The largest database of trusted experimental protocols

6 protocols using mgcl2

1

Whole Cerebral Organoid X-gal Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole cerebral organoids were stored at −80 °C and, without thawing, fixed in 2% glutaraldehyde/2% formaldehyde in PBS for 10 min at room temperature. Organoids were incubated in ice-cold citrate phosphate buffer (CPB, pH 4.2) for 20 min, then incubated in X-gal working solution containing 40 mg/ml 5-bromo-4-chloro-3-indolyl-β-D-galactopyranoside (X-gal, Invitrogen, 15520-018), 20 mM K3Fe(CN)6 (Sigma-Aldrich), 20 mM K4Fe(CN)6 (Sigma-Aldrich), 0.02% IGEPAL (Sigma-Aldrich), 0.01% deoxycholic acid (Sigma-Aldrich), and 2 mM MgCl2 (Mallinckrodt) in CPB at 37 °C for 30 min to 2 h. The tissue was rinsed first with CPB and then with PBS, and imaged using a dissecting microscope.
+ Open protocol
+ Expand
2

Preparation of Biochemical Buffers and Solutions

Check if the same lab product or an alternative is used in the 5 most similar protocols
MgCl2, KOH, KCl and 3-(N-morpholino)propanesulfonic acid (MOPS) were obtained from Mallinckrodt Baker (ACS reagents). NaOH and HCl were from Carlo Erba. RbCl, CaCl2, adenosine 5′-triphosphate (ATP), 3-[(3-Cholamidopropyl) dimethylammonio]-1-propanesulfonate (CHAPS) and ethylenediaminetetraacetic acid (EDTA) were obtained from Sigma Aldrich. RNAse-free ultrapure water (Arium mini Ultrapure Lab Water, Sartorius) was used to prepare all stock solutions and buffers. Concentrations of CaCl2, MgCl2 and EDTA in stock solutions were determined by volumetric titrations using a Zn2+ standard solution and eriochrome black T indicator28 .
+ Open protocol
+ Expand
3

Comprehensive Intracellular and Extracellular Solutions

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following chemicals were used in the intracellular and extracellular solutions (for details, see Table 3 and 4, respectively): CsMeSO3 (C1426), CsCl (289329), CsOH (C8518), NaCl (7548-4400, DAEJUNG), MgCl2 (M9272), MgSO4 (6070-12, Mallinckrodt Chemicals), sodium l-glutamate (49621), KCl (P5405), CaCl2 (C7902), EGTA (E4378), MgATP (A9187), NaGTP (G8877), HEPES (H3375), citric acid (C2404), NaOH (7708-10, Mallinckrodt Chemicals), H2SO4 (339741), HCl (H1758), and d-glucose (1916-01, J.T. Baker). All chemicals were purchased from MilliporeSigma unless otherwise indicated.
+ Open protocol
+ Expand
4

Quantification of Ionic Cofactors in Biochemical Assays

Check if the same lab product or an alternative is used in the 5 most similar protocols
KCl, KOH, HCl and MgCl2 were from Mallinckrodt Baker (ACS reagents). 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid (HEPES), ethylenediaminetetraacetic acid (EDTA) tetraacid form, 3-[(3-Cholamidopropyl)dimethylammonio]-1-propanesulfonate (CHAPS), adenosine 5′-triphosphate (ATP) and adenosine 5′-(β,γ-imido)triphosphate (AMP-PNP) were from Sigma Aldrich. Dithiothreitol (DTT) was from Promega Corporation. All solutions were prepared in distilled and filtered water (MilliQ, Millipore Corporation) with no detectable RNase activity. Concentrations of EDTA and MgCl2 in stock solutions were determined by volumetric titrations employing eriochrome black T indicator and a Zn2+ standard solution (22 ).
+ Open protocol
+ Expand
5

Biomolecular Reagent Preparation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
MgCl2 (Mallinckrodt CHEMICALS, 6066-04), 100% Glycerol (Sigma-Aldrich, G5516), RNase/DNase-free UPW (Invitrogen, 10977-035), 1 M Tris–HCl pH 8.0 (Invitrogen, 15568–025), 1 M Tris–HCl pH 7.5 (Invitrogen, 15567-027), 0.5M EDTA (Invitrogen, AM9261), 1M DTT (Sigma-Aldrich, 43816), Tween-20 (Sigma-Aldrich, P1379), TBE ×10 (Fisher BioReagents, BP13334). Stock solutions of 4 M of NaCl (J.T. Baker, 0277), 3 M KCl (powder; MERCKGaA, 104936), 3 M LiCl (powder; J.T. Baker, 2370–01), 50mM ATP (Jena Bioscience, NU-1010) or 50 mM ATPgS (Jena Bioscience, NU-406) were prepared by dissolving the powders in RNase-free UPW or in UPW, treated with DEPC (Sigma-Aldrich, D5758) before use.
+ Open protocol
+ Expand
6

In Vitro Stock Reagents Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used the next stock reagents in this study, specifically for in vitro experiments: MgCl2 (powder; Mallinckrodt CHEMICALS, 6066-04), 100% glycerol (Sigma-Aldrich, G5516), RNase/DNase-free UPW (Invitrogen, 10977-035), 1 M Tris–HCl pH 8.0 (Invitrogen, 15568-025), 1 M Tris–HCl pH 7.5 (Invitrogen, 15567-027), 0.5 M EDTA (Invitrogen, AM9261), 1 M DTT (Sigma-Aldrich, 43816), TBE ×10 (Fisher BioReagents, BP13334). Stock solutions of 3 M KCl (powder; MERCKGaA, 104936) or 3 M LiCl (powder; J.T. Baker, 2370-01), were prepared by dissolving the powders in UPW and treated with DEPC (Sigma-Aldrich, D5758) before use.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!