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52 protocols using hek293t

1

Generating Pseudotyped HIV Viruses

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HEK293T, TZM-bl, and CEM-SS cell lines were obtained from the American Type Culture Collection. HEK293T and TZM-bl cell lines were maintained in Dulbecco's modified Eagle's medium and CEM-SS cell line was maintained in RPMI 1640 medium (Corning Cellgro). Both media were supplemented to contain 10% fetal calf serum (Hyclone), 100 IU/ml penicillin and 100 μg/ml streptomycin (GIBCO).
A3G-P210R mutant was generated by site-directed mutagenesis (QuickChange Lightening site-directed mutagenesis kit, Agilent Technologies) using the following primers: P210R_sense: 5’ATTCACTTTCAACTTTAACAATGAACGGTGGGTCAGAGGAC3’ P210R_antisense: 5’GTCCTCTGACCCACCGTTCATTGTTAAAGTTGAAAGTGAAT3’.
All viruses were prepared using a previously described HIV-1 vector pHDV-eGFP pseudotyped by co-transfecting with phCMV-G plasmid, which expresses vesicular stomatitis virus glycoprotein (VSV-G) [42 (link), 53 (link)–58 (link)]. Briefly, we co-transfected pHDV-eGFP (1.0 μg), pHCMV-G (0.25 μg), and either 0.34 μg or 0.67 μg of pFlag-WT-A3G or pFlag-P210R-A3G expression plasmids in the presence or absence of pcDNA-hVif using polyethylenimine (PEI) as previously described [42 (link), 53 (link)–55 (link)]. Virus-containing supernatant was clarified by filtering through a 0.45-μm filter and kept at -80°C until use.
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2

Culturing T-cell Leukemia Cell Lines

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HEK 293T, CEM, and MOLT4 cells were obtained from the American Type Culture Collection (ATCC). De-dentified patient samples were provided by Loma Linda University (Loma Linda, CA), Penn State College of Medicine (Department of Pediatrics Developmental Therapeutics and Preclinical Core (DTPC)), and Penn State Cancer Institute collected under an approved material transfer agreement (MTA) and after approval from institutional review board (IRB). CEM, MOLT4, and primary T-ALL cells were cultured or maintained in RPMI 1640 medium (Corning) supplemented with 10% fetal bovine serum (Hyclone) and incubated at 37 °C in a humidified atmosphere of 5% carbon dioxide. HEK 293T cells were cultured in Dulbecco’s Modified Eagle Medium -DMEM (CellGro) supplemented with 10% fetal bovine serum (FBS).
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3

Transfection of Cell Lines for Molecular Studies

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The cell lines HEK293T and VCaP were purchased from ATCC (Manassas, VA). BPH-1 cells were kindly provided by Dr. Donald Tindall (Mayo Clinic). HEK293T cells were cultured in Dulbecco's modified Eagle's medium (Corning cellgro) supplemented with 10% FBS (Thermo Fisher Scientific, Cat# 10437028). VCaP cells were cultured in Dulbecco's modified Eagle's medium (Corning cellgro) supplemented with 13% FBS (Thermo Fisher Scientific, Cat# 10437028). BPH-1 cells were cultured in RPMI 1640 medium (Corning cellgro) supplemented with 10% FBS (Thermo Fisher Scientific, Cat# 10437028). Transfections were performed using Lipofectatmine2000 (Thermo Fisher Scientific) or by electroporation using an Electro Square Porator ECM 830 (BTX) with Mirus Ingenio solution, following manufacturer's instructions. Approximately 75–90% transfection efficiencies were routinely achieved, verified by expression of GFP co-transfected with the plasmid(s) of interest.
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4

Cell Culture Protocols for Lung Cancer Research

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HCC827, BEAS-2B and HEK293T cells were obtained from the Cell Bank, China Academy of Sciences (Shanghai, China). H1975, H1650, A549, H1299, and PC-9 cells were purchased from the ATCC (American Type Culture Collection, Manassas, VA, USA). The BEAS-2B cell line was isolated from normal human bronchial epithelium. A549, PC-9, and HEK293T cells were cultured in Dulbecco's modified Eagle's medium (DMEM, Corning Cellgro, Manassas USA) and BEAS-2B cells were cultured in LHC-9 medium. HCC827, H1975, H1650, and H1299 were cultured in either RPMI-1640 medium. All media were supplemented with 10% fetal bovine serum (FBS, HyClone Laboratories, Logan, UT, USA), an antibiotic cocktail of 100 U/mL penicillin, and 100 μg/mL streptomycin (Gibco). Cell culture was carried out at 37˚C in a 5% CO2 humidified environment.
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5

