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33 protocols using juli stage real time cell history recorder

1

Comprehensive Cell Proliferation and Motility Assay

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Cell proliferation was measured using CCK8 (Dojindo, Tokyo, Japan), and JuLI™ Stage Real-Time Cell History Recorder (NanoEntek, Seoul, South Korea), the details were described previously 23 (link), 25 (link), 26 . The live cell analyzer monitored cell confluence by recording cell images at 2-hour intervals. On the first day, 2 × 105 cells were seeded in each well. During log growth phase, monitored continuously for 54 h. Cell numbers were counted by CellDrop FL Fluorescence Cell Counter (Devovix, USA).Would healing, and transwell migration analysis were performed as described previously 23 (link), 25 (link). Motility experiments were done according to our previous research 26 . Briefly, cells were harvested and resuspended at a density of 1 × 104 cells/mL in 6-well culture plates, and then images were taken continuously using JuLI™ Stage Real-Time Cell History Recorder (NanoEntek, Seoul, South Korea) for 12 hours with an interval of 15 min. The cell motility ability was quantified via Image-pro.
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2

Endometrial Cancer Cell Spheroid Coculture

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RFP-expressing endometrial cancer cell spheroids were grown by culturing 100 epithelial cells (Ishikawa RFP+ or MFE-296 RFP+) in hanging drop fashion [41 (link)] with 3% matrigel. After 72 hr, oncospheres were transferred to 90% confluent monolayer of GFP-expressing endometrial stromal fibroblast cells (HESC GFP+). Images were obtained every 24 hr using 10x objective on JuLiTM Stage Real-Time Cell History Recorder (NanoEnTek) in an incubator at 37°C and humidified 5% CO2.
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3

Matrigel-Embedded Cell Migration Imaging

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The Matrigel TM  -embedded cells and spheroids in flat-bottomed or U-bottom 96-well plates were time-lapse-imaged using a JuLI TM   stage real-time cell history recorder (NanoEntek, South Korea) placed inside an incubator ( 37C and 5% CO2 ). Using the built-in software, exposure time, brightness, and focus were adjusted for each well. Time-lapse bright-field images were obtained using the fully automated x-y-z stage, every 3 min (GA) or 5 min (GFA) for at least 24 h using a 10x objective to obtain a resolution of 440μm/pixel . The recorded images are 2D projections of a 3D migration. If a cell migrates too far away from the focal plane it is not visible anymore. The same goes if the cell migrates outside the field of view13 (link),33 (link).
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4

Imaging Oviductal Organoids Development

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Initial gross oviductal images were captured using a Nikon SMZ25 stereoscope. During organoid culture, organoid development images were taken by JuLiTM Stage Real-Time Cell History Recorder (NanoEnTek) every 3 days after media replenishment. As the organoids diffusely distribute within the Matrigel dome, images were taken on multiple focal planes through each dome at these timepoints. Immunofluorescence and H&E images were acquired using Olympus DP80 CCD (charge-coupled device) and cellSens software (Olympus) on the afore mentioned sections. Confocal laser scanning was carried out on a Zeiss LSM 900-Airyscan-2 microscope with a ×63 objective using the software ZEN (blue edition) 3.0 and were reconstructed by sequences (z-stack).
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5

3D Spheroid Formation and Proliferation Assay

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On day 0, 5×10 3 cells/well were seeded into ultra-low attachment round bottom 96-well plates (7007, Corning, Kennebunk, ME) in ice-cold 50 µL RPMI 1640 + 5% FBS containing 2.5% (v/v) Geltrex LDEV-Free Reduced Growth Factor Basement Membrane Matrix (A1413202, ThermoFisher Scienti c). The plates were centrifuged at 800×g for 10 min and placed in the cell culture incubator to allow establishment of spheroids. On day 1, 50 µL of fresh RPMI 1640 + 5% FBS was added to the plates. On day 4, 100 µL of RPMI 1640 + 5% FBS containing CB-839 at 2× the desired nal concentration was added to the spheroid plates. Images of the spheroids were captured using a 10× objective on a JuLI TM Stage Real-Time Cell History Recorder (NanoEnTek, Seoul, Korea) on day 4 and day 8. On day 7 3 H-thymidine was added to the cultures and thymidine incorporation was detected following a 16 h overnight incubation.
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6

