by-frame basis. For the trials representing the highest disturbance magnitude in which a step was prevented, the minimum (often most-negative) MoS after disturbance onset was determined. To keep all measures unitless, the MoS was scaled to participant height. LabVIEW programs (National Instruments, Austin, TX) were developed to calculate MoS measures.
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3

Rapid-Cooling Contracture Analysis

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All force recordings were made using custom-made LabView programs (National Instruments). Confocal images were processed using ImageJ software. ktr tracings were fitted to the equation F = Fmax · (1−ektr(t)) + Finitial using Origin 7 software (OriginLab Corporation). Statistical analyses were performed with one-way ANOVA for repeated measures with Bonferroni post-hoc test or two-way ANOVA with statistical significance set at P < 0.05. All data is presented as means ± S.E.M. Muscles were excluded from the final analysis if a complete set of four rapid-cooling contractures (n = 2) and three post-rest potentiation (n = 1) experiments were not obtained.
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4

Spatiotemporal Motor Sequence Training in Rats

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We used a DLS-dependent task for rats that favors the generation of a motor sequence with fine-tuned kinematic parameters (Rueda-Orozco and Robbe, 2015 (link)). In this task, rats are trained to run on a customized treadmill to obtain rewards according to a spatiotemporal rule. Once the treadmill was turned on, animals could stop it and receive a drop of sucrose solution by entering a “stop area” located at the front of the treadmill. In addition to this spatial rule, a temporal constraint was added: stopping of the treadmill was only effective if animals waited at least 7 s (goal time) before entering the stop area. If animals entered the stop area before the goal time, an error sound was played, and they were forced to run for 20 s. Initially, rats accelerated forward as soon as the treadmill was turned on and entered the stop area before the goal time, resulting in a majority of incorrect trials. After extensive training, rats executed a stereotyped sequence that could be divided in three overlapping phases: passive displacement from the front to the rear portion of the treadmill, stable running, and acceleration across the treadmill to enter the stop area. All rats were extensively trained to the task. The behavioral apparatus was controlled with custom-made LabView programs (National Instruments, RRID:SCR_014325).
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5

Open-Skull Cranial Window Imaging with Optogenetic Stimulation

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Mice transduced by either AAV injection or in utero gene transfer were subjected to open-skull cranial window surgery, and the cranial holes were covered with bilateral glass windows. An outer cylinder (a non-bevelled 15 mm long 18G needle with an inner diameter of 0.9 mm) was implanted on the glass window for PA. Before PA, the optical fibre was inserted into the outer cylinder, and the tip of the fibre was placed directly onto the glass coverslip. The fibre and the outer cylinder were tightly locked together with Blu-Tack, which was easily removed after the PA. Photostimulation was carried out using the COME-2 series (Lucir, Osaka, Japan), which consist of 457-nm laser diodes, an optical swivel, and bilateral optical fibres (COME2-αDF1; core diameter of 500 μm, 0.5 N.A.). The laser diode was adjusted to an output of 20 mW at the tip of each fibre. The light pulse was delivered for 150 ms at 1 Hz for 1 h, and the process was controlled by customised LabView programs (National Instruments, Austin, TX).
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6

Electrophysiological Recordings with Borosilicate Glass Micropipettes

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Borosilicate glass micropipettes (AM-system, 5928, Carlsborg, Washington) were tapered using a horizontal puller (P-97, Sutter Instrument, Novato, California) to make long-shank recording electrodes with tips ~5 μm in diameter and back-filled with aCSF. Electrical signals were pre-amplified (DAM50; World Precision Instruments, Sarasota, Florida), amplified (NL106, Digitimer Ltd., Hertfordshire, England), bandpass filtered at 10–3,000 Hz (NL126, Digitimer Ltd.), and stored on a pulse-code modulation tape recorder (Neuro-Corder DR-890; Cygnus Technology Inc., Delaware Water Gap, Pennsylvania). Analog signals were digitized in real time using a National Instrument-based data acquisition system (NI-PCI-6010, National Instrument, Austin, Texas) and processed using customized LabVIEW programs (version 15.0.1.1f2, National Instrument) incorporated with MATLAB scripts (version 8.5.0 The MathWorks, Inc., Natick, Massachusetts). To avoid aliasing and sampling jitter for precise waveform alignments at spike peaks, signals were first oversampled at 40 kHz and then downsampled to 10 kHz by interpolation algorithm to keep file size small. All signals were digitally corrected for amplification gains and expressed in units of μV for computational analyses.
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7

