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5 protocols using wiskostatin

1

Inhibitors of Actin Dynamics in Cell Biology

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All ligands, chemical compounds, and inhibitors used in this manuscript were cell biological grade: EGF (Sigma-Aldrich, cat# E9644), NH4Cl (Sigma-Aldrich, cat# A0171), NSC23766 (TOCRIS, cat# 2161), Casin (TOCRIS, cat# 5050), ZCL278 (TOCRIS, cat# 4794), ML141 (TOCRIS, cat# 4266), PBP10 (Calbiochem, cat# 529625), Rapamycin (Sigma-Aldrich, cat# S-015), U0126 (Sigma-Aldrich, cat# 19–147), Quercetagetin (Calbiochem, cat# 551590), Afatinib (Selleckchem, cat# S1011), 5-(N,N-Dimethyl)-amiloride hydrochloride (DMA, Sigma-Aldrich, cat# A4562), 5-(N-ethyl-N-isopropyl)-amiloride (EIPA, Cayman Chemical Company, cat# 14406), Wiskostatin (TOCRIS, cat# 4434), 187-1, N-WASP inhibitor (TOCRIS, cat# 2067), CK869 (TOCRIS, cat# 4984), CK666 (TOCRIS, cat# 3950), Cytochalasin D (TOCRIS, cat# 1233), and LY294002 (Sigma-Aldrich, cat# L9908).
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2

Actin and Microtubule Modulation Assay

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CK-666 (200μM, 1h; Sigma, SML0006), Latrunculin A (1 μM, 0–2h; Sigma, L5163), Cytochalasin D (100nM, 1–2h; Sigma, C2618), DMSO (1h; Sigma, D2650), Nocodazole (10/25 μM; Sigma, M1404). EHT1864 (20μM, 1h; Tocris), Rhosin hydrochloride (100μM, 1h; Tocris), C3 Transferase (2μg/mL, 3h; Cytoskeleton), Y27632 (10μM, 1h; Sigma), Blebbistatin (85μM, 1h; Sigma), ML141 (25μM, 1h; Millipore Sigma), Wiskostatin (10μM, 1h; TOCRIS), SMIFH2 (25 mM, 1h; Sigma), U0126 (20 μM, 1hr; 19–147, EMD Millipore), Erlotinib (1μg/ml, 1hr; SML2156, Sigma), DMSO (1h; Sigma).
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3

Knockdown of Myo1a and Vps4B in HeLa Cells

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Knockdown experiments for Myo1a and Vps4B were performed in CHMP4B-EGFP–expressing HeLa cells using Lipofectamine RNAiMax (catalog no. 13778075, Thermo Fisher Scientific). Cells were grown on 35-mm MatTek dishes or on grids placed at the bottom of these dishes overnight. They were transfected with 50 pmol of siMyo1a (SMARTpool ON-TARGETplus MYO1A siRNA, catalog no. L-008765-01, GE Dharmacon) or with 50 pmol of siVps4B (ON-TARGETplus Human VPS4B siRNA, catalog no. L-013119-00, GE Dharmacon). Transfections were performed for two rounds, each lasting for 24 hours. Cells were cotransfected with BLOCK-iT Alexa Fluor Red Fluorescent Control (catalog no. 14750100, Thermo Fisher Scientific) to ensure transfection efficiency and to identify transfected cells for photodamage experiments. Transfection experiments with RFP-LifeAct and FusionRed-Fimbrin/Pls1 were conducted similar to other transfections before live-cell microscopy. For experiments involving wiskostatin (catalog no. 4434, Tocris Bioscience), the drug was administered to the cells at 25 μM for 2 to 3 hours before photodamage experiments.
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4

Actin and Microtubule Modulation Assay

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CK-666 (200μM, 1h; Sigma, SML0006), Latrunculin A (1 μM, 0–2h; Sigma, L5163), Cytochalasin D (100nM, 1–2h; Sigma, C2618), DMSO (1h; Sigma, D2650), Nocodazole (10/25 μM; Sigma, M1404). EHT1864 (20μM, 1h; Tocris), Rhosin hydrochloride (100μM, 1h; Tocris), C3 Transferase (2μg/mL, 3h; Cytoskeleton), Y27632 (10μM, 1h; Sigma), Blebbistatin (85μM, 1h; Sigma), ML141 (25μM, 1h; Millipore Sigma), Wiskostatin (10μM, 1h; TOCRIS), SMIFH2 (25 mM, 1h; Sigma), U0126 (20 μM, 1hr; 19–147, EMD Millipore), Erlotinib (1μg/ml, 1hr; SML2156, Sigma), DMSO (1h; Sigma).
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5

Multi-color Confocal Imaging of Actin Dynamics

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Alexa 647 (A647; 20–30 μM in bathing solution, Invitrogen) and Alexa 488 dyes (A488; 20–30 μM in bathing solution, Invitrogen) were excited by a solid-state 638 nm (30 mW output) and 488 nm lasers (20 mW output) with an inverted confocal microscope (TCS SP8, Leica, Germany; original magnification, × 63/1.40 oil objective). Unless mentioned otherwise, the 638 nm laser was set at 20–25% of the maximum power and the 488 nm laser was set at 0.5–2% of the maximum power. A647 fluorescence was collected with a photomultiplier at 639–767 nm, whereas A488 was collected with a hybrid GaAsP spectral detector at 489–596 nm. For time-lapse A647/A488 imaging, images were collected with 40 ms inter-frame interval at 45–70 nm per pixel in an imaging area of ∼160–320 μm2. In some experiments, cells were pre-treated with 3 μM latrunculin A (Enzo Life Sciences), 4 μM Cyto D (Enzo Life Sciences), wiskostatin (10 μM, Tocris Bioscience) and SMIFH2 (25 μM, Tocris Bioscience) for 20 min in the bath solution, or whole-cell dialysis of phalloidin–FITC (1.3 μM, Invitrogen) for 2–3 min before imaging.
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