Time-lapse Imaging of hESCs and Cardiomyocytes

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Time-lapse images of control and KDM1A depleted hESCs were captured using an optical microscope (JuLI™ Stage Real-Time Cell History Recorder, NanoEntek) equipped with a high-sensitivity monochrome CCD (Sony sensor 2/3”), an automated x-y-z stage, and a 0.3 NA/10X objective (Olympus). hESCs were plated on vitronectin in presence of E8 Medium and recorded for 72 h at 60-min interval. The growth curve rate was automatically calculated on thresholded images, by measuring the total area occupied by the whole cells using the JuLI Stage software (NanoEntek).
For real-time imaging of beating cardiomyocytes, cells were recorded with the EVOS-FL Auto 2 Cell Imaging System (Thermo Fisher Scientific). During the acquisition cells were incubated at 37°C and 5% CO2 in a controlled stage incubator. Movies were acquired with an EVOS™10 × 0.30NA/7.13WD objective (Thermo Fisher Scientific).
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7

Cell Migration Assay with ADQ

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The cells were seeded in 6-well plates (1.2 × 10 6 cells/well). The wound was made with a scratcher tip (0.5 mm; SPL Life Sciences, Gyeonggi-do, Korea) 24 h after cell seeding. Then the cells were treated with ADQ in 1% FBS media for 24 h. The wound area was observed with a JuLI Stage Real-Time Cell History Recorder (NanoEnTek Inc., Seoul, Korea). The wound closure is represented as the percent of wound recovery. All experiments were performed in triplicate.
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8

Spheroid Formation and ADQ Treatment

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SK-Hep1 cells were seeded in low-attachment 96-well plates (2000 cells/well) and incubated for 3 days. After media removal, Matrigel (3 mg/ml; BD Biosciences, Franklin Lakes, NJ, USA) was added. The plate was centrifuged at 300 g for 3 min at 4℃ and then incubated at 37℃ and 5% CO 2 overnight. The spheroids were treated with ADQ in 10% FBS media. All images were captured by a JuLI Stage Real-Time Cell History Recorder (NanoEnTek Inc., Seoul, Korea).
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9

Organoid Imaging and Analysis Protocol

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Tissue samples were imaged using bright-field (Julistage Real Time Cell History Recorder, NanoEntek Inc or AmScope IN300TC-FL optical microscope with a Canon EOS Rebel T5 digital camera) and confocal imaging (Carl Zeiss LSM-710 live cell imaging system, Zeiss). On day 2, EBs were imaged within the microwell devices, and formation efficiency was manually calculated. Day 7 organoids were analyzed for circularity and diameter from bright-field images using ImageJ (NIH). The wrinkling index of the organoids was measured from day 7 to day 20, following a protocol defined earlier [11 (link)]. On day 7 to day 20, organoid area size was also measured using ImageJ. Day 45 immunostaining images were similarly processed and measured for lumen diameter, thickness, and quantity.
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10

3D Spheroid Invasion Assay with ADQ Treatment

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SK-Hep1 cells were seeded in low-attachment 96-well plates (2000 cells/well) and incubated for 3 days. After media removal, Matrigel (3 mg/ml; BD Biosciences, Franklin Lakes, NJ, USA) was added. The plate was centrifuged at 300g for 3 min at 4 °C and then incubated at 37 ℃ and 5% CO2 overnight. The spheroids were treated with ADQ in 10% FBS media. All images were captured by a JuLI Stage Real-Time Cell History Recorder (NanoEnTek Inc., Seoul, Korea). The cross-sectional areas of spheroids were measured using ImageJ (https://imagej.nih.gov/ij/). The invading area was calculated as a ratio to the size of the spheroid at the 0 h time point; (AreaN – Area0)/Area0.
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