Cell Line Cultivation Protocols

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The HEK293T (CRL-3216) cell lines were obtained from ATCC (Manassas, VA, USA). The CEM-A cell line was obtained through the NIH AIDS Reagent Program, Division of AIDS, NIAID, NIH: CEM-A from Dr. Mark Wainberg and Dr. James McMahon, CEM-CL10 [46 (link)]. Cell lines were grown at 37 C with 5% CO2. Complete growth medium for HEK293T cells was prepared by combining 10% fetal bovine serum (Corning; Corning, NY, USA), 2 mM L-glutamine (Corning), and Penicillin-Streptomycin (Corning) into Dulbecco’s Modified Eagle’s Medium (DMEM) (Corning) or for the CEM-A cell line with identical ingredients into Roswell Park Memorial Institute (RPMI) medium (Corning). Additionally, the CEM-A cell line growth medium was supplemented with 1% hypoxanthine, thymidine (HT) solution (Corning).
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6

Cell Line Culturing Conditions

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MDA-MB-231, MDA-MB-468, and HEK293T cells were purchased from ATCC. HT29 and LS180 cells were provided by Q. Liu; HCT116 cells were provided by N. Shroyer; MEF cells were generated from e12.5 embryos using standard methods (Herrera et al, 1996 (link)). MDA-MB-231, MDA-MB-468, HT29, HCT116, HEK293T, and MEF cells were cultured in DMEM (CORNING, 10-013-CV) with 10% FBS and 1% penicillin/streptomycin. LS180 cells were cultured in RPMI1640 (CORNING, 10-013-CV) with 10% FBS and 1% penicillin/streptomycin. All cell lines were routinely tested for mycoplasma contamination.
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7

Transient Transfection of Cells

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Vero-SLAM, HEK293T and EECs in six-well plates (Corning) were transfected with specific plasmids (3 µg each) with Lipofectamine 2000 (Invitrogen) according to the manufacturer’s instructions. At 6 h post-transfection, DMEM was supplemented with 1 % FBS instead of transfection medium and allowed to continue to culture for 48 h before being used for assays.
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8

Cell Culture and Transfection Protocol

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HEK293T and SH-SY5Y cells were purchased from ATCC. HEK293FT cells were from Thermo Fisher. HEK293T and HEK293FT cells were maintained in Dulbecco’s Modified Eagle’s Medium (DMEM, Corning) containing 10% fetal bovine serum (FBS) and antibiotics (penicillin/streptomycin, 10 U/ml). SH-SY5Y cells were maintained in DMEM/F12 50/50 (Thermo Fisher) containing 10% fetal bovine serum (FBS) and antibiotics (penicillin/streptomycin, 10 U/ml). All cell lines were maintained at 37 °C. Cell transfections were performed using TransIT-293 reagent (Mirus) for HEK293T or Lipofectamine 2000 (Thermo Fisher) for SH-SY5Y cells following the manufacturer’s instructions.
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9

Cultivation and Transfection of HEK293T and SH-SY5Y Cells

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HEK293T and SH-SY5Y cells were purchased from ATCC. HEK293FT cells were from Thermo Fisher. HEK293T and HEK293FT cells were maintained in Dulbecco's Modified Eagle's Medium (DMEM, Corning) containing 10% fetal bovine serum (FBS) and antibiotics (penicillin/streptomycin, 10 U/ml). SH-SY5Y cells were maintained in DMEM/ F12 50/50 (Thermo Fisher) containing 10% fetal bovine serum (FBS) and antibiotics (penicillin/streptomycin, 10 U/ml). All cell lines were maintained at 37 °C. Cell transfections were performed using TransIT-293 reagent (Mirus) for HEK293T or Lipofectamine 2000 (Thermo Fisher) for SH-SY5Y cells following the manufacturer's instructions.
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10

Culturing HCT116, DLD-1, and HEK293T Cell Lines

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The HCT116 and DLD-1 cell lines were obtained from the American Type Culture Collection (cat. numbers CCL-221 and CCL-247) while HEK293T cells were obtained from Invitrogen. HCT116 and HEK293T cells were maintained in DMEM (Corning) supplemented with 10% FBS, 5 mM L-glutamine, and 1% penicillin/streptomycin. DLD-1 cells were maintained in RPMI supplemented with 10% FBS and 1% penicillin/streptomycin. Cells were cultured in an incubator at 37°C in 5% CO2.
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