Modeling Heart Rate Off-Kinetics After Sprint

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Heart rate off-kinetics (HR decrease after 60-m sprint) was modeled according to a mono-exponential function of time by using a Least Squares Method (minimizing the sum of squared vertical distances between experimental points and the exponential curve):
where HRbaseline is the average of HR (bpm) during the last 60 s of the recovery period; Ampl is the asymptotic amplitude for the exponential term (maximal HR values − HRbaseline, bpm); τoff is the time constant (s) of the exponential, i.e., the time from the end of the sprint to reach 27% of HR maximum excursion [which corresponds to HR = HRbaseline + Ampl (1–63%)]. The velocity of HR decays after the sprint (voff, s−1) was inferred as the reciprocal of τoff. Also, the heart rate range from the sprint start to the beginning of the off-kinetics phase (ΔHR) was calculated (Figure 1). All data have been analyzed with purposely written LabView programs (release 13, National Instruments).
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8

Performance Evaluation of TENG Device

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To investigate the output performance of the TENG, an IVCL17-56 motor was used to periodically press and release the device. Short circuit current is measured by SR570 low-noise current amplifier (Stanford Research System, Sunnyvale, CA, USA) and the output voltage is measured by NI 9215 (National Instruments, Austin, TX, USA). Data were collected using LabVIEW programs (National Instruments, Austin, TX, USA).
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9

Intracellular Bead Rheology Measurement

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The OT is installed on an inverted microscope (Eclipse Ti-E: Nikon; 1.49 NA oil-immersion 100×-objective). The near-IR 1064-nm laser beam (10 W; IPG Photonics) is expanded to overfill the back aperture of the objective. The bead position relative to the laser center is measured using a lateral effect photodiode (Thorlabs) positioned conjugate to the objective’s back focal plane. The laser is steered using two-axis AODs (AA Optoelectronic) controlled through a field-programmable gate array and custom LabVIEW programs (National Instruments). A multifrequency (∼18 frequencies) excitation input wave is applied to a single intracellularly located bead per cell. The frequencies range from 0.02 to 1300 Hz (moduli obtained from 0.02 to 500 Hz), with corresponding amplitudes ranging from ∼50 to ∼1 nm. The frequencies of oscillation are selected to avoid harmonics. The amplitudes are empirically chosen to yield a linear response from the cytoplasm. No significant harmonic generation was observed from the amplitudes applied, indicating that the measurements were performed in the linear regime (Wilhelm et al., 2011 ). Measurement are performed on beads located in the most mechanically homogeneous region of the cell, midway between the cell periphery and perinuclear region where distinct actin cytoskeleton organization exists.
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10

In Vivo Optogenetic Imaging of Spine Density

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In vivo two-photon imaging of the Fr2 area was performed from the pia to a depth of 150 μm, and the number of AS-PaRac1-Venus was calculated, among which puncta within 2-μm diameter were approximated as AS-containing spines. Gray matter volume was calculated from the imaged area, excluding the vascular lumen, and the number of AS-PaRac1-Venus puncta per 1000 μm3 was determined. Fiber sleeves (ADAL1, 2.5 mm outer diameter, Thorlabs, Newton, NJ) were placed onto the exposed skull, immediately above the bilateral frontal cortex (AP = +2.5; ML = ±1.0). Before PA, the optical fibers (BFYF4LF01; core diameter of 400 μm, 0.39 N.A.; Thorlabs) were connected to the mice via the fiber sleeves and removed after PA. Photostimulation was carried out using the COME-2 series (Lucir, Japan), which consisted of 457-nm laser diodes and an optical swivel. The laser diode was measured through the skull and adjusted to an output of 20 mW, immediately after passing through the skull. The light pulse was delivered for 150 ms at 1 Hz for 1 hour, and the process was controlled by customized LabView programs (National Instruments, Austin, TX